RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 HEMK1Q9Y5R4 338 aaPredicted RBP5.05□□□□□ -1.6
SQLE-202ENST00000518604 CCDC189A1A4V9 331 aa5.04□□□□□ -1.6
SQLE-202ENST00000518604 LRRC3CA6NJW4 275 aa5.04□□□□□ -1.6
SQLE-202ENST00000518604 PRRT4C9JH25 899 aa5.04□□□□□ -1.6
SQLE-202ENST00000518604 SMIM22K7EJ46 135 aa5.04□□□□□ -1.6
SQLE-202ENST00000518604 PRYO14603 147 aa5.04□□□□□ -1.6
SQLE-202ENST00000518604 USP12O75317 370 aa5.04□□□□□ -1.6
SQLE-202ENST00000518604 KRT38O76015 456 aa5.04□□□□□ -1.6
SQLE-202ENST00000518604 PTH2RP49190 550 aa5.04□□□□□ -1.6
SQLE-202ENST00000518604 ZNF84P51523 738 aa5.04□□□□□ -1.6
SQLE-202ENST00000518604 RBM5P52756 815 aaKnown RBP eCLIP5.04□□□□□ -1.6
SQLE-202ENST00000518604 RCAN1P53805 252 aa5.04□□□□□ -1.6
SQLE-202ENST00000518604 FAM3BP58499 235 aaPredicted RBP5.04□□□□□ -1.6
SQLE-202ENST00000518604 RNASELQ05823 741 aaKnown RBP5.04□□□□□ -1.6
SQLE-202ENST00000518604 GAB1Q13480 694 aa5.04□□□□□ -1.6
SQLE-202ENST00000518604 TAF12Q16514 161 aa5.04□□□□□ -1.6
SQLE-202ENST00000518604 GPR162Q16538 588 aa5.04□□□□□ -1.6
SQLE-202ENST00000518604 FAM110CQ1W6H9 321 aa5.04□□□□□ -1.6
SQLE-202ENST00000518604 CC2D1BQ5T0F9 858 aaKnown RBP5.04□□□□□ -1.6
SQLE-202ENST00000518604 ZNF813Q6ZN06 617 aa5.04□□□□□ -1.6
SQLE-202ENST00000518604 ADGRG3Q86Y34 549 aa5.04□□□□□ -1.6
SQLE-202ENST00000518604 PNLDC1Q8NA58 520 aaKnown RBP5.04□□□□□ -1.6
SQLE-202ENST00000518604 USP38Q8NB14 1042 aa5.04□□□□□ -1.6
SQLE-202ENST00000518604 CSGALNACT1Q8TDX6 532 aa5.04□□□□□ -1.6
SQLE-202ENST00000518604 PNISRQ8TF01 805 aaKnown RBP5.04□□□□□ -1.6
SQLE-202ENST00000518604 USP13Q92995 863 aaPredicted RBP5.04□□□□□ -1.6
SQLE-202ENST00000518604 ZNF764Q96H86 408 aaPredicted RBP5.04□□□□□ -1.6
SQLE-202ENST00000518604 TBATAQ96M53 351 aa5.04□□□□□ -1.6
SQLE-202ENST00000518604 HTATIP2Q9BUP3 242 aa5.04□□□□□ -1.6
SQLE-202ENST00000518604 PRDM13Q9H4Q3 707 aa5.04□□□□□ -1.6
SQLE-202ENST00000518604 ASNSD1Q9NWL6 643 aa5.04□□□□□ -1.6
SQLE-202ENST00000518604 PI4KBQ9UBF8 816 aa5.04□□□□□ -1.6
SQLE-202ENST00000518604 KCND3Q9UK17 655 aa5.04□□□□□ -1.6
SQLE-202ENST00000518604 B3GNT3Q9Y2A9 372 aa5.04□□□□□ -1.6
SQLE-202ENST00000518604 PCDHA10Q9Y5I2 948 aa5.04□□□□□ -1.6
SQLE-202ENST00000518604 LRRFIP2Q9Y608 721 aaKnown RBP5.04□□□□□ -1.6
SQLE-202ENST00000518604 LINC01548A6NM66 108 aa5.03□□□□□ -1.6
SQLE-202ENST00000518604 TISP43B9A030 160 aa5.03□□□□□ -1.6
SQLE-202ENST00000518604 EIF3FO00303 357 aaPredicted RBP5.03□□□□□ -1.6
SQLE-202ENST00000518604 RNF8O76064 485 aa5.03□□□□□ -1.6
SQLE-202ENST00000518604 HEXIM1O94992 359 aaKnown RBP5.03□□□□□ -1.6
SQLE-202ENST00000518604 PRKCGP05129 697 aa5.03□□□□□ -1.6
SQLE-202ENST00000518604 CYP2A6P11509 494 aaPredicted RBP5.03□□□□□ -1.6
SQLE-202ENST00000518604 TNNT1P13805 278 aa5.03□□□□□ -1.6
SQLE-202ENST00000518604 STAT6P42226 847 aa5.03□□□□□ -1.6
SQLE-202ENST00000518604 VPS41P49754 854 aa5.03□□□□□ -1.6
SQLE-202ENST00000518604 TFF2Q03403 129 aa5.03□□□□□ -1.6
SQLE-202ENST00000518604 DMWDQ09019 674 aa5.03□□□□□ -1.6
SQLE-202ENST00000518604 SLC10A2Q12908 348 aaPredicted RBP5.03□□□□□ -1.6
SQLE-202ENST00000518604 SLC14A1Q13336 389 aa5.03□□□□□ -1.6
SQLE-202ENST00000518604 CTXN3Q4LDR2 81 aa5.03□□□□□ -1.6
SQLE-202ENST00000518604 SYT13Q7L8C5 426 aa5.03□□□□□ -1.6
SQLE-202ENST00000518604 RD3Q7Z3Z2 195 aa5.03□□□□□ -1.6
SQLE-202ENST00000518604 UEVLDQ8IX04 471 aa5.03□□□□□ -1.6
SQLE-202ENST00000518604 KTI12Q96EK9 354 aaPredicted RBP5.03□□□□□ -1.6
SQLE-202ENST00000518604 CHODLQ9H9P2 273 aa5.03□□□□□ -1.6
SQLE-202ENST00000518604 PRDM16Q9HAZ2 1276 aa5.03□□□□□ -1.6
SQLE-202ENST00000518604 ARL8BQ9NVJ2 186 aa5.03□□□□□ -1.6
SQLE-202ENST00000518604 GJD2Q9UKL4 321 aa5.03□□□□□ -1.6
SQLE-202ENST00000518604 LZTS1Q9Y250 596 aa5.03□□□□□ -1.6
SQLE-202ENST00000518604 COPG1Q9Y678 874 aaKnown RBP5.03□□□□□ -1.6
SQLE-202ENST00000518604 CNPP09543 421 aaKnown RBP5.02□□□□□ -1.61
SQLE-202ENST00000518604 CYP2D6P10635 497 aa5.02□□□□□ -1.61
SQLE-202ENST00000518604 TACR3P29371 465 aa5.02□□□□□ -1.61
SQLE-202ENST00000518604 MAPK9P45984 424 aa5.02□□□□□ -1.61
SQLE-202ENST00000518604 SLC37A1P57057 533 aa5.02□□□□□ -1.61
SQLE-202ENST00000518604 ANKRD1Q15327 319 aa5.02□□□□□ -1.61
SQLE-202ENST00000518604 KRTAP15-1Q3LI76 137 aa5.02□□□□□ -1.61
SQLE-202ENST00000518604 ZNF788Q6ZQV5 615 aa5.02□□□□□ -1.61
SQLE-202ENST00000518604 ENDOVQ8N8Q3 282 aaKnown RBP5.02□□□□□ -1.61
SQLE-202ENST00000518604 C8orf58Q8NAV2 365 aa5.02□□□□□ -1.61
SQLE-202ENST00000518604 CELF1Q92879 486 aaKnown RBP5.02□□□□□ -1.61
SQLE-202ENST00000518604 RILPL2Q969X0 211 aa5.02□□□□□ -1.61
SQLE-202ENST00000518604 ZG16BQ96DA0 208 aa5.02□□□□□ -1.61
SQLE-202ENST00000518604 SEMA4CQ9C0C4 833 aa5.02□□□□□ -1.61
SQLE-202ENST00000518604 R3HDMLQ9H3Y0 253 aa5.02□□□□□ -1.61
SQLE-202ENST00000518604 PDE11AQ9HCR9 933 aa5.02□□□□□ -1.61
SQLE-202ENST00000518604 RIC8AQ9NPQ8 531 aa5.02□□□□□ -1.61
SQLE-202ENST00000518604 SAGE1Q9NXZ1 904 aa5.02□□□□□ -1.61
SQLE-202ENST00000518604 RRP7AQ9Y3A4 280 aaKnown RBP5.02□□□□□ -1.61
SQLE-202ENST00000518604 COL11A2P13942 1736 aaPredicted RBP5.02□□□□□ -1.61
SQLE-202ENST00000518604 AGAP5A6NIR3 686 aa5.01□□□□□ -1.61
SQLE-202ENST00000518604 C16orf96A6NNT2 1141 aa5.01□□□□□ -1.61
SQLE-202ENST00000518604 NCAM2O15394 837 aa5.01□□□□□ -1.61
SQLE-202ENST00000518604 TSPAN3O60637 253 aa5.01□□□□□ -1.61
SQLE-202ENST00000518604 KAT7O95251 611 aa5.01□□□□□ -1.61
SQLE-202ENST00000518604 CYP21A2P08686 494 aa5.01□□□□□ -1.61
SQLE-202ENST00000518604 NHLRC4P0CG21 123 aaPredicted RBP5.01□□□□□ -1.61
SQLE-202ENST00000518604 CHN1P15882 459 aa5.01□□□□□ -1.61
SQLE-202ENST00000518604 RXRAP19793 462 aa5.01□□□□□ -1.61
SQLE-202ENST00000518604 TGM2P21980 687 aa5.01□□□□□ -1.61
SQLE-202ENST00000518604 PNPLA4P41247 253 aa5.01□□□□□ -1.61
SQLE-202ENST00000518604 INHBEP58166 350 aa5.01□□□□□ -1.61
SQLE-202ENST00000518604 HSF1Q00613 529 aa5.01□□□□□ -1.61
SQLE-202ENST00000518604 TLE2Q04725 743 aa5.01□□□□□ -1.61
SQLE-202ENST00000518604 KPNB1Q14974 876 aaKnown RBP5.01□□□□□ -1.61
SQLE-202ENST00000518604 ALFQ53S48 1182 aa5.01□□□□□ -1.61
SQLE-202ENST00000518604 LRRTM4Q86VH4 590 aa5.01□□□□□ -1.61
SQLE-202ENST00000518604 RFX6Q8HWS3 928 aa5.01□□□□□ -1.61
SQLE-202ENST00000518604 CEP70Q8NHQ1 597 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms