RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 MYRFQ9Y2G1 1151 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 INPP5FQ9Y2H2 1132 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 GDAQ9Y2T3 454 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 ZHX2Q9Y6X8 837 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 MYH10P35580 1976 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 ADAMTS13Q76LX8 1427 aa5.98□□□□□ -1.45
CD44-225ENST00000527326 SF3B1O75533 1304 aaKnown RBP eCLIP5.98□□□□□ -1.45
CD44-225ENST00000527326 PSME4Q14997 1843 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 MYH11P35749 1972 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 A0A0A0MRY4 1105 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 TRIM49BA6NDI0 452 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 CAPN8A6NHC0 703 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 C9orf172C9J069 976 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 H3BNH8 94 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 FCHO1O14526 889 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 TREHO43280 583 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 COBLO75128 1261 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 GCATO75600 419 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 SPAG6O75602 509 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 TTC4O95801 387 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 FGGP02679 453 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 ABHD2P08910 425 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 SNRPAP09012 282 aaKnown RBP5.97□□□□□ -1.45
CD44-225ENST00000527326 HSPD1P10809 573 aaKnown RBP5.97□□□□□ -1.45
CD44-225ENST00000527326 GFAPP14136 432 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 RAG1P15918 1043 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 CREB1P16220 341 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 PSMC3P17980 439 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 ACAT1P24752 427 aaKnown RBP5.97□□□□□ -1.45
CD44-225ENST00000527326 POLR2BP30876 1174 aaKnown RBP5.97□□□□□ -1.45
CD44-225ENST00000527326 RFC1P35251 1148 aaPredicted RBP5.97□□□□□ -1.45
CD44-225ENST00000527326 STAT3P40763 770 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 PTPN9P43378 593 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 PHKA1P46020 1223 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 RPL21P46778 160 aaKnown RBP5.97□□□□□ -1.45
CD44-225ENST00000527326 RGS7P49802 495 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 PEX3P56589 373 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 MRPS9P82933 396 aaKnown RBP5.97□□□□□ -1.45
CD44-225ENST00000527326 TXNL4AP83876 142 aaKnown RBP5.97□□□□□ -1.45
CD44-225ENST00000527326 TMPRSS15P98073 1019 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 ZNF200P98182 395 aaPredicted RBP5.97□□□□□ -1.45
CD44-225ENST00000527326 SCRN3Q0VDG4 424 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 TARDBPQ13148 414 aaKnown RBP eCLIP5.97□□□□□ -1.45
CD44-225ENST00000527326 DGKZQ13574 1117 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 MRPL58Q14197 206 aaKnown RBP5.97□□□□□ -1.45
CD44-225ENST00000527326 GALNT3Q14435 633 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 TRIP13Q15645 432 aaPredicted RBP5.97□□□□□ -1.45
CD44-225ENST00000527326 ASIC2Q16515 512 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 EARS2Q5JPH6 523 aaKnown RBP5.97□□□□□ -1.45
CD44-225ENST00000527326 LDLRAD1Q5T700 205 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 RNASEH2BQ5TBB1 312 aaKnown RBP5.97□□□□□ -1.45
CD44-225ENST00000527326 ANKRD26P1Q6NSI1 321 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 PPP1R2P3Q6NXS1 205 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 C16orf46Q6P387 395 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 IYDQ6PHW0 289 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 FOXR2Q6PJQ5 311 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 C15orf52Q6ZUT6 534 aaKnown RBP5.97□□□□□ -1.45
CD44-225ENST00000527326 SYDE1Q6ZW31 735 aaPredicted RBP5.97□□□□□ -1.45
CD44-225ENST00000527326 USP49Q70CQ1 688 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 MCM10Q7L590 875 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 OTOP3Q7RTS5 596 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 PCGF5Q86SE9 256 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 SETD3Q86TU7 594 aaPredicted RBP5.97□□□□□ -1.45
CD44-225ENST00000527326 TTC7BQ86TV6 843 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 NT5DC3Q86UY8 548 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 IGFN1Q86VF2 1251 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 GPBP1Q86WP2 473 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 TDRPQ86YL5 185 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 DMRTC2Q8IXT2 367 aaPredicted RBP5.97□□□□□ -1.45
CD44-225ENST00000527326 CCDC105Q8IYK2 499 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 PQLC1Q8N2U9 271 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 SLC15A4Q8N697 577 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 LHFPL5Q8TAF8 219 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 SLC26A7Q8TE54 656 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 SH3RF3Q8TEJ3 882 aaPredicted RBP5.97□□□□□ -1.45
CD44-225ENST00000527326 BCL7CQ8WUZ0 217 aaPredicted RBP5.97□□□□□ -1.45
CD44-225ENST00000527326 HSPH1Q92598 858 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 ATP2A3Q93084 1043 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 TP53INP1Q96A56 240 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 CIDECQ96AQ7 238 aaPredicted RBP5.97□□□□□ -1.45
CD44-225ENST00000527326 OMA1Q96E52 524 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 NRBF2Q96F24 287 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 RMND5BQ96G75 393 aaPredicted RBP5.97□□□□□ -1.45
CD44-225ENST00000527326 OXNAD1Q96HP4 312 aaPredicted RBP5.97□□□□□ -1.45
CD44-225ENST00000527326 TNIP3Q96KP6 325 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 CDK5RAP1Q96SZ6 601 aaKnown RBP5.97□□□□□ -1.45
CD44-225ENST00000527326 THTPAQ9BU02 230 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 EFHD1Q9BUP0 239 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 TMEM120AQ9BXJ8 343 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 FRMD8Q9BZ67 464 aaPredicted RBP5.97□□□□□ -1.45
CD44-225ENST00000527326 FOXP3Q9BZS1 431 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 DCLK3Q9C098 648 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 MUC3BQ9H195 1237 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 TRIT1Q9H3H1 467 aaKnown RBP5.97□□□□□ -1.45
CD44-225ENST00000527326 DPEP3Q9H4B8 488 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 RAD21L1Q9H4I0 556 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 RPF2Q9H7B2 306 aaKnown RBP5.97□□□□□ -1.45
CD44-225ENST00000527326 MMRN2Q9H8L6 949 aa5.97□□□□□ -1.45
CD44-225ENST00000527326 LIN28AQ9H9Z2 209 aaKnown RBP5.97□□□□□ -1.45
CD44-225ENST00000527326 WDR6Q9NNW5 1121 aaKnown RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms