RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 VCANP13611 3396 aa11.14□□□□□ -0.63
NEDD8-205ENST00000527046 GRID2IPA4D2P6 1211 aa11.14□□□□□ -0.63
NEDD8-205ENST00000527046 GOLGA6L6A8MZA4 724 aa11.14□□□□□ -0.63
NEDD8-205ENST00000527046 SPECC1L-ADORA2AF8WAN1 911 aa11.14□□□□□ -0.63
NEDD8-205ENST00000527046 BUB1O43683 1085 aa11.14□□□□□ -0.63
NEDD8-205ENST00000527046 CNTN5O94779 1100 aa11.14□□□□□ -0.63
NEDD8-205ENST00000527046 PDGFBP01127 241 aaPredicted RBP11.14□□□□□ -0.63
NEDD8-205ENST00000527046 APOEP02649 317 aa11.14□□□□□ -0.63
NEDD8-205ENST00000527046 RARAP10276 462 aa11.14□□□□□ -0.63
NEDD8-205ENST00000527046 CD72P21854 359 aa11.14□□□□□ -0.63
NEDD8-205ENST00000527046 L1CAMP32004 1257 aa11.14□□□□□ -0.63
NEDD8-205ENST00000527046 CTHP32929 405 aa11.14□□□□□ -0.63
NEDD8-205ENST00000527046 MAN1A1P33908 653 aa11.14□□□□□ -0.63
NEDD8-205ENST00000527046 SLC11A2P49281 568 aa11.14□□□□□ -0.63
NEDD8-205ENST00000527046 MESDQ14696 234 aa11.14□□□□□ -0.63
NEDD8-205ENST00000527046 ALFQ53S48 1182 aa11.14□□□□□ -0.63
NEDD8-205ENST00000527046 ERMARDQ5T6L9 678 aa11.14□□□□□ -0.63
NEDD8-205ENST00000527046 SCYL2Q6P3W7 929 aa11.14□□□□□ -0.63
NEDD8-205ENST00000527046 KIAA0907Q7Z7F0 614 aaPredicted RBP11.14□□□□□ -0.63
NEDD8-205ENST00000527046 UBALD2Q8IYN6 164 aa11.14□□□□□ -0.63
NEDD8-205ENST00000527046 LGI2Q8N0V4 545 aa11.14□□□□□ -0.63
NEDD8-205ENST00000527046 CFAP52Q8N1V2 620 aa11.14□□□□□ -0.63
NEDD8-205ENST00000527046 ATP2A3Q93084 1043 aa11.14□□□□□ -0.63
NEDD8-205ENST00000527046 TMA16Q96EY4 203 aaKnown RBP11.14□□□□□ -0.63
NEDD8-205ENST00000527046 KCTD15Q96SI1 283 aaPredicted RBP11.14□□□□□ -0.63
NEDD8-205ENST00000527046 SNRNP25Q9BV90 132 aaKnown RBP11.14□□□□□ -0.63
NEDD8-205ENST00000527046 KLC2Q9H0B6 622 aa11.14□□□□□ -0.63
NEDD8-205ENST00000527046 SIK2Q9H0K1 926 aa11.14□□□□□ -0.63
NEDD8-205ENST00000527046 C11orf16Q9NQ32 467 aa11.14□□□□□ -0.63
NEDD8-205ENST00000527046 TMEM51Q9NW97 253 aa11.14□□□□□ -0.63
NEDD8-205ENST00000527046 USP18Q9UMW8 372 aa11.14□□□□□ -0.63
NEDD8-205ENST00000527046 PPP2R2CQ9Y2T4 447 aa11.14□□□□□ -0.63
NEDD8-205ENST00000527046 F5P12259 2224 aa11.14□□□□□ -0.63
NEDD8-205ENST00000527046 KIAA1549LQ6ZVL6 1849 aa11.14□□□□□ -0.63
NEDD8-205ENST00000527046 C3orf70A6NLC5 250 aaPredicted RBP11.13□□□□□ -0.63
NEDD8-205ENST00000527046 USP27XA6NNY8 438 aa11.13□□□□□ -0.63
NEDD8-205ENST00000527046 DCXO43602 365 aa11.13□□□□□ -0.63
NEDD8-205ENST00000527046 CACNG3O60359 315 aa11.13□□□□□ -0.63
NEDD8-205ENST00000527046 TULP3O75386 442 aa11.13□□□□□ -0.63
NEDD8-205ENST00000527046 LRIG2O94898 1065 aa11.13□□□□□ -0.63
NEDD8-205ENST00000527046 NFATC1O95644 943 aa11.13□□□□□ -0.63
NEDD8-205ENST00000527046 ADH5P11766 374 aa11.13□□□□□ -0.63
NEDD8-205ENST00000527046 TYRP14679 529 aa11.13□□□□□ -0.63
NEDD8-205ENST00000527046 GLULP15104 373 aa11.13□□□□□ -0.63
NEDD8-205ENST00000527046 COMTP21964 271 aa11.13□□□□□ -0.63
NEDD8-205ENST00000527046 HOXC13P31276 330 aa11.13□□□□□ -0.63
NEDD8-205ENST00000527046 GAD2Q05329 585 aa11.13□□□□□ -0.63
NEDD8-205ENST00000527046 MLF2Q15773 248 aaPredicted RBP11.13□□□□□ -0.63
NEDD8-205ENST00000527046 FSCBQ5H9T9 825 aa11.13□□□□□ -0.63
NEDD8-205ENST00000527046 KCNT1Q5JUK3 1230 aa11.13□□□□□ -0.63
NEDD8-205ENST00000527046 MPP7Q5T2T1 576 aa11.13□□□□□ -0.63
NEDD8-205ENST00000527046 TMEM215Q68D42 235 aa11.13□□□□□ -0.63
NEDD8-205ENST00000527046 FSTL4Q6MZW2 842 aa11.13□□□□□ -0.63
NEDD8-205ENST00000527046 TRIM67Q6ZTA4 783 aa11.13□□□□□ -0.63
NEDD8-205ENST00000527046 SND1Q7KZF4 910 aaKnown RBP eCLIP11.13□□□□□ -0.63
NEDD8-205ENST00000527046 NLRP14Q86W24 1093 aa11.13□□□□□ -0.63
NEDD8-205ENST00000527046 RALGPS2Q86X27 583 aaPredicted RBP11.13□□□□□ -0.63
NEDD8-205ENST00000527046 CIR1Q86X95 450 aaPredicted RBP11.13□□□□□ -0.63
NEDD8-205ENST00000527046 NAT16Q8N8M0 369 aa11.13□□□□□ -0.63
NEDD8-205ENST00000527046 TSC1Q92574 1164 aa11.13□□□□□ -0.63
NEDD8-205ENST00000527046 RNF34Q969K3 372 aa11.13□□□□□ -0.63
NEDD8-205ENST00000527046 ALG14Q96F25 216 aa11.13□□□□□ -0.63
NEDD8-205ENST00000527046 BBS2Q9BXC9 721 aa11.13□□□□□ -0.63
NEDD8-205ENST00000527046 IRX2Q9BZI1 471 aaPredicted RBP11.13□□□□□ -0.63
NEDD8-205ENST00000527046 NDFIP2Q9NV92 336 aa11.13□□□□□ -0.63
NEDD8-205ENST00000527046 MPP6Q9NZW5 540 aa11.13□□□□□ -0.63
NEDD8-205ENST00000527046 OR12D3Q9UGF7 316 aa11.13□□□□□ -0.63
NEDD8-205ENST00000527046 INTS6Q9UL03 887 aaKnown RBP11.13□□□□□ -0.63
NEDD8-205ENST00000527046 VANGL2Q9ULK5 521 aa11.13□□□□□ -0.63
NEDD8-205ENST00000527046 CA14Q9ULX7 337 aa11.13□□□□□ -0.63
NEDD8-205ENST00000527046 CAPN6Q9Y6Q1 641 aa11.13□□□□□ -0.63
NEDD8-205ENST00000527046 PIAS3Q9Y6X2 628 aa11.13□□□□□ -0.63
NEDD8-205ENST00000527046 CHD5Q8TDI0 1954 aa11.13□□□□□ -0.63
NEDD8-205ENST00000527046 TMEM110-MUSTN1A8MSY1 372 aa11.12□□□□□ -0.63
NEDD8-205ENST00000527046 PRRT4C9JH25 899 aa11.12□□□□□ -0.63
NEDD8-205ENST00000527046 E9PAM4 449 aa11.12□□□□□ -0.63
NEDD8-205ENST00000527046 NEDD8-MDP1E9PL57 170 aa11.12□□□□□ -0.63
NEDD8-205ENST00000527046 K7EQS6 105 aa11.12□□□□□ -0.63
NEDD8-205ENST00000527046 TBL1XO60907 577 aa11.12□□□□□ -0.63
NEDD8-205ENST00000527046 RNF8O76064 485 aa11.12□□□□□ -0.63
NEDD8-205ENST00000527046 MOCS3O95396 460 aa11.12□□□□□ -0.63
NEDD8-205ENST00000527046 CD48P09326 243 aa11.12□□□□□ -0.63
NEDD8-205ENST00000527046 HLA-FP30511 346 aa11.12□□□□□ -0.63
NEDD8-205ENST00000527046 MARCKSL1P49006 195 aa11.12□□□□□ -0.63
NEDD8-205ENST00000527046 PEX5P50542 639 aa11.12□□□□□ -0.63
NEDD8-205ENST00000527046 AIF1P55008 147 aa11.12□□□□□ -0.63
NEDD8-205ENST00000527046 PFKPQ01813 784 aa11.12□□□□□ -0.63
NEDD8-205ENST00000527046 SIGLEC14Q08ET2 396 aa11.12□□□□□ -0.63
NEDD8-205ENST00000527046 DPYSL2Q16555 572 aa11.12□□□□□ -0.63
NEDD8-205ENST00000527046 MPPE1Q53F39 396 aa11.12□□□□□ -0.63
NEDD8-205ENST00000527046 BOLA3Q53S33 107 aa11.12□□□□□ -0.63
NEDD8-205ENST00000527046 TMEM196Q5HYL7 178 aa11.12□□□□□ -0.63
NEDD8-205ENST00000527046 CXorf57Q6NSI4 855 aaKnown RBP11.12□□□□□ -0.63
NEDD8-205ENST00000527046 CPA6Q8N4T0 437 aa11.12□□□□□ -0.63
NEDD8-205ENST00000527046 FIBINQ8TAL6 211 aa11.12□□□□□ -0.63
NEDD8-205ENST00000527046 CSGALNACT1Q8TDX6 532 aa11.12□□□□□ -0.63
NEDD8-205ENST00000527046 TEKT4Q8WW24 435 aa11.12□□□□□ -0.63
NEDD8-205ENST00000527046 RAPGEF5Q92565 580 aa11.12□□□□□ -0.63
NEDD8-205ENST00000527046 BHMTQ93088 406 aa11.12□□□□□ -0.63
NEDD8-205ENST00000527046 NOL6Q9H6R4 1146 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms