RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 FAM228AQ86W67 206 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 LZTR1Q8N653 840 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 EXD3Q8N9H8 876 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 NUP43Q8NFH3 380 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 IL31RAQ8NI17 732 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 ABHD4Q8TB40 342 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 PLEKHO2Q8TD55 490 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 PHKBQ93100 1093 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 LRGUKQ96M69 825 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 NUDT16L1Q9BRJ7 211 aaKnown RBP5.54□□□□□ -1.52
PABPC1-223ENST00000523636 MRPL9Q9BYD2 267 aaKnown RBP5.54□□□□□ -1.52
PABPC1-223ENST00000523636 CELF4Q9BZC1 486 aaKnown RBP5.54□□□□□ -1.52
PABPC1-223ENST00000523636 FAM49AQ9H0Q0 323 aaPredicted RBP5.54□□□□□ -1.52
PABPC1-223ENST00000523636 CDIP1Q9H305 208 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 NRDE2Q9H7Z3 1164 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 C1orf112Q9NSG2 853 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 TCP11L1Q9NUJ3 509 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 NKIRAS2Q9NYR9 191 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 CEP72Q9P209 647 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 PDP2Q9P2J9 529 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 PPARGC1AQ9UBK2 798 aaKnown RBP5.54□□□□□ -1.52
PABPC1-223ENST00000523636 GULP1Q9UBP9 304 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 DNAJB4Q9UDY4 337 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 PLEKHB1Q9UF11 243 aaPredicted RBP5.54□□□□□ -1.52
PABPC1-223ENST00000523636 GPR160Q9UJ42 338 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 TUBE1Q9UJT0 475 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 INVSQ9Y283 1065 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 RRP15Q9Y3B9 282 aaKnown RBP5.54□□□□□ -1.52
PABPC1-223ENST00000523636 OAS3Q9Y6K5 1087 aaKnown RBP5.54□□□□□ -1.52
PABPC1-223ENST00000523636 COL6A5A8TX70 2615 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 MYH6P13533 1939 aa5.54□□□□□ -1.52
PABPC1-223ENST00000523636 JMJD1CQ15652 2540 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 PKD1L1Q8TDX9 2849 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 SALL3Q9BXA9 1300 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 TMEM110-MUSTN1A8MSY1 372 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 FAM47E-STBD1D6RA91 191 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 PLK4O00444 970 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 BIN1O00499 593 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 GSTA4O15217 222 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 SUV39H1O43463 412 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 TGM5O43548 720 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 PPP1R11O60927 126 aaPredicted RBP5.53□□□□□ -1.52
PABPC1-223ENST00000523636 RHOBTB1O94844 696 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 TTLL1O95922 423 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 SOD2P04179 222 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 HPDP32754 393 aaPredicted RBP5.53□□□□□ -1.52
PABPC1-223ENST00000523636 SLC1A4P43007 532 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 SLC11A1P49279 550 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 HSD17B7P56937 341 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 NFATC3Q12968 1075 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 IKQ13123 557 aaPredicted RBP5.53□□□□□ -1.52
PABPC1-223ENST00000523636 PDCD2Q16342 344 aaPredicted RBP5.53□□□□□ -1.52
PABPC1-223ENST00000523636 SLC5A9Q2M3M2 681 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 ISM2Q6H9L7 571 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 BTNL9Q6UXG8 535 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 OTUD6AQ7L8S5 288 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 CATSPER4Q7RTX7 472 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 GLRX5Q86SX6 157 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 MYLK4Q86YV6 388 aaPredicted RBP5.53□□□□□ -1.52
PABPC1-223ENST00000523636 RNF168Q8IYW5 571 aaPredicted RBP5.53□□□□□ -1.52
PABPC1-223ENST00000523636 AHI1Q8N157 1196 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 PPM1KQ8N3J5 372 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 OR8H1Q8NGG4 311 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 PCDH19Q8TAB3 1148 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 ING5Q8WYH8 240 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 RSRC1Q96IZ7 334 aaKnown RBP5.53□□□□□ -1.52
PABPC1-223ENST00000523636 KIRREL1Q96J84 757 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 SGCZQ96LD1 299 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 SLC13A1Q9BZW2 595 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 TRIM6Q9C030 488 aaPredicted RBP5.53□□□□□ -1.52
PABPC1-223ENST00000523636 PDCL3Q9H2J4 239 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 YY1AP1Q9H869 796 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 RSAD1Q9HA92 442 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 CPNE5Q9HCH3 593 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 TCF7L1Q9HCS4 588 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 TRPV5Q9NQA5 729 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 HELLSQ9NRZ9 838 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 TOPORSQ9NS56 1045 aaPredicted RBP5.53□□□□□ -1.52
PABPC1-223ENST00000523636 DIAPH3Q9NSV4 1193 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 HCFC1R1Q9NWW0 138 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 ZDHHC7Q9NXF8 308 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 MARCH2Q9P0N8 246 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 GIMAP2Q9UG22 337 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 DBNLQ9UJU6 430 aaKnown RBP5.53□□□□□ -1.52
PABPC1-223ENST00000523636 ST3GAL5Q9UNP4 418 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 PCDHA9Q9Y5H5 950 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 PCDHA8Q9Y5H6 950 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 PLIN4Q96Q06 1357 aa5.53□□□□□ -1.52
PABPC1-223ENST00000523636 ZNF532Q9HCE3 1301 aa5.52□□□□□ -1.53
PABPC1-223ENST00000523636 DENND3A2RUS2 1198 aa5.52□□□□□ -1.53
PABPC1-223ENST00000523636 C22orf46C9J442 243 aa5.52□□□□□ -1.53
PABPC1-223ENST00000523636 FOXN3O00409 490 aaPredicted RBP5.52□□□□□ -1.53
PABPC1-223ENST00000523636 SRGAP3O43295 1099 aa5.52□□□□□ -1.53
PABPC1-223ENST00000523636 OPA1O60313 960 aa5.52□□□□□ -1.53
PABPC1-223ENST00000523636 ZC3H11AO75152 810 aaKnown RBP eCLIP5.52□□□□□ -1.53
PABPC1-223ENST00000523636 GLUD1P00367 558 aa5.52□□□□□ -1.53
PABPC1-223ENST00000523636 MSL3P1P0C860 447 aa5.52□□□□□ -1.53
PABPC1-223ENST00000523636 ERVFRD-1P60508 538 aa5.52□□□□□ -1.53
PABPC1-223ENST00000523636 LMAN2Q12907 356 aa5.52□□□□□ -1.53
PABPC1-223ENST00000523636 PPFIA1Q13136 1202 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms