RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 HMBOX1Q6NT76 420 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 C16orf46Q6P387 395 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 FRMD7Q6ZUT3 714 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 CHSY3Q70JA7 882 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 SLC26A11Q86WA9 606 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 MMAAQ8IVH4 418 aaKnown RBP8.6□□□□□ -1.03
CSMD1-213ENST00000523488 PIWIL2Q8TC59 973 aaKnown RBP8.6□□□□□ -1.03
CSMD1-213ENST00000523488 FNIP1Q8TF40 1166 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 COA7Q96BR5 231 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 TRAF4Q9BUZ4 470 aaPredicted RBP8.6□□□□□ -1.03
CSMD1-213ENST00000523488 TMEM117Q9H0C3 514 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 SP140LQ9H930 580 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 CD320Q9NPF0 282 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 HOXC10Q9NYD6 342 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.6□□□□□ -1.03
CSMD1-213ENST00000523488 DNPEPQ9ULA0 475 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 A0A1B0GTW7 788 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 SOWAHBA6NEL2 793 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 FOXD2O60548 495 aaPredicted RBP8.6□□□□□ -1.03
CSMD1-213ENST00000523488 GMNNO75496 209 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 SORBS2O94875 1100 aaKnown RBP8.6□□□□□ -1.03
CSMD1-213ENST00000523488 TMEM63AO94886 807 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 MCF2P10911 925 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 TKTP29401 623 aaKnown RBP8.6□□□□□ -1.03
CSMD1-213ENST00000523488 BMPR1AP36894 532 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 SLC25A11Q02978 314 aaKnown RBP8.6□□□□□ -1.03
CSMD1-213ENST00000523488 SELENBP1Q13228 472 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 MTM1Q13496 603 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 USP17L2Q6R6M4 530 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 BBS12Q6ZW61 710 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 PRSS48Q7RTY5 328 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 KRT27Q7Z3Y8 459 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 IGDCC3Q8IVU1 814 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 TTC30BQ8N4P2 665 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 MYCT1Q8N699 235 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 HCAR2Q8TDS4 363 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 ASB9Q96DX5 294 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 ZNF512Q96ME7 567 aaPredicted RBP8.6□□□□□ -1.03
CSMD1-213ENST00000523488 KLHL32Q96NJ5 620 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 ZNF347Q96SE7 839 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 APOL6Q9BWW8 343 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 OSBPL10Q9BXB5 764 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 CD209Q9NNX6 404 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 MTMR10Q9NXD2 777 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 EBF1Q9UH73 591 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 CARD8Q9Y2G2 431 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 THSD7AQ9UPZ6 1657 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 GBF1Q92538 1859 aa8.6□□□□□ -1.03
CSMD1-213ENST00000523488 TCRBV9S1A1TA0A576 114 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 TMEM191CA6NGB0 347 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 SFI1A8K8P3 1242 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 C6orf229H3BNL8 230 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 GNPATO15228 680 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 MGEA5O60502 916 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 IL18RAPO95256 599 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 TMEM191BP0C7N4 346 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 POLR2BP30876 1174 aaKnown RBP8.59□□□□□ -1.03
CSMD1-213ENST00000523488 RHBDL3P58872 404 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 NFX1Q12986 1120 aaKnown RBP8.59□□□□□ -1.03
CSMD1-213ENST00000523488 NFIXQ14938 502 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 PCLAFQ15004 111 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 CHI3L2Q15782 390 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 RGS21Q2M5E4 152 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 GJC2Q5T442 439 aaPredicted RBP8.59□□□□□ -1.03
CSMD1-213ENST00000523488 POTEGQ6S5H5 508 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 DENND5BQ6ZUT9 1274 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 SLC47A2Q86VL8 602 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 PELI3Q8N2H9 469 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 ELMOD1Q8N336 334 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 ZUFSPQ96AP4 578 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 GPR101Q96P66 508 aaPredicted RBP8.59□□□□□ -1.03
CSMD1-213ENST00000523488 PSTPIP2Q9H939 334 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 PAK1IP1Q9NWT1 392 aaPredicted RBP8.59□□□□□ -1.03
CSMD1-213ENST00000523488 DDX56Q9NY93 547 aaKnown RBP8.59□□□□□ -1.03
CSMD1-213ENST00000523488 MTMR4Q9NYA4 1195 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.59□□□□□ -1.03
CSMD1-213ENST00000523488 MINPP1Q9UNW1 487 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 AUP1Q9Y679 476 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 ANKRD34BA5PLL1 514 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 SGK1O00141 431 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 CLOCKO15516 846 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 TOM1L1O75674 476 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 HOXD11P31277 338 aaPredicted RBP8.59□□□□□ -1.03
CSMD1-213ENST00000523488 DPP6P42658 865 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 GYG1P46976 350 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 LEPRP48357 1165 aaKnown RBP8.59□□□□□ -1.03
CSMD1-213ENST00000523488 BMXP51813 675 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 NOMO3P69849 1222 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 PTK7Q13308 1070 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 ITGADQ13349 1161 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 KCNJ8Q15842 424 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 ANKRD22Q5VYY1 191 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 OGFOD2Q6N063 350 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 STXBP4Q6ZWJ1 553 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 ILDR2Q71H61 639 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 ZNF534Q76KX8 674 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 HPS6Q86YV9 775 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 KLHDC8BQ8IXV7 354 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 CADM3Q8N126 398 aa8.59□□□□□ -1.03
CSMD1-213ENST00000523488 SIX5Q8N196 739 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms