RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 WDCPQ9H6R7 721 aa19.42■□□□□ 0.7
SMPD1-203ENST00000527275 ANLNQ9NQW6 1124 aa19.42■□□□□ 0.7
SMPD1-203ENST00000527275 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.42■□□□□ 0.7
SMPD1-203ENST00000527275 GPATCH2LQ9NWQ4 482 aa19.42■□□□□ 0.7
SMPD1-203ENST00000527275 SPTBN5Q9NRC6 3674 aaKnown RBP19.42■□□□□ 0.7
SMPD1-203ENST00000527275 TMEM265A0A087WTH1 108 aa19.42■□□□□ 0.7
SMPD1-203ENST00000527275 I6L893 689 aaPredicted RBP19.42■□□□□ 0.7
SMPD1-203ENST00000527275 TP73O15350 636 aa19.42■□□□□ 0.7
SMPD1-203ENST00000527275 OAS1P00973 400 aaKnown RBP19.42■□□□□ 0.7
SMPD1-203ENST00000527275 VPS41P49754 854 aa19.42■□□□□ 0.7
SMPD1-203ENST00000527275 TUBP50607 506 aa19.42■□□□□ 0.7
SMPD1-203ENST00000527275 VCPP55072 806 aaKnown RBP19.42■□□□□ 0.7
SMPD1-203ENST00000527275 ZC3H12AQ5D1E8 599 aaKnown RBP19.42■□□□□ 0.7
SMPD1-203ENST00000527275 CEP85LQ5SZL2 805 aa19.42■□□□□ 0.7
SMPD1-203ENST00000527275 ERMARDQ5T6L9 678 aa19.42■□□□□ 0.7
SMPD1-203ENST00000527275 TXNDC8Q6A555 127 aa19.42■□□□□ 0.7
SMPD1-203ENST00000527275 RFX6Q8HWS3 928 aa19.42■□□□□ 0.7
SMPD1-203ENST00000527275 TTC13Q8NBP0 860 aa19.42■□□□□ 0.7
SMPD1-203ENST00000527275 NKD2Q969F2 451 aaPredicted RBP19.42■□□□□ 0.7
SMPD1-203ENST00000527275 RNF34Q969K3 372 aa19.42■□□□□ 0.7
SMPD1-203ENST00000527275 LRCH3Q96II8 777 aa19.42■□□□□ 0.7
SMPD1-203ENST00000527275 SNRNP25Q9BV90 132 aaKnown RBP19.42■□□□□ 0.7
SMPD1-203ENST00000527275 ATXN3LQ9H3M9 355 aa19.42■□□□□ 0.7
SMPD1-203ENST00000527275 GOLGA6CA6NDK9 693 aa19.41■□□□□ 0.7
SMPD1-203ENST00000527275 LINC01565O15544 149 aa19.41■□□□□ 0.7
SMPD1-203ENST00000527275 RHOP08100 348 aa19.41■□□□□ 0.7
SMPD1-203ENST00000527275 GOLGA6DP0CG33 693 aa19.41■□□□□ 0.7
SMPD1-203ENST00000527275 EPHA5P54756 1037 aa19.41■□□□□ 0.7
SMPD1-203ENST00000527275 CYP4F8P98187 520 aa19.41■□□□□ 0.7
SMPD1-203ENST00000527275 OASLQ15646 514 aaKnown RBP19.41■□□□□ 0.7
SMPD1-203ENST00000527275 TTMPQ5BVD1 217 aa19.41■□□□□ 0.7
SMPD1-203ENST00000527275 PRPF38BQ5VTL8 546 aaKnown RBP19.41■□□□□ 0.7
SMPD1-203ENST00000527275 ALLCQ8N6M5 410 aa19.41■□□□□ 0.7
SMPD1-203ENST00000527275 OR2W6PQ8NHA6 318 aa19.41■□□□□ 0.7
SMPD1-203ENST00000527275 FAM161BQ96MY7 647 aa19.41■□□□□ 0.7
SMPD1-203ENST00000527275 SLC22A12Q96S37 553 aa19.41■□□□□ 0.7
SMPD1-203ENST00000527275 CYP2S1Q96SQ9 504 aa19.41■□□□□ 0.7
SMPD1-203ENST00000527275 CDK5RAP1Q96SZ6 601 aaKnown RBP19.41■□□□□ 0.7
SMPD1-203ENST00000527275 MAK16Q9BXY0 300 aaKnown RBP19.41■□□□□ 0.7
SMPD1-203ENST00000527275 FRMD8P1Q9BZ68 369 aaPredicted RBP19.41■□□□□ 0.7
SMPD1-203ENST00000527275 GOLGA6AQ9NYA3 693 aa19.41■□□□□ 0.7
SMPD1-203ENST00000527275 SAE1Q9UBE0 346 aaPredicted RBP19.41■□□□□ 0.7
SMPD1-203ENST00000527275 DNMT3LQ9UJW3 386 aa19.41■□□□□ 0.7
SMPD1-203ENST00000527275 TLR6Q9Y2C9 796 aa19.41■□□□□ 0.7
SMPD1-203ENST00000527275 PRUNE2Q8WUY3 3088 aa19.41■□□□□ 0.7
SMPD1-203ENST00000527275 OBSL1O75147 1896 aa19.4■□□□□ 0.7
SMPD1-203ENST00000527275 ARSEP51690 589 aa19.4■□□□□ 0.7
SMPD1-203ENST00000527275 ITGA8P53708 1063 aa19.4■□□□□ 0.7
SMPD1-203ENST00000527275 OTUD4Q01804 1114 aaKnown RBP19.4■□□□□ 0.7
SMPD1-203ENST00000527275 CAV1Q03135 178 aa19.4■□□□□ 0.7
SMPD1-203ENST00000527275 SLMAPQ14BN4 828 aa19.4■□□□□ 0.7
SMPD1-203ENST00000527275 CA9Q16790 459 aa19.4■□□□□ 0.7
SMPD1-203ENST00000527275 KLHDC10Q6PID8 442 aa19.4■□□□□ 0.7
SMPD1-203ENST00000527275 RHBDF2Q6PJF5 856 aa19.4■□□□□ 0.7
SMPD1-203ENST00000527275 GRASPQ7Z6J2 395 aaPredicted RBP19.4■□□□□ 0.7
SMPD1-203ENST00000527275 TADA2BQ86TJ2 420 aa19.4■□□□□ 0.7
SMPD1-203ENST00000527275 PRUNE1Q86TP1 453 aa19.4■□□□□ 0.7
SMPD1-203ENST00000527275 BBOF1Q8ND07 529 aa19.4■□□□□ 0.7
SMPD1-203ENST00000527275 SLC35B2Q8TB61 432 aa19.4■□□□□ 0.7
SMPD1-203ENST00000527275 ACTL9Q8TC94 416 aa19.4■□□□□ 0.7
SMPD1-203ENST00000527275 TEKT4Q8WW24 435 aa19.4■□□□□ 0.7
SMPD1-203ENST00000527275 TKTL2Q9H0I9 626 aa19.4■□□□□ 0.7
SMPD1-203ENST00000527275 PABPC3Q9H361 631 aaKnown RBP19.4■□□□□ 0.7
SMPD1-203ENST00000527275 TRPC7Q9HCX4 862 aa19.4■□□□□ 0.7
SMPD1-203ENST00000527275 LMCD1Q9NZU5 365 aa19.4■□□□□ 0.7
SMPD1-203ENST00000527275 ANAPC5Q9UJX4 755 aa19.4■□□□□ 0.7
SMPD1-203ENST00000527275 NOTCH4Q99466 2003 aa19.4■□□□□ 0.7
SMPD1-203ENST00000527275 UNC80Q8N2C7 3258 aa19.4■□□□□ 0.7
SMPD1-203ENST00000527275 ITGAVP06756 1048 aa19.4■□□□□ 0.7
SMPD1-203ENST00000527275 CDC25CP30307 473 aa19.4■□□□□ 0.7
SMPD1-203ENST00000527275 CCR1P32246 355 aa19.4■□□□□ 0.7
SMPD1-203ENST00000527275 ADRA1BP35368 520 aa19.4■□□□□ 0.7
SMPD1-203ENST00000527275 NTHL1P78549 312 aa19.4■□□□□ 0.7
SMPD1-203ENST00000527275 ADGRE1Q14246 886 aa19.4■□□□□ 0.7
SMPD1-203ENST00000527275 SLC5A9Q2M3M2 681 aa19.4■□□□□ 0.7
SMPD1-203ENST00000527275 STXBP5Q5T5C0 1151 aa19.4■□□□□ 0.7
SMPD1-203ENST00000527275 PDZD4Q76G19 769 aaPredicted RBP19.4■□□□□ 0.7
SMPD1-203ENST00000527275 MAP7D3Q8IWC1 876 aa19.4■□□□□ 0.7
SMPD1-203ENST00000527275 EFHBQ8N7U6 833 aa19.4■□□□□ 0.7
SMPD1-203ENST00000527275 CCHCR1Q8TD31 782 aa19.4■□□□□ 0.7
SMPD1-203ENST00000527275 MRPS31Q92665 395 aaKnown RBP19.4■□□□□ 0.7
SMPD1-203ENST00000527275 EXOC4Q96A65 974 aa19.4■□□□□ 0.7
SMPD1-203ENST00000527275 TCEAL4Q96EI5 215 aa19.4■□□□□ 0.7
SMPD1-203ENST00000527275 SFXN1Q9H9B4 322 aa19.4■□□□□ 0.7
SMPD1-203ENST00000527275 FZD10Q9ULW2 581 aa19.4■□□□□ 0.7
SMPD1-203ENST00000527275 AP4E1Q9UPM8 1137 aa19.4■□□□□ 0.7
SMPD1-203ENST00000527275 SLC12A8A0AV02 714 aa19.39■□□□□ 0.69
SMPD1-203ENST00000527275 MMRN1Q13201 1228 aa19.39■□□□□ 0.69
SMPD1-203ENST00000527275 DPYSL3Q14195 570 aa19.39■□□□□ 0.69
SMPD1-203ENST00000527275 KRT81Q14533 505 aa19.39■□□□□ 0.69
SMPD1-203ENST00000527275 PDK2Q15119 407 aa19.39■□□□□ 0.69
SMPD1-203ENST00000527275 TMEM184AQ6ZMB5 413 aa19.39■□□□□ 0.69
SMPD1-203ENST00000527275 MAB21L3Q8N8X9 362 aa19.39■□□□□ 0.69
SMPD1-203ENST00000527275 SMG7Q92540 1137 aaKnown RBP19.39■□□□□ 0.69
SMPD1-203ENST00000527275 SLC39A13Q96H72 371 aa19.39■□□□□ 0.69
SMPD1-203ENST00000527275 DHX35Q9H5Z1 703 aaKnown RBP19.39■□□□□ 0.69
SMPD1-203ENST00000527275 PIDD1Q9HB75 910 aa19.39■□□□□ 0.69
SMPD1-203ENST00000527275 MTCH2Q9Y6C9 303 aa19.39■□□□□ 0.69
SMPD1-203ENST00000527275 DENND4CQ5VZ89 1909 aa19.39■□□□□ 0.69
SMPD1-203ENST00000527275 GOLGA6L10A6NI86 522 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms