RNA–Protein interactions for RNA: ENST00000524534.5

PTPRK-217, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 2,441 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-217ENST00000524534 GOLGA7BQ2TAP0 167 aa11.82□□□□□ -0.52
PTPRK-217ENST00000524534 FSCBQ5H9T9 825 aa11.82□□□□□ -0.52
PTPRK-217ENST00000524534 PPM1JQ5JR12 505 aa11.82□□□□□ -0.52
PTPRK-217ENST00000524534 HEATR6Q6AI08 1181 aaKnown RBP11.82□□□□□ -0.52
PTPRK-217ENST00000524534 CASC4Q6P4E1 433 aa11.82□□□□□ -0.52
PTPRK-217ENST00000524534 EPGNQ6UW88 154 aa11.82□□□□□ -0.52
PTPRK-217ENST00000524534 TMEM110Q86TL2 294 aa11.82□□□□□ -0.52
PTPRK-217ENST00000524534 SATL1Q86VE3 508 aa11.82□□□□□ -0.52
PTPRK-217ENST00000524534 MARVELD2Q8N4S9 558 aa11.82□□□□□ -0.52
PTPRK-217ENST00000524534 C12orf29Q8N999 325 aa11.82□□□□□ -0.52
PTPRK-217ENST00000524534 HIPK4Q8NE63 616 aa11.82□□□□□ -0.52
PTPRK-217ENST00000524534 B4GALNT2Q8NHY0 566 aa11.82□□□□□ -0.52
PTPRK-217ENST00000524534 AFG1LQ8WV93 481 aa11.82□□□□□ -0.52
PTPRK-217ENST00000524534 CLMNQ96JQ2 1002 aa11.82□□□□□ -0.52
PTPRK-217ENST00000524534 KCNK16Q96T55 309 aa11.82□□□□□ -0.52
PTPRK-217ENST00000524534 NT5C1AQ9BXI3 368 aa11.82□□□□□ -0.52
PTPRK-217ENST00000524534 FAM124BQ9H5Z6 455 aaPredicted RBP11.82□□□□□ -0.52
PTPRK-217ENST00000524534 DTLQ9NZJ0 730 aa11.82□□□□□ -0.52
PTPRK-217ENST00000524534 INPP5FQ9Y2H2 1132 aa11.82□□□□□ -0.52
PTPRK-217ENST00000524534 PCDHB12Q9Y5F1 795 aa11.82□□□□□ -0.52
PTPRK-217ENST00000524534 A0A0A0MRY4 1105 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 C15orf38-AP3S2A0A0A6YYH1 394 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 DCXO43602 365 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 LGR5O75473 907 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 TGFB3P10600 412 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 CCDC130P13994 396 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 TFE3P19532 575 aaPredicted RBP11.81□□□□□ -0.52
PTPRK-217ENST00000524534 MX2P20592 715 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 ALDH1A3P47895 512 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 KLF10Q13118 480 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 ITGA9Q13797 1035 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 PABPC1LQ4VXU2 614 aaKnown RBP11.81□□□□□ -0.52
PTPRK-217ENST00000524534 DCAF15Q66K64 600 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 POTEAQ6S8J7 498 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 TMC7Q7Z402 723 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 ARPINQ7Z6K5 226 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 SPATA24Q86W54 205 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 TTC30AQ86WT1 665 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 TRIM50Q86XT4 487 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 HTR3CQ8WXA8 447 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 ISL2Q96A47 359 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 SPATA13Q96N96 652 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 C11orf84Q9BUA3 381 aaPredicted RBP11.81□□□□□ -0.52
PTPRK-217ENST00000524534 MAGEB5Q9BZ81 275 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 CDH19Q9H159 772 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 ASB7Q9H672 318 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 COG4Q9H9E3 785 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 IFT122Q9HBG6 1241 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 EIF2B3Q9NR50 452 aaKnown RBP11.81□□□□□ -0.52
PTPRK-217ENST00000524534 C6orf203Q9P0P8 240 aaPredicted RBP11.81□□□□□ -0.52
PTPRK-217ENST00000524534 PSMD13Q9UNM6 376 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 DTNAQ9Y4J8 743 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 PAPSS1O43252 624 aaPredicted RBP11.81□□□□□ -0.52
PTPRK-217ENST00000524534 ZMPSTE24O75844 475 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 GABBR2O75899 941 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 STAU1O95793 577 aaKnown RBP11.81□□□□□ -0.52
PTPRK-217ENST00000524534 SPATA31D3P0C874 917 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 CPA3P15088 417 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 DESP17661 470 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 MGAT1P26572 445 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 MAGEA12P43365 314 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 PTPN9P43378 593 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 TLR1Q15399 786 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 LY6KQ17RY6 165 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 CCDC153Q494R4 210 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 PPP1R26Q5T8A7 1209 aaPredicted RBP11.81□□□□□ -0.52
PTPRK-217ENST00000524534 METTL21CQ5VZV1 264 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 NCBP2-AS2Q69YL0 99 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 SPATA31D4Q6ZUB0 917 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 SCUBE3Q8IX30 993 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 HACE1Q8IYU2 909 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 PQLC1Q8N2U9 271 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 TTC39CQ8N584 583 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 CENPIQ92674 756 aaPredicted RBP11.81□□□□□ -0.52
PTPRK-217ENST00000524534 CSPG4P5Q96PW8 444 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 WRNIP1Q96S55 665 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 KCTD15Q96SI1 283 aaPredicted RBP11.81□□□□□ -0.52
PTPRK-217ENST00000524534 RNPEPQ9H4A4 650 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 DHX35Q9H5Z1 703 aaKnown RBP11.81□□□□□ -0.52
PTPRK-217ENST00000524534 OCEL1Q9H607 264 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 NR2E3Q9Y5X4 410 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 CDY2AQ9Y6F7 541 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 CDY1Q9Y6F8 540 aa11.81□□□□□ -0.52
PTPRK-217ENST00000524534 SOWAHBA6NEL2 793 aa11.8□□□□□ -0.52
PTPRK-217ENST00000524534 CAPN8A6NHC0 703 aa11.8□□□□□ -0.52
PTPRK-217ENST00000524534 HACD1B0YJ81 288 aa11.8□□□□□ -0.52
PTPRK-217ENST00000524534 TXNDC9O14530 226 aa11.8□□□□□ -0.52
PTPRK-217ENST00000524534 FBXO21O94952 628 aa11.8□□□□□ -0.52
PTPRK-217ENST00000524534 OR6B1O95007 311 aa11.8□□□□□ -0.52
PTPRK-217ENST00000524534 SETSIPP0DME0 302 aa11.8□□□□□ -0.52
PTPRK-217ENST00000524534 MCF2P10911 925 aa11.8□□□□□ -0.52
PTPRK-217ENST00000524534 TYK2P29597 1187 aa11.8□□□□□ -0.52
PTPRK-217ENST00000524534 SESN2P58004 480 aaPredicted RBP11.8□□□□□ -0.52
PTPRK-217ENST00000524534 USP4Q13107 963 aa11.8□□□□□ -0.52
PTPRK-217ENST00000524534 SLC10A6Q3KNW5 377 aa11.8□□□□□ -0.52
PTPRK-217ENST00000524534 GRAMD1BQ3KR37 738 aa11.8□□□□□ -0.52
PTPRK-217ENST00000524534 SLC9B1Q4ZJI4 515 aa11.8□□□□□ -0.52
PTPRK-217ENST00000524534 PLPPR4Q7Z2D5 763 aa11.8□□□□□ -0.52
PTPRK-217ENST00000524534 SLC35F5Q8WV83 523 aa11.8□□□□□ -0.52
PTPRK-217ENST00000524534 TRAPPC12Q8WVT3 735 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms