RNA–Protein interactions for RNA: ENST00000526645.5

CTSB-212, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-212ENST00000526645 TGFB1I1O43294 461 aa11.26□□□□□ -0.61
CTSB-212ENST00000526645 LATS1O95835 1130 aa11.26□□□□□ -0.61
CTSB-212ENST00000526645 PABPC1P11940 636 aaKnown RBP11.26□□□□□ -0.61
CTSB-212ENST00000526645 GJB2P29033 226 aa11.26□□□□□ -0.61
CTSB-212ENST00000526645 HOXD13P35453 343 aa11.26□□□□□ -0.61
CTSB-212ENST00000526645 NUDT1P36639 197 aa11.26□□□□□ -0.61
CTSB-212ENST00000526645 ST8SIA6P61647 398 aa11.26□□□□□ -0.61
CTSB-212ENST00000526645 DAB2P98082 770 aa11.26□□□□□ -0.61
CTSB-212ENST00000526645 ZNF211Q13398 564 aaPredicted RBP11.26□□□□□ -0.61
CTSB-212ENST00000526645 CST6Q15828 149 aa11.26□□□□□ -0.61
CTSB-212ENST00000526645 SGSM1Q2NKQ1 1148 aa11.26□□□□□ -0.61
CTSB-212ENST00000526645 MBLAC2Q68D91 279 aa11.26□□□□□ -0.61
CTSB-212ENST00000526645 NAPEPLDQ6IQ20 393 aa11.26□□□□□ -0.61
CTSB-212ENST00000526645 INO80CQ6PI98 192 aaPredicted RBP11.26□□□□□ -0.61
CTSB-212ENST00000526645 RSRC2Q7L4I2 434 aaKnown RBP11.26□□□□□ -0.61
CTSB-212ENST00000526645 EPM2AIP1Q7L775 607 aaPredicted RBP11.26□□□□□ -0.61
CTSB-212ENST00000526645 ADIPOR2Q86V24 386 aa11.26□□□□□ -0.61
CTSB-212ENST00000526645 C12orf56Q8IXR9 622 aa11.26□□□□□ -0.61
CTSB-212ENST00000526645 C12orf29Q8N999 325 aa11.26□□□□□ -0.61
CTSB-212ENST00000526645 MFSD2AQ8NA29 543 aa11.26□□□□□ -0.61
CTSB-212ENST00000526645 KDM1BQ8NB78 822 aa11.26□□□□□ -0.61
CTSB-212ENST00000526645 ZNF507Q8TCN5 953 aa11.26□□□□□ -0.61
CTSB-212ENST00000526645 SERAC1Q96JX3 654 aa11.26□□□□□ -0.61
CTSB-212ENST00000526645 FAM117AQ9C073 453 aa11.26□□□□□ -0.61
CTSB-212ENST00000526645 TNMDQ9H2S6 317 aa11.26□□□□□ -0.61
CTSB-212ENST00000526645 OLA1Q9NTK5 396 aaKnown RBP11.26□□□□□ -0.61
CTSB-212ENST00000526645 ABCB8Q9NUT2 735 aa11.26□□□□□ -0.61
CTSB-212ENST00000526645 HMGXB4Q9UGU5 601 aa11.26□□□□□ -0.61
CTSB-212ENST00000526645 IL17BQ9UHF5 180 aa11.26□□□□□ -0.61
CTSB-212ENST00000526645 FBXO2Q9UK22 296 aaPredicted RBP11.26□□□□□ -0.61
CTSB-212ENST00000526645 PCDHB1Q9Y5F3 818 aa11.26□□□□□ -0.61
CTSB-212ENST00000526645 SRPRBQ9Y5M8 271 aaKnown RBP11.26□□□□□ -0.61
CTSB-212ENST00000526645 SLC12A8A0AV02 714 aa11.25□□□□□ -0.61
CTSB-212ENST00000526645 RNASEH2AO75792 299 aaKnown RBP11.25□□□□□ -0.61
CTSB-212ENST00000526645 ASLP04424 464 aa11.25□□□□□ -0.61
CTSB-212ENST00000526645 RPN1P04843 607 aaKnown RBP11.25□□□□□ -0.61
CTSB-212ENST00000526645 MPOP05164 745 aa11.25□□□□□ -0.61
CTSB-212ENST00000526645 SLFN14P0C7P3 912 aa11.25□□□□□ -0.61
CTSB-212ENST00000526645 POLR2EP19388 210 aaKnown RBP11.25□□□□□ -0.61
CTSB-212ENST00000526645 HARS2P49590 506 aaKnown RBP11.25□□□□□ -0.61
CTSB-212ENST00000526645 CLDN10P78369 228 aa11.25□□□□□ -0.61
CTSB-212ENST00000526645 INCA1Q0VD86 236 aa11.25□□□□□ -0.61
CTSB-212ENST00000526645 BNIP3Q12983 259 aa11.25□□□□□ -0.61
CTSB-212ENST00000526645 KCNJ12Q14500 433 aa11.25□□□□□ -0.61
CTSB-212ENST00000526645 ARID5BQ14865 1188 aa11.25□□□□□ -0.61
CTSB-212ENST00000526645 TRIP4Q15650 581 aaPredicted RBP11.25□□□□□ -0.61
CTSB-212ENST00000526645 HNRNPA1L2Q32P51 320 aaKnown RBP11.25□□□□□ -0.61
CTSB-212ENST00000526645 MPP7Q5T2T1 576 aa11.25□□□□□ -0.61
CTSB-212ENST00000526645 CDCP2Q5VXM1 449 aa11.25□□□□□ -0.61
CTSB-212ENST00000526645 XKR5Q6UX68 686 aa11.25□□□□□ -0.61
CTSB-212ENST00000526645 CYFIP2Q96F07 1278 aa11.25□□□□□ -0.61
CTSB-212ENST00000526645 OMDQ99983 421 aa11.25□□□□□ -0.61
CTSB-212ENST00000526645 EBF2Q9HAK2 575 aa11.25□□□□□ -0.61
CTSB-212ENST00000526645 ASCL3Q9NQ33 180 aa11.25□□□□□ -0.61
CTSB-212ENST00000526645 EVA1BQ9NVM1 165 aa11.25□□□□□ -0.61
CTSB-212ENST00000526645 STOML2Q9UJZ1 356 aa11.25□□□□□ -0.61
CTSB-212ENST00000526645 UBR5O95071 2799 aaPredicted RBP11.25□□□□□ -0.61
CTSB-212ENST00000526645 NYNRINQ9P2P1 1898 aaKnown RBP11.24□□□□□ -0.61
CTSB-212ENST00000526645 A0A1W2PP55 124 aa11.24□□□□□ -0.61
CTSB-212ENST00000526645 CLIC2O15247 247 aa11.24□□□□□ -0.61
CTSB-212ENST00000526645 MID1O15344 667 aa11.24□□□□□ -0.61
CTSB-212ENST00000526645 LATO43561 262 aa11.24□□□□□ -0.61
CTSB-212ENST00000526645 LZTS3O60299 673 aaPredicted RBP11.24□□□□□ -0.61
CTSB-212ENST00000526645 USP12O75317 370 aa11.24□□□□□ -0.61
CTSB-212ENST00000526645 ADH1BP00325 375 aa11.24□□□□□ -0.61
CTSB-212ENST00000526645 GP1BAP07359 652 aa11.24□□□□□ -0.61
CTSB-212ENST00000526645 ASPAP45381 313 aa11.24□□□□□ -0.61
CTSB-212ENST00000526645 FAM26FQ5R3K3 315 aa11.24□□□□□ -0.61
CTSB-212ENST00000526645 SND1Q7KZF4 910 aaKnown RBP eCLIP11.24□□□□□ -0.615e-34■■■■□ 21.3
CTSB-212ENST00000526645 PARD3BQ8TEW8 1205 aa11.24□□□□□ -0.61
CTSB-212ENST00000526645 GRAMD1AQ96CP6 724 aa11.24□□□□□ -0.61
CTSB-212ENST00000526645 TMA16Q96EY4 203 aaKnown RBP11.24□□□□□ -0.61
CTSB-212ENST00000526645 VCPIP1Q96JH7 1222 aa11.24□□□□□ -0.61
CTSB-212ENST00000526645 NT5C1AQ9BXI3 368 aa11.24□□□□□ -0.61
CTSB-212ENST00000526645 DUSP16Q9BY84 665 aa11.24□□□□□ -0.61
CTSB-212ENST00000526645 NEUROG2Q9H2A3 272 aa11.24□□□□□ -0.61
CTSB-212ENST00000526645 USP29Q9HBJ7 922 aa11.24□□□□□ -0.61
CTSB-212ENST00000526645 TJP2Q9UDY2 1190 aa11.24□□□□□ -0.61
CTSB-212ENST00000526645 SERGEFQ9UGK8 458 aa11.24□□□□□ -0.61
CTSB-212ENST00000526645 DMTF1Q9Y222 760 aa11.24□□□□□ -0.61
CTSB-212ENST00000526645 HBS1LQ9Y450 684 aaKnown RBP11.24□□□□□ -0.61
CTSB-212ENST00000526645 TARSL2A2RTX5 802 aaKnown RBP11.23□□□□□ -0.61
CTSB-212ENST00000526645 LRRIQ3A6PVS8 624 aaPredicted RBP11.23□□□□□ -0.61
CTSB-212ENST00000526645 TERTO14746 1132 aaKnown RBP11.23□□□□□ -0.61
CTSB-212ENST00000526645 SIGLEC6O43699 453 aa11.23□□□□□ -0.61
CTSB-212ENST00000526645 OPA1O60313 960 aa11.23□□□□□ -0.61
CTSB-212ENST00000526645 EXOC3O60645 756 aa11.23□□□□□ -0.61
CTSB-212ENST00000526645 SIN3BO75182 1162 aa11.23□□□□□ -0.61
CTSB-212ENST00000526645 KIF20AO95235 890 aa11.23□□□□□ -0.61
CTSB-212ENST00000526645 VNN1O95497 513 aa11.23□□□□□ -0.61
CTSB-212ENST00000526645 ASS1P00966 412 aaKnown RBP11.23□□□□□ -0.61
CTSB-212ENST00000526645 C4BPAP04003 597 aaKnown RBP11.23□□□□□ -0.61
CTSB-212ENST00000526645 MLLT3P42568 568 aaPredicted RBP11.23□□□□□ -0.61
CTSB-212ENST00000526645 ADPRHP54922 357 aa11.23□□□□□ -0.61
CTSB-212ENST00000526645 YWHAGP61981 247 aaKnown RBP eCLIP11.23□□□□□ -0.61
CTSB-212ENST00000526645 AMPD3Q01432 767 aa11.23□□□□□ -0.61
CTSB-212ENST00000526645 ZACNQ401N2 412 aa11.23□□□□□ -0.61
CTSB-212ENST00000526645 ADGRF1Q5T601 910 aa11.23□□□□□ -0.61
CTSB-212ENST00000526645 SPATS2Q86XZ4 545 aaKnown RBP11.23□□□□□ -0.61
CTSB-212ENST00000526645 ZC3H3Q8IXZ2 948 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms