RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 XPO1O14980 1071 aaKnown RBP13.4□□□□□ -0.26
PCDHGB1-201ENST00000523390 LRCH4O75427 683 aa13.4□□□□□ -0.26
PCDHGB1-201ENST00000523390 VNN1O95497 513 aa13.4□□□□□ -0.26
PCDHGB1-201ENST00000523390 PRKCZQ05513 592 aa13.4□□□□□ -0.26
PCDHGB1-201ENST00000523390 PMF1Q6P1K2 205 aa13.4□□□□□ -0.26
PCDHGB1-201ENST00000523390 XYLT1Q86Y38 959 aa13.4□□□□□ -0.26
PCDHGB1-201ENST00000523390 CDYLQ9Y232 598 aa13.4□□□□□ -0.26
PCDHGB1-201ENST00000523390 PTCH2Q9Y6C5 1203 aa13.4□□□□□ -0.26
PCDHGB1-201ENST00000523390 DRG2P55039 364 aaKnown RBP13.4□□□□□ -0.26
PCDHGB1-201ENST00000523390 DCLRE1AQ6PJP8 1040 aa13.4□□□□□ -0.26
PCDHGB1-201ENST00000523390 LAYNQ6UX15 382 aa13.4□□□□□ -0.26
PCDHGB1-201ENST00000523390 C16orf59Q7L2K0 433 aa13.4□□□□□ -0.26
PCDHGB1-201ENST00000523390 ITIH5Q86UX2 942 aa13.4□□□□□ -0.26
PCDHGB1-201ENST00000523390 KCNMB4Q86W47 210 aa13.4□□□□□ -0.26
PCDHGB1-201ENST00000523390 AGGF1Q8N302 714 aaeCLIP13.4□□□□□ -0.26
PCDHGB1-201ENST00000523390 MSL3Q8N5Y2 521 aaKnown RBP13.4□□□□□ -0.26
PCDHGB1-201ENST00000523390 OR52K1Q8NGK4 314 aa13.4□□□□□ -0.26
PCDHGB1-201ENST00000523390 PCDH18Q9HCL0 1135 aa13.4□□□□□ -0.26
PCDHGB1-201ENST00000523390 GPAMQ9HCL2 828 aa13.4□□□□□ -0.26
PCDHGB1-201ENST00000523390 DNAJC16Q9Y2G8 782 aa13.4□□□□□ -0.26
PCDHGB1-201ENST00000523390 PRR23AA6NEV1 266 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 NCF1BA6NI72 391 aaPredicted RBP13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 NCF1CA8MVU1 366 aaPredicted RBP13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 RALBP11234 206 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 NCF1P14598 390 aaPredicted RBP13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 CPA3P15088 417 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 GRK4P32298 578 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 AP2B1P63010 937 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 ZNF470Q6ECI4 717 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 RPAINQ86UA6 219 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 CPNE8Q86YQ8 564 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 UROC1Q96N76 676 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 TRIM15Q9C019 465 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 CXorf56Q9H5V9 222 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 NR2E1Q9Y466 385 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 ORC6Q9Y5N6 252 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 SEPT4O43236 478 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 E2F6O75461 281 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 KLHL2O95198 593 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 AMHP03971 560 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 APOA4P06727 396 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 FECHP22830 423 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 GTF2H3Q13889 308 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 N4BP2L1Q5TBK1 243 aaPredicted RBP13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 ZNF670Q9BS34 389 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 FAM167BQ9BTA0 163 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 FTHL17Q9BXU8 183 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 BRD8Q9H0E9 1235 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 CNGB3Q9NQW8 809 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 UTP6Q9NYH9 597 aaKnown RBP13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 TNFRSF8P28908 595 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 TBCCQ15814 346 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 RETSATQ6NUM9 610 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 DPF3Q92784 378 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 SFMBT1Q9UHJ3 866 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 SCOCQ9UIL1 159 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 MYH3P11055 1940 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 RNF103-CHMP3A0A140T963 221 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 GLP2RO95838 553 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 ITGAVP06756 1048 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 ADRA1DP25100 572 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 GCKP35557 465 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 ATP5C1P36542 298 aaKnown RBP13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 SLC39A4Q6P5W5 647 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 HERC6Q8IVU3 1022 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 PGBD3Q8N328 593 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 RASGEF1CQ8N431 466 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 RFWD2Q8NHY2 731 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 RNF217Q8TC41 542 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 MIPOL1Q8TD10 442 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 PLEKHO2Q8TD55 490 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 USP13Q92995 863 aaPredicted RBP13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 SRPK1Q96SB4 655 aaKnown RBP13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 DPEP3Q9H4B8 488 aa13.39□□□□□ -0.27
PCDHGB1-201ENST00000523390 VPS26AO75436 327 aa13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 CRTAMO95727 393 aa13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 ERVK-10P10266 1014 aa13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 PGAM1P18669 254 aa13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 TCN1P20061 433 aaPredicted RBP13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 NOVP48745 357 aa13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 CLCNKBP51801 687 aa13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 AQP5P55064 265 aa13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 ITGA9Q13797 1035 aa13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 AUHQ13825 339 aaKnown RBP13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 PARP6Q2NL67 630 aa13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 ASTE1Q2TB18 679 aaPredicted RBP13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 ATAD1Q8NBU5 361 aa13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 NPLOC4Q8TAT6 608 aa13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 FOPNLQ96NB1 174 aa13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 SLC24A3Q9HC58 644 aa13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 VPS9D1Q9Y2B5 631 aa13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 MYH6P13533 1939 aa13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 HEATR9A2RTY3 570 aa13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 HNRNPCL1O60812 293 aaKnown RBP13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 MYO1DO94832 1006 aa13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 PDHA1P08559 390 aa13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 NFKB1P19838 968 aa13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 ATP4AP20648 1035 aa13.38□□□□□ -0.27
PCDHGB1-201ENST00000523390 KCNA3P22001 575 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms