RNA–Protein interactions for RNA: ENST00000519767.5

VEGFA-220, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-220ENST00000519767 IRF2BP1Q8IU81 584 aa26.28■■□□□ 1.8
VEGFA-220ENST00000519767 MFN1Q8IWA4 741 aa26.28■■□□□ 1.8
VEGFA-220ENST00000519767 CYB5D2Q8WUJ1 264 aa26.28■■□□□ 1.8
VEGFA-220ENST00000519767 ZDHHC5Q9C0B5 715 aa26.28■■□□□ 1.8
VEGFA-220ENST00000519767 METTL12A8MUP2 240 aa26.27■■□□□ 1.8
VEGFA-220ENST00000519767 PAPSS1O43252 624 aaPredicted RBP26.27■■□□□ 1.8
VEGFA-220ENST00000519767 HLA-EP13747 358 aa26.27■■□□□ 1.8
VEGFA-220ENST00000519767 MTIF2P46199 727 aaKnown RBP26.27■■□□□ 1.8
VEGFA-220ENST00000519767 ZNF252P-AS1Q0IIN9 211 aa26.27■■□□□ 1.8
VEGFA-220ENST00000519767 PTPRNQ16849 979 aa26.27■■□□□ 1.8
VEGFA-220ENST00000519767 TPD52L1Q16890 204 aaPredicted RBP26.27■■□□□ 1.8
VEGFA-220ENST00000519767 ARHGAP44Q17R89 818 aa26.27■■□□□ 1.8
VEGFA-220ENST00000519767 NADSYN1Q6IA69 706 aa26.27■■□□□ 1.8
VEGFA-220ENST00000519767 TTC17Q96AE7 1141 aa26.27■■□□□ 1.8
VEGFA-220ENST00000519767 STIM2Q9P246 746 aa26.27■■□□□ 1.8
VEGFA-220ENST00000519767 ASCC3Q8N3C0 2202 aaKnown RBP26.27■■□□□ 1.8
VEGFA-220ENST00000519767 TNRC6BQ9UPQ9 1833 aaKnown RBP26.26■■□□□ 1.79
VEGFA-220ENST00000519767 A0A1B0GTW7 788 aa26.26■■□□□ 1.79
VEGFA-220ENST00000519767 MEI4A8MW99 385 aa26.26■■□□□ 1.79
VEGFA-220ENST00000519767 E5RJQ4 531 aa26.26■■□□□ 1.79
VEGFA-220ENST00000519767 APOEP02649 317 aa26.26■■□□□ 1.79
VEGFA-220ENST00000519767 GLI1P08151 1106 aa26.26■■□□□ 1.79
VEGFA-220ENST00000519767 PRKCSHP14314 528 aaPredicted RBP26.26■■□□□ 1.79
VEGFA-220ENST00000519767 PON1P27169 355 aa26.26■■□□□ 1.79
VEGFA-220ENST00000519767 CD70P32970 193 aa26.26■■□□□ 1.79
VEGFA-220ENST00000519767 SNX16P57768 344 aa26.26■■□□□ 1.79
VEGFA-220ENST00000519767 SLC14A1Q13336 389 aa26.26■■□□□ 1.79
VEGFA-220ENST00000519767 MS4A13Q5J8X5 152 aa26.26■■□□□ 1.79
VEGFA-220ENST00000519767 GJB7Q6PEY0 223 aa26.26■■□□□ 1.79
VEGFA-220ENST00000519767 PIP4P1Q86T03 277 aa26.26■■□□□ 1.79
VEGFA-220ENST00000519767 MINDY1Q8N5J2 469 aa26.26■■□□□ 1.79
VEGFA-220ENST00000519767 DEFB124Q8NES8 71 aa26.26■■□□□ 1.79
VEGFA-220ENST00000519767 SHC3Q92529 594 aa26.26■■□□□ 1.79
VEGFA-220ENST00000519767 PRSS16Q9NQE7 514 aa26.26■■□□□ 1.79
VEGFA-220ENST00000519767 DNAAF2Q9NVR5 837 aaKnown RBP26.26■■□□□ 1.79
VEGFA-220ENST00000519767 SLC12A6Q9UHW9 1150 aa26.26■■□□□ 1.79
VEGFA-220ENST00000519767 CYTH4Q9UIA0 394 aa26.26■■□□□ 1.79
VEGFA-220ENST00000519767 KMT2BQ9UMN6 2715 aaPredicted RBP26.25■■□□□ 1.79
VEGFA-220ENST00000519767 BECN2A8MW95 431 aa26.25■■□□□ 1.79
VEGFA-220ENST00000519767 ASLP04424 464 aa26.25■■□□□ 1.79
VEGFA-220ENST00000519767 MAOBP27338 520 aa26.25■■□□□ 1.79
VEGFA-220ENST00000519767 ST8SIA6P61647 398 aa26.25■■□□□ 1.79
VEGFA-220ENST00000519767 PTK2Q05397 1052 aa26.25■■□□□ 1.79
VEGFA-220ENST00000519767 PDCLQ13371 301 aa26.25■■□□□ 1.79
VEGFA-220ENST00000519767 EFHC1Q5JVL4 640 aa26.25■■□□□ 1.79
VEGFA-220ENST00000519767 TAC4Q86UU9 113 aa26.25■■□□□ 1.79
VEGFA-220ENST00000519767 FAM114A1Q8IWE2 563 aa26.25■■□□□ 1.79
VEGFA-220ENST00000519767 KDM1BQ8NB78 822 aa26.25■■□□□ 1.79
VEGFA-220ENST00000519767 ADAM32Q8TC27 787 aa26.25■■□□□ 1.79
VEGFA-220ENST00000519767 LMLNQ96KR4 655 aa26.25■■□□□ 1.79
VEGFA-220ENST00000519767 BTN2A3PQ96KV6 586 aa26.25■■□□□ 1.79
VEGFA-220ENST00000519767 NOX5Q96PH1 765 aa26.25■■□□□ 1.79
VEGFA-220ENST00000519767 LHX5Q9H2C1 402 aa26.25■■□□□ 1.79
VEGFA-220ENST00000519767 ACP6Q9NPH0 428 aa26.25■■□□□ 1.79
VEGFA-220ENST00000519767 FSCN3Q9NQT6 498 aa26.25■■□□□ 1.79
VEGFA-220ENST00000519767 SLTMQ9NWH9 1034 aaKnown RBP eCLIP26.25■■□□□ 1.792e-7■■■■□ 22.2
VEGFA-220ENST00000519767 MAP1BP46821 2468 aaKnown RBP26.25■■□□□ 1.79
VEGFA-220ENST00000519767 TRUB2O95900 331 aaKnown RBP26.24■■□□□ 1.79
VEGFA-220ENST00000519767 SLC2A3P11169 496 aa26.24■■□□□ 1.79
VEGFA-220ENST00000519767 RPS24P62847 133 aaKnown RBP26.24■■□□□ 1.79
VEGFA-220ENST00000519767 HNRNPDQ14103 355 aaKnown RBP26.24■■□□□ 1.79
VEGFA-220ENST00000519767 CARNMT1Q8N4J0 409 aa26.24■■□□□ 1.79
VEGFA-220ENST00000519767 WFDC5Q8TCV5 224 aa26.24■■□□□ 1.79
VEGFA-220ENST00000519767 ASNSD1Q9NWL6 643 aa26.24■■□□□ 1.79
VEGFA-220ENST00000519767 PCDHGC3Q9UN70 934 aa26.24■■□□□ 1.79
VEGFA-220ENST00000519767 MOCS3O95396 460 aa26.23■■□□□ 1.79
VEGFA-220ENST00000519767 MOCS2O96007 188 aaPredicted RBP26.23■■□□□ 1.79
VEGFA-220ENST00000519767 ERCC5P28715 1186 aaPredicted RBP26.23■■□□□ 1.79
VEGFA-220ENST00000519767 CDK17Q00537 523 aa26.23■■□□□ 1.79
VEGFA-220ENST00000519767 SFSWAPQ12872 951 aaKnown RBP26.23■■□□□ 1.79
VEGFA-220ENST00000519767 CDH18Q13634 790 aa26.23■■□□□ 1.79
VEGFA-220ENST00000519767 DCAF6Q58WW2 860 aa26.23■■□□□ 1.79
VEGFA-220ENST00000519767 ZC3H12AQ5D1E8 599 aaKnown RBP26.23■■□□□ 1.79
VEGFA-220ENST00000519767 DCAF12L1Q5VU92 463 aa26.23■■□□□ 1.79
VEGFA-220ENST00000519767 PPP1R13BQ96KQ4 1090 aa26.23■■□□□ 1.79
VEGFA-220ENST00000519767 PRICKLE1Q96MT3 831 aaPredicted RBP26.23■■□□□ 1.79
VEGFA-220ENST00000519767 NUCKS1Q9H1E3 243 aaKnown RBP26.23■■□□□ 1.79
VEGFA-220ENST00000519767 CLSTN2Q9H4D0 955 aa26.23■■□□□ 1.79
VEGFA-220ENST00000519767 KIAA1522Q9P206 1035 aaPredicted RBP26.23■■□□□ 1.79
VEGFA-220ENST00000519767 TJP2Q9UDY2 1190 aa26.23■■□□□ 1.79
VEGFA-220ENST00000519767 CEP192Q8TEP8 1941 aa26.23■■□□□ 1.79
VEGFA-220ENST00000519767 CACNA1EQ15878 2313 aa26.22■■□□□ 1.79
VEGFA-220ENST00000519767 PCNX2A6NKB5 2137 aa26.22■■□□□ 1.79
VEGFA-220ENST00000519767 IGLV3-25P01717 112 aa26.22■■□□□ 1.79
VEGFA-220ENST00000519767 DNTTP04053 509 aa26.22■■□□□ 1.79
VEGFA-220ENST00000519767 KRT9P35527 623 aa26.22■■□□□ 1.79
VEGFA-220ENST00000519767 BPIFB4P59827 614 aa26.22■■□□□ 1.79
VEGFA-220ENST00000519767 MTA1Q13330 715 aa26.22■■□□□ 1.79
VEGFA-220ENST00000519767 ARID5BQ14865 1188 aa26.22■■□□□ 1.79
VEGFA-220ENST00000519767 MAN2A1Q16706 1144 aa26.22■■□□□ 1.79
VEGFA-220ENST00000519767 ST3GAL2Q16842 350 aa26.22■■□□□ 1.79
VEGFA-220ENST00000519767 WDTC1Q8N5D0 677 aa26.22■■□□□ 1.79
VEGFA-220ENST00000519767 ATP6V0D2Q8N8Y2 350 aa26.22■■□□□ 1.79
VEGFA-220ENST00000519767 MIR1-1HGQ9H1L0 117 aa26.22■■□□□ 1.79
VEGFA-220ENST00000519767 DACH1Q9UI36 760 aa26.22■■□□□ 1.79
VEGFA-220ENST00000519767 SCML1Q9UN30 329 aa26.22■■□□□ 1.79
VEGFA-220ENST00000519767 KCNU1A8MYU2 1149 aa26.21■■□□□ 1.79
VEGFA-220ENST00000519767 H0Y626 953 aa26.21■■□□□ 1.79
VEGFA-220ENST00000519767 BCAT2O15382 392 aaPredicted RBP26.21■■□□□ 1.79
VEGFA-220ENST00000519767 LUC7L3O95232 432 aaKnown RBP26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms