RNA–Protein interactions for RNA: ENST00000525670.5

SVIP-202, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-202ENST00000525670 EIF2AQ9BY44 585 aaKnown RBP5.64□□□□□ -1.51
SVIP-202ENST00000525670 NXF3Q9H4D5 531 aaKnown RBP5.64□□□□□ -1.51
SVIP-202ENST00000525670 MTG2Q9H4K7 406 aa5.64□□□□□ -1.51
SVIP-202ENST00000525670 ZSCAN16Q9H4T2 348 aaPredicted RBP5.64□□□□□ -1.51
SVIP-202ENST00000525670 SLC28A3Q9HAS3 691 aa5.64□□□□□ -1.51
SVIP-202ENST00000525670 ANKEF1Q9NU02 776 aa5.64□□□□□ -1.51
SVIP-202ENST00000525670 INTS7Q9NVH2 962 aaKnown RBP5.64□□□□□ -1.51
SVIP-202ENST00000525670 ANKFY1Q9P2R3 1169 aa5.64□□□□□ -1.51
SVIP-202ENST00000525670 MAGEC2Q9UBF1 373 aaPredicted RBP5.64□□□□□ -1.51
SVIP-202ENST00000525670 CACNG4Q9UBN1 327 aa5.64□□□□□ -1.51
SVIP-202ENST00000525670 DNM3Q9UQ16 869 aa5.64□□□□□ -1.51
SVIP-202ENST00000525670 ZKSCAN5Q9Y2L8 839 aa5.64□□□□□ -1.51
SVIP-202ENST00000525670 HES2Q9Y543 173 aa5.64□□□□□ -1.51
SVIP-202ENST00000525670 MRPL42Q9Y6G3 142 aaKnown RBP5.64□□□□□ -1.51
SVIP-202ENST00000525670 PLXNA4Q9HCM2 1894 aa5.64□□□□□ -1.51
SVIP-202ENST00000525670 TTC3P53804 2025 aa5.64□□□□□ -1.51
SVIP-202ENST00000525670 PRRC2BQ5JSZ5 2229 aaKnown RBP5.63□□□□□ -1.51
SVIP-202ENST00000525670 A0A1B0GVL5 298 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 LINC01553A4QN01 128 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 TISP43B9A030 160 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 NT5C1B-RDH14C9J2C7 533 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 ENPP3O14638 875 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 TSPAN1O60635 241 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 FSBPO95073 299 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 LYPLA2O95372 231 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 ASMTLO95671 621 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 BMP15O95972 392 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 PRKCBP05771 671 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 IDEP14735 1019 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 ZSCAN20P17040 1043 aaPredicted RBP5.63□□□□□ -1.51
SVIP-202ENST00000525670 ATF7P17544 494 aaPredicted RBP5.63□□□□□ -1.51
SVIP-202ENST00000525670 AKAP5P24588 427 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 ARL2P36404 184 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 LONP1P36776 959 aaKnown RBP5.63□□□□□ -1.51
SVIP-202ENST00000525670 MATR3P43243 847 aaKnown RBP eCLIP5.63□□□□□ -1.51
SVIP-202ENST00000525670 SLC12A3P55017 1021 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 TAP1Q03518 808 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 MAPK7Q13164 816 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 DMP1Q13316 513 aaPredicted RBP5.63□□□□□ -1.51
SVIP-202ENST00000525670 TFDP1Q14186 410 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 BTG3Q14201 252 aaPredicted RBP5.63□□□□□ -1.51
SVIP-202ENST00000525670 SLC39A14Q15043 492 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 CLLU1OSQ5K130 101 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 RRAGBQ5VZM2 374 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 ARL6IP4Q66PJ3 421 aaKnown RBP5.63□□□□□ -1.51
SVIP-202ENST00000525670 RINT1Q6NUQ1 792 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 SHC4Q6S5L8 630 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 HTR3DQ70Z44 454 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 MRGPRGQ86SM5 289 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 RPAINQ86UA6 219 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 ZNF410Q86VK4 478 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 KIF18BQ86Y91 864 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 ZBTB8OSQ8IWT0 167 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 ELOA2Q8IYF1 753 aaPredicted RBP5.63□□□□□ -1.51
SVIP-202ENST00000525670 DAW1Q8N136 415 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 SYNPOQ8N3V7 929 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 NME8Q8N427 588 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 MCPH1Q8NEM0 835 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 LEO1Q8WVC0 666 aaPredicted RBP5.63□□□□□ -1.51
SVIP-202ENST00000525670 TCP11Q8WWU5 503 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 RAD54LQ92698 747 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 ARL8AQ96BM9 186 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 BICD1Q96G01 975 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 IFT74Q96LB3 600 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 ZNF512Q96ME7 567 aaPredicted RBP5.63□□□□□ -1.51
SVIP-202ENST00000525670 MNTQ99583 582 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 CDX2Q99626 313 aaPredicted RBP5.63□□□□□ -1.51
SVIP-202ENST00000525670 JPH2Q9BR39 696 aaPredicted RBP5.63□□□□□ -1.51
SVIP-202ENST00000525670 FGFBP2Q9BYJ0 223 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 TRIM6Q9C030 488 aaPredicted RBP5.63□□□□□ -1.51
SVIP-202ENST00000525670 BLZF1Q9H2G9 400 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 GOLPH3LQ9H4A5 285 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 IFT122Q9HBG6 1241 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 BLOC1S4Q9NUP1 217 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 GPRC5BQ9NZH0 403 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 PCDHA7Q9UN72 937 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 GDAQ9Y2T3 454 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 PCDHB7Q9Y5E2 793 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 SRPRBQ9Y5M8 271 aaKnown RBP5.63□□□□□ -1.51
SVIP-202ENST00000525670 VCANP13611 3396 aa5.63□□□□□ -1.51
SVIP-202ENST00000525670 RALGAPA2Q2PPJ7 1873 aa5.62□□□□□ -1.51
SVIP-202ENST00000525670 TDRD15B5MCY1 1934 aaKnown RBP5.62□□□□□ -1.51
SVIP-202ENST00000525670 A0A0A6YYK5 440 aaPredicted RBP5.62□□□□□ -1.51
SVIP-202ENST00000525670 MYMKA6NI61 221 aa5.62□□□□□ -1.51
SVIP-202ENST00000525670 GOLGA6L6A8MZA4 724 aa5.62□□□□□ -1.51
SVIP-202ENST00000525670 F8W810 466 aa5.62□□□□□ -1.51
SVIP-202ENST00000525670 POLR2DO15514 142 aaKnown RBP5.62□□□□□ -1.51
SVIP-202ENST00000525670 MTSS1O43312 755 aa5.62□□□□□ -1.51
SVIP-202ENST00000525670 OPHN1O60890 802 aa5.62□□□□□ -1.51
SVIP-202ENST00000525670 ZC3H11AO75152 810 aaKnown RBP eCLIP5.62□□□□□ -1.51
SVIP-202ENST00000525670 IPO13O94829 963 aaKnown RBP5.62□□□□□ -1.51
SVIP-202ENST00000525670 APOL3O95236 402 aa5.62□□□□□ -1.51
SVIP-202ENST00000525670 PARNO95453 639 aaKnown RBP5.62□□□□□ -1.51
SVIP-202ENST00000525670 POMCP01189 267 aa5.62□□□□□ -1.51
SVIP-202ENST00000525670 MYBP10242 640 aa5.62□□□□□ -1.51
SVIP-202ENST00000525670 PFKFB1P16118 471 aa5.62□□□□□ -1.51
SVIP-202ENST00000525670 ARF4P18085 180 aaPredicted RBP5.62□□□□□ -1.51
SVIP-202ENST00000525670 CYP11B2P19099 503 aa5.62□□□□□ -1.51
SVIP-202ENST00000525670 NMT1P30419 496 aaKnown RBP5.62□□□□□ -1.51
SVIP-202ENST00000525670 MLH1P40692 756 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms