RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 MGAT5Q09328 741 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 CDK5R2Q13319 367 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 ORC1Q13415 861 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 TFDP2Q14188 446 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 FASTKD3Q14CZ7 662 aaKnown RBP5.24□□□□□ -1.57
SDC2-204ENST00000519914 TMED2Q15363 201 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 ZRSR2Q15696 482 aaKnown RBP5.24□□□□□ -1.57
SDC2-204ENST00000519914 PARP6Q2NL67 630 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 SLC10A6Q3KNW5 377 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 ZNF792Q3KQV3 632 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 DCAF4L1Q3SXM0 396 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 SEZ6Q53EL9 994 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 ZNF648Q5T619 568 aaPredicted RBP5.24□□□□□ -1.57
SDC2-204ENST00000519914 KAZNQ674X7 775 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 NUGGCQ68CJ6 796 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 ARHGAP17Q68EM7 881 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 SLC9A4Q6AI14 798 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 JADE1Q6IE81 842 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 EFCAB12Q6NXP0 572 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 TAPT1Q6NXT6 567 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 MAMDC4Q6UXC1 1216 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 SEZ6L2Q6UXD5 910 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 CYS1Q717R9 158 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 FASTKD5Q7L8L6 764 aaKnown RBP5.24□□□□□ -1.57
SDC2-204ENST00000519914 LIMS2Q7Z4I7 341 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 SDCCAG8Q86SQ7 713 aaPredicted RBP5.24□□□□□ -1.57
SDC2-204ENST00000519914 TMEM110Q86TL2 294 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 ZNF410Q86VK4 478 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 ZDHHC17Q8IUH5 632 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 SRRM1Q8IYB3 904 aaKnown RBP5.24□□□□□ -1.57
SDC2-204ENST00000519914 ANKRD13AQ8IZ07 590 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 BANPQ8N9N5 519 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 FAM181AQ8N9Y4 354 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 MCUQ8NE86 351 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 PPTC7Q8NI37 304 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 SH3TC2Q8TF17 1288 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 DCAKDQ8WVC6 231 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 C10orf82Q8WW14 230 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 DYDC1Q8WWB3 177 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 INPP5DQ92835 1189 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 MIEF2Q96C03 454 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 LRRC39Q96DD0 335 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 WDR89Q96FK6 387 aaPredicted RBP5.24□□□□□ -1.57
SDC2-204ENST00000519914 SPATA33Q96N06 139 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 PWWP2AQ96N64 755 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 ANKRD27Q96NW4 1050 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 TMEM237Q96Q45 408 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 TWNKQ96RR1 684 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 SMC6Q96SB8 1091 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 MMP19Q99542 508 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 TCHPQ9BT92 498 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 C11orf84Q9BUA3 381 aaPredicted RBP5.24□□□□□ -1.57
SDC2-204ENST00000519914 KATNBL1Q9H079 304 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 VPS11Q9H270 941 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 TRABDQ9H4I3 376 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 ZNF576Q9H609 170 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 MINDY3Q9H8M7 445 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 TXNRD2Q9NNW7 524 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 NPHS2Q9NP85 383 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 KLHL14Q9P2G3 628 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 ZNF180Q9UJW8 692 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 USP18Q9UMW8 372 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 FZD1Q9UP38 647 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 AGAP1Q9UPQ3 857 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 TEX264Q9Y6I9 313 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 USH1CQ9Y6N9 552 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 SCN4AP35499 1836 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 TSC2P49815 1807 aa5.24□□□□□ -1.57
SDC2-204ENST00000519914 INO80B-WBP1J3KQ70 363 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 SGK1O00141 431 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 TRDMT1O14717 391 aaKnown RBP5.23□□□□□ -1.57
SDC2-204ENST00000519914 KLF11O14901 512 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 B4GALT5O43286 388 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 DNAJC6O75061 913 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 ZNF189O75820 626 aaPredicted RBP5.23□□□□□ -1.57
SDC2-204ENST00000519914 DCTN3O75935 186 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 RNF8O76064 485 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 TMEM63AO94886 807 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 UNC5CO95185 931 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 PAPLNO95428 1278 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 B3GALT4O96024 378 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 GH1P01241 217 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 LGALS2P05162 132 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 ATP5BP06576 529 aaKnown RBP5.23□□□□□ -1.57
SDC2-204ENST00000519914 FAM87AP0C7U9 286 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 SRGAP2CP0DJJ0 459 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 RBP3P10745 1247 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 HARSP12081 509 aaKnown RBP5.23□□□□□ -1.57
SDC2-204ENST00000519914 ETS1P14921 441 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 ARF4P18085 180 aaPredicted RBP5.23□□□□□ -1.57
SDC2-204ENST00000519914 CYP3A5P20815 502 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 PRKCHP24723 683 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 CD96P40200 585 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 CCNFP41002 786 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 ETV4P43268 484 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 PTPN9P43378 593 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 IFNAR2P48551 515 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 VPS41P49754 854 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 NEK3P51956 506 aa5.23□□□□□ -1.57
SDC2-204ENST00000519914 SNX16P57768 344 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms