RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 DCUN1D2Q6PH85 259 aa12.99□□□□□ -0.33
VEGFA-225ENST00000523950 MFN1Q8IWA4 741 aa12.99□□□□□ -0.33
VEGFA-225ENST00000523950 LGI2Q8N0V4 545 aa12.99□□□□□ -0.33
VEGFA-225ENST00000523950 AHI1Q8N157 1196 aa12.99□□□□□ -0.33
VEGFA-225ENST00000523950 ZNF513Q8N8E2 541 aaPredicted RBP12.99□□□□□ -0.33
VEGFA-225ENST00000523950 JOSD2Q8TAC2 188 aa12.99□□□□□ -0.33
VEGFA-225ENST00000523950 FIBINQ8TAL6 211 aa12.99□□□□□ -0.33
VEGFA-225ENST00000523950 CENPIQ92674 756 aaPredicted RBP12.99□□□□□ -0.33
VEGFA-225ENST00000523950 ATOH1Q92858 354 aaPredicted RBP12.99□□□□□ -0.33
VEGFA-225ENST00000523950 P2RY11Q96G91 374 aa12.99□□□□□ -0.33
VEGFA-225ENST00000523950 MRFAP1L1Q96HT8 127 aa12.99□□□□□ -0.33
VEGFA-225ENST00000523950 C1orf74Q96LT6 269 aa12.99□□□□□ -0.33
VEGFA-225ENST00000523950 HAPLN3Q96S86 360 aa12.99□□□□□ -0.33
VEGFA-225ENST00000523950 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.99□□□□□ -0.33
VEGFA-225ENST00000523950 ADAM33Q9BZ11 813 aa12.99□□□□□ -0.33
VEGFA-225ENST00000523950 MRPL47Q9HD33 250 aaKnown RBP12.99□□□□□ -0.33
VEGFA-225ENST00000523950 ABHD10Q9NUJ1 306 aa12.99□□□□□ -0.33
VEGFA-225ENST00000523950 CALCOCO1Q9P1Z2 691 aa12.99□□□□□ -0.33
VEGFA-225ENST00000523950 ADAMTS1Q9UHI8 967 aa12.99□□□□□ -0.33
VEGFA-225ENST00000523950 XPO7Q9UIA9 1087 aaKnown RBP12.99□□□□□ -0.33
VEGFA-225ENST00000523950 SLC8A2Q9UPR5 921 aa12.99□□□□□ -0.33
VEGFA-225ENST00000523950 PCDHGA2Q9Y5H1 932 aa12.99□□□□□ -0.33
VEGFA-225ENST00000523950 CACNA1IQ9P0X4 2223 aa12.98□□□□□ -0.33
VEGFA-225ENST00000523950 A0A1B0GVM2 712 aa12.98□□□□□ -0.33
VEGFA-225ENST00000523950 FAM170AA1A519 330 aa12.98□□□□□ -0.33
VEGFA-225ENST00000523950 TCAF2A6NFQ2 919 aa12.98□□□□□ -0.33
VEGFA-225ENST00000523950 TMCO5BA8MYB1 307 aa12.98□□□□□ -0.33
VEGFA-225ENST00000523950 PRRT4C9JH25 899 aa12.98□□□□□ -0.33
VEGFA-225ENST00000523950 K7ESF4 209 aa12.98□□□□□ -0.33
VEGFA-225ENST00000523950 LUC7L3O95232 432 aaKnown RBP12.98□□□□□ -0.33
VEGFA-225ENST00000523950 HNRNPLP14866 589 aaKnown RBP eCLIP12.98□□□□□ -0.33
VEGFA-225ENST00000523950 TFE3P19532 575 aaPredicted RBP12.98□□□□□ -0.33
VEGFA-225ENST00000523950 TIE1P35590 1138 aa12.98□□□□□ -0.33
VEGFA-225ENST00000523950 SGSHP51688 502 aa12.98□□□□□ -0.33
VEGFA-225ENST00000523950 SEC13P55735 322 aa12.98□□□□□ -0.33
VEGFA-225ENST00000523950 ATP11AP98196 1134 aa12.98□□□□□ -0.33
VEGFA-225ENST00000523950 NHLH1Q02575 133 aa12.98□□□□□ -0.33
VEGFA-225ENST00000523950 TBX2Q13207 712 aaPredicted RBP12.98□□□□□ -0.33
VEGFA-225ENST00000523950 MAPK8IP2Q13387 824 aaPredicted RBP12.98□□□□□ -0.33
VEGFA-225ENST00000523950 MAMLD1Q13495 774 aa12.98□□□□□ -0.33
VEGFA-225ENST00000523950 DMC1Q14565 340 aa12.98□□□□□ -0.33
VEGFA-225ENST00000523950 GEN1Q17RS7 908 aa12.98□□□□□ -0.33
VEGFA-225ENST00000523950 C2orf27AQ580R0 203 aa12.98□□□□□ -0.33
VEGFA-225ENST00000523950 SDE2Q6IQ49 451 aa12.98□□□□□ -0.33
VEGFA-225ENST00000523950 PKN3Q6P5Z2 889 aa12.98□□□□□ -0.33
VEGFA-225ENST00000523950 WDR59Q6PJI9 974 aa12.98□□□□□ -0.33
VEGFA-225ENST00000523950 KIAA0907Q7Z7F0 614 aaPredicted RBP12.98□□□□□ -0.33
VEGFA-225ENST00000523950 PHLDB2Q86SQ0 1253 aa12.98□□□□□ -0.33
VEGFA-225ENST00000523950 GAS2L3Q86XJ1 694 aa12.98□□□□□ -0.33
VEGFA-225ENST00000523950 FNIP1Q8TF40 1166 aa12.98□□□□□ -0.33
VEGFA-225ENST00000523950 NTAN1Q96AB6 310 aa12.98□□□□□ -0.33
VEGFA-225ENST00000523950 MCEEQ96PE7 176 aa12.98□□□□□ -0.33
VEGFA-225ENST00000523950 NCAPGQ9BPX3 1015 aa12.98□□□□□ -0.33
VEGFA-225ENST00000523950 CNPY3Q9BT09 278 aa12.98□□□□□ -0.33
VEGFA-225ENST00000523950 SEMA4AQ9H3S1 761 aa12.98□□□□□ -0.33
VEGFA-225ENST00000523950 ZSCAN32Q9NX65 697 aa12.98□□□□□ -0.33
VEGFA-225ENST00000523950 ARHGAP20Q9P2F6 1191 aa12.98□□□□□ -0.33
VEGFA-225ENST00000523950 CNOT8Q9UFF9 292 aaKnown RBP12.98□□□□□ -0.33
VEGFA-225ENST00000523950 RAPGEFL1Q9UHV5 662 aa12.98□□□□□ -0.33
VEGFA-225ENST00000523950 GGA2Q9UJY4 613 aa12.98□□□□□ -0.33
VEGFA-225ENST00000523950 HS3ST4Q9Y661 456 aa12.98□□□□□ -0.33
VEGFA-225ENST00000523950 ATG2BQ96BY7 2078 aa12.98□□□□□ -0.33
VEGFA-225ENST00000523950 A0A087X0T9 212 aa12.97□□□□□ -0.33
VEGFA-225ENST00000523950 AKR1B15C9JRZ8 316 aaPredicted RBP12.97□□□□□ -0.33
VEGFA-225ENST00000523950 TRIM24O15164 1050 aa12.97□□□□□ -0.33
VEGFA-225ENST00000523950 AP5Z1O43299 807 aa12.97□□□□□ -0.33
VEGFA-225ENST00000523950 ADCY5O95622 1261 aa12.97□□□□□ -0.33
VEGFA-225ENST00000523950 FAM228BP0C875 321 aa12.97□□□□□ -0.33
VEGFA-225ENST00000523950 PABPC1P11940 636 aaKnown RBP12.97□□□□□ -0.33
VEGFA-225ENST00000523950 HLA-FP30511 346 aa12.97□□□□□ -0.33
VEGFA-225ENST00000523950 NTSR1P30989 418 aa12.97□□□□□ -0.33
VEGFA-225ENST00000523950 NBL1P41271 181 aa12.97□□□□□ -0.33
VEGFA-225ENST00000523950 ZNF75DP51815 510 aa12.97□□□□□ -0.33
VEGFA-225ENST00000523950 DGKEP52429 567 aa12.97□□□□□ -0.33
VEGFA-225ENST00000523950 AIF1P55008 147 aa12.97□□□□□ -0.33
VEGFA-225ENST00000523950 HDAC4P56524 1084 aa12.97□□□□□ -0.33
VEGFA-225ENST00000523950 RPS24P62847 133 aaKnown RBP12.97□□□□□ -0.33
VEGFA-225ENST00000523950 NRG1Q02297 640 aaPredicted RBP12.97□□□□□ -0.33
VEGFA-225ENST00000523950 SLC12A1Q13621 1099 aa12.97□□□□□ -0.33
VEGFA-225ENST00000523950 CDH18Q13634 790 aa12.97□□□□□ -0.33
VEGFA-225ENST00000523950 AUHQ13825 339 aaKnown RBP12.97□□□□□ -0.33
VEGFA-225ENST00000523950 SLC18A3Q16572 532 aa12.97□□□□□ -0.33
VEGFA-225ENST00000523950 CDO1Q16878 200 aa12.97□□□□□ -0.33
VEGFA-225ENST00000523950 C15orf59Q2T9L4 293 aaPredicted RBP12.97□□□□□ -0.33
VEGFA-225ENST00000523950 FBXL22Q6P050 247 aa12.97□□□□□ -0.33
VEGFA-225ENST00000523950 LRRC31Q6UY01 552 aa12.97□□□□□ -0.33
VEGFA-225ENST00000523950 CHST9Q7L1S5 443 aa12.97□□□□□ -0.33
VEGFA-225ENST00000523950 TMC6Q7Z403 805 aa12.97□□□□□ -0.33
VEGFA-225ENST00000523950 FAM131BQ86XD5 332 aa12.97□□□□□ -0.33
VEGFA-225ENST00000523950 SFTPA1Q8IWL2 248 aa12.97□□□□□ -0.33
VEGFA-225ENST00000523950 ALLCQ8N6M5 410 aa12.97□□□□□ -0.33
VEGFA-225ENST00000523950 IL17RCQ8NAC3 791 aa12.97□□□□□ -0.33
VEGFA-225ENST00000523950 TXNDC5Q8NBS9 432 aaKnown RBP12.97□□□□□ -0.33
VEGFA-225ENST00000523950 ZBTB44Q8NCP5 570 aa12.97□□□□□ -0.33
VEGFA-225ENST00000523950 FAM172AQ8WUF8 416 aa12.97□□□□□ -0.33
VEGFA-225ENST00000523950 ZNF653Q96CK0 615 aa12.97□□□□□ -0.33
VEGFA-225ENST00000523950 RPRD1AQ96P16 312 aaPredicted RBP12.97□□□□□ -0.33
VEGFA-225ENST00000523950 PPP1R9BQ96SB3 815 aa12.97□□□□□ -0.33
VEGFA-225ENST00000523950 DEF6Q9H4E7 631 aa12.97□□□□□ -0.33
VEGFA-225ENST00000523950 RETREG1Q9H6L5 497 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms