RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 CLEC4CQ8WTT0 213 aa5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 LENG8Q96PV6 779 aaPredicted RBP5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 HTATIP2Q9BUP3 242 aa5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 ELOVL1Q9BW60 279 aa5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 SLC22A11Q9NSA0 550 aa5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 SEMA5BQ9P283 1151 aa5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 FZD4Q9ULV1 537 aa5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 CNPY2Q9Y2B0 182 aa5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 SLC45A1Q9Y2W3 748 aa5.86□□□□□ -1.47
HMGB1P46-201ENST00000520062 SPATA31A1Q5TZJ5 1347 aa5.85□□□□□ -1.47
HMGB1P46-201ENST00000520062 GAGE10A6NGK3 116 aa5.85□□□□□ -1.47
HMGB1P46-201ENST00000520062 SH2D7A6NKC9 451 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P46-201ENST00000520062 ZNF213O14771 459 aa5.85□□□□□ -1.47
HMGB1P46-201ENST00000520062 TSPAN4O14817 238 aa5.85□□□□□ -1.47
HMGB1P46-201ENST00000520062 SUV39H1O43463 412 aa5.85□□□□□ -1.47
HMGB1P46-201ENST00000520062 C1SP09871 688 aa5.85□□□□□ -1.47
HMGB1P46-201ENST00000520062 NDUFB7P17568 137 aa5.85□□□□□ -1.47
HMGB1P46-201ENST00000520062 CXCR5P32302 372 aa5.85□□□□□ -1.47
HMGB1P46-201ENST00000520062 CYP2C18P33260 490 aa5.85□□□□□ -1.47
HMGB1P46-201ENST00000520062 PAFAH1B1P43034 410 aa5.85□□□□□ -1.47
HMGB1P46-201ENST00000520062 CDK18Q07002 472 aa5.85□□□□□ -1.47
HMGB1P46-201ENST00000520062 KRT32Q14532 448 aa5.85□□□□□ -1.47
HMGB1P46-201ENST00000520062 CDSNQ15517 529 aa5.85□□□□□ -1.47
HMGB1P46-201ENST00000520062 NFIL3Q16649 462 aa5.85□□□□□ -1.47
HMGB1P46-201ENST00000520062 RUNDC3AQ59EK9 446 aa5.85□□□□□ -1.47
HMGB1P46-201ENST00000520062 AARS2Q5JTZ9 985 aaKnown RBP5.85□□□□□ -1.47
HMGB1P46-201ENST00000520062 ITPRIPL1Q6GPH6 555 aa5.85□□□□□ -1.47
HMGB1P46-201ENST00000520062 SLC39A5Q6ZMH5 540 aa5.85□□□□□ -1.47
HMGB1P46-201ENST00000520062 R3HCC1LQ7Z5L2 792 aaKnown RBP5.85□□□□□ -1.47
HMGB1P46-201ENST00000520062 BEND2Q8NDZ0 799 aa5.85□□□□□ -1.47
HMGB1P46-201ENST00000520062 TFAP2BQ92481 460 aa5.85□□□□□ -1.47
HMGB1P46-201ENST00000520062 COQ10AQ96MF6 247 aa5.85□□□□□ -1.47
HMGB1P46-201ENST00000520062 NEUROD6Q96NK8 337 aa5.85□□□□□ -1.47
HMGB1P46-201ENST00000520062 PLEKHG4BQ96PX9 1271 aa5.85□□□□□ -1.47
HMGB1P46-201ENST00000520062 CD180Q99467 661 aa5.85□□□□□ -1.47
HMGB1P46-201ENST00000520062 WDR11Q9BZH6 1224 aa5.85□□□□□ -1.47
HMGB1P46-201ENST00000520062 CLPBQ9H078 707 aa5.85□□□□□ -1.47
HMGB1P46-201ENST00000520062 INTS2Q9H0H0 1204 aaKnown RBP5.85□□□□□ -1.47
HMGB1P46-201ENST00000520062 PDCL3Q9H2J4 239 aa5.85□□□□□ -1.47
HMGB1P46-201ENST00000520062 IL21RQ9HBE5 538 aa5.85□□□□□ -1.47
HMGB1P46-201ENST00000520062 USP29Q9HBJ7 922 aa5.85□□□□□ -1.47
HMGB1P46-201ENST00000520062 BEX4Q9NWD9 120 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P46-201ENST00000520062 SLC25A10Q9UBX3 287 aaPredicted RBP5.85□□□□□ -1.47
HMGB1P46-201ENST00000520062 NRBP1Q9UHY1 535 aa5.85□□□□□ -1.47
HMGB1P46-201ENST00000520062 ADAMTS5Q9UNA0 930 aa5.85□□□□□ -1.47
HMGB1P46-201ENST00000520062 DYTNA2CJ06 578 aa5.84□□□□□ -1.47
HMGB1P46-201ENST00000520062 PI4KAP2A4QPH2 592 aa5.84□□□□□ -1.47
HMGB1P46-201ENST00000520062 FAM90A7PA6NKC0 464 aa5.84□□□□□ -1.47
HMGB1P46-201ENST00000520062 FAM90A22PA8MWA6 464 aa5.84□□□□□ -1.47
HMGB1P46-201ENST00000520062 FAM90A12PA8MX19 464 aa5.84□□□□□ -1.47
HMGB1P46-201ENST00000520062 FAM90A23PA8MXZ1 464 aa5.84□□□□□ -1.47
HMGB1P46-201ENST00000520062 TTC34A8MYJ7 566 aa5.84□□□□□ -1.47
HMGB1P46-201ENST00000520062 H0YIZ8 118 aa5.84□□□□□ -1.47
HMGB1P46-201ENST00000520062 QSOX1O00391 747 aa5.84□□□□□ -1.47
HMGB1P46-201ENST00000520062 TTLL1O95922 423 aa5.84□□□□□ -1.47
HMGB1P46-201ENST00000520062 SCGB1D1O95968 90 aa5.84□□□□□ -1.47
HMGB1P46-201ENST00000520062 HKR1P10072 659 aa5.84□□□□□ -1.47
HMGB1P46-201ENST00000520062 ENGP17813 658 aa5.84□□□□□ -1.47
HMGB1P46-201ENST00000520062 RPS6KB1P23443 525 aa5.84□□□□□ -1.47
HMGB1P46-201ENST00000520062 PRKCHP24723 683 aa5.84□□□□□ -1.47
HMGB1P46-201ENST00000520062 PSMA4P25789 261 aaKnown RBP5.84□□□□□ -1.47
HMGB1P46-201ENST00000520062 SLC8A1P32418 973 aa5.84□□□□□ -1.47
HMGB1P46-201ENST00000520062 GRIA3P42263 894 aa5.84□□□□□ -1.47
HMGB1P46-201ENST00000520062 EEFSECP57772 596 aaKnown RBP5.84□□□□□ -1.47
HMGB1P46-201ENST00000520062 TAP1Q03518 808 aa5.84□□□□□ -1.47
HMGB1P46-201ENST00000520062 ERV3-1Q14264 604 aa5.84□□□□□ -1.47
HMGB1P46-201ENST00000520062 GPR162Q16538 588 aa5.84□□□□□ -1.47
HMGB1P46-201ENST00000520062 SLC45A4Q5BKX6 768 aa5.84□□□□□ -1.47
HMGB1P46-201ENST00000520062 HAUS3Q68CZ6 603 aa5.84□□□□□ -1.47
HMGB1P46-201ENST00000520062 KIAA1324Q6UXG2 1013 aaKnown RBP5.84□□□□□ -1.47
HMGB1P46-201ENST00000520062 H1FNTQ75WM6 255 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P46-201ENST00000520062 CHD1LQ86WJ1 897 aa5.84□□□□□ -1.47
HMGB1P46-201ENST00000520062 ZNF366Q8N895 744 aa5.84□□□□□ -1.47
HMGB1P46-201ENST00000520062 RFWD2Q8NHY2 731 aa5.84□□□□□ -1.47
HMGB1P46-201ENST00000520062 KAZALD1Q96I82 304 aa5.84□□□□□ -1.47
HMGB1P46-201ENST00000520062 TIGD1Q96MW7 591 aa5.84□□□□□ -1.47
HMGB1P46-201ENST00000520062 KRTAP3-1Q9BYR8 98 aa5.84□□□□□ -1.47
HMGB1P46-201ENST00000520062 THAP1Q9NVV9 213 aa5.84□□□□□ -1.47
HMGB1P46-201ENST00000520062 NSMCE4AQ9NXX6 385 aa5.84□□□□□ -1.47
HMGB1P46-201ENST00000520062 MTMR4Q9NYA4 1195 aa5.84□□□□□ -1.47
HMGB1P46-201ENST00000520062 HCN3Q9P1Z3 774 aa5.84□□□□□ -1.47
HMGB1P46-201ENST00000520062 RPS6KL1Q9Y6S9 549 aa5.84□□□□□ -1.47
HMGB1P46-201ENST00000520062 FSD2A1L4K1 749 aa5.83□□□□□ -1.48
HMGB1P46-201ENST00000520062 A6NCN8 305 aa5.83□□□□□ -1.48
HMGB1P46-201ENST00000520062 GCOM1H8Y6P7 765 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P46-201ENST00000520062 ORC4O43929 436 aa5.83□□□□□ -1.48
HMGB1P46-201ENST00000520062 SLC3A2P08195 630 aaKnown RBP5.83□□□□□ -1.48
HMGB1P46-201ENST00000520062 ZNF20P17024 532 aa5.83□□□□□ -1.48
HMGB1P46-201ENST00000520062 POLD2P49005 469 aa5.83□□□□□ -1.48
HMGB1P46-201ENST00000520062 MVDP53602 400 aa5.83□□□□□ -1.48
HMGB1P46-201ENST00000520062 PTP4A2Q12974 167 aa5.83□□□□□ -1.48
HMGB1P46-201ENST00000520062 ALKBH1Q13686 389 aaKnown RBP5.83□□□□□ -1.48
HMGB1P46-201ENST00000520062 TUBA3CQ13748 450 aa5.83□□□□□ -1.48
HMGB1P46-201ENST00000520062 RNASE12Q5GAN4 147 aaKnown RBP5.83□□□□□ -1.48
HMGB1P46-201ENST00000520062 TUBA3EQ6PEY2 450 aa5.83□□□□□ -1.48
HMGB1P46-201ENST00000520062 KIRREL2Q6UWL6 708 aa5.83□□□□□ -1.48
HMGB1P46-201ENST00000520062 KYAT3Q6YP21 454 aaKnown RBP5.83□□□□□ -1.48
HMGB1P46-201ENST00000520062 TTLL10Q6ZVT0 673 aa5.83□□□□□ -1.48
HMGB1P46-201ENST00000520062 ZNF804AQ7Z570 1209 aa5.83□□□□□ -1.48
HMGB1P46-201ENST00000520062 LCORLQ8N3X6 602 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms