RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 PRPF4BQ13523 1007 aaKnown RBP6.13□□□□□ -1.43
CTNNA1-202ENST00000517533 HLXQ14774 488 aaPredicted RBP6.13□□□□□ -1.43
CTNNA1-202ENST00000517533 R3HDM1Q15032 1099 aaKnown RBP6.13□□□□□ -1.43
CTNNA1-202ENST00000517533 KYNUQ16719 465 aa6.13□□□□□ -1.43
CTNNA1-202ENST00000517533 BEAN1Q3B7T3 259 aa6.13□□□□□ -1.43
CTNNA1-202ENST00000517533 NRN1LQ496H8 165 aa6.13□□□□□ -1.43
CTNNA1-202ENST00000517533 DEPDC1Q5TB30 811 aa6.13□□□□□ -1.43
CTNNA1-202ENST00000517533 ZNF585AQ6P3V2 769 aa6.13□□□□□ -1.43
CTNNA1-202ENST00000517533 DCLRE1AQ6PJP8 1040 aa6.13□□□□□ -1.43
CTNNA1-202ENST00000517533 FOXR2Q6PJQ5 311 aa6.13□□□□□ -1.43
CTNNA1-202ENST00000517533 MICALCLQ6ZW33 695 aa6.13□□□□□ -1.43
CTNNA1-202ENST00000517533 CATSPER4Q7RTX7 472 aa6.13□□□□□ -1.43
CTNNA1-202ENST00000517533 CCDC91Q7Z6B0 441 aa6.13□□□□□ -1.43
CTNNA1-202ENST00000517533 SLFN11Q7Z7L1 901 aa6.13□□□□□ -1.43
CTNNA1-202ENST00000517533 SLC15A3Q8IY34 581 aa6.13□□□□□ -1.43
CTNNA1-202ENST00000517533 SPARTQ8N0X7 666 aa6.13□□□□□ -1.43
CTNNA1-202ENST00000517533 ABRAQ8N0Z2 381 aa6.13□□□□□ -1.43
CTNNA1-202ENST00000517533 TEX9Q8N6V9 391 aa6.13□□□□□ -1.43
CTNNA1-202ENST00000517533 LINS1Q8NG48 757 aa6.13□□□□□ -1.43
CTNNA1-202ENST00000517533 LILRB1Q8NHL6 650 aaPredicted RBP6.13□□□□□ -1.43
CTNNA1-202ENST00000517533 NFKBIDQ8NI38 313 aa6.13□□□□□ -1.43
CTNNA1-202ENST00000517533 ZFPM2Q8WW38 1151 aa6.13□□□□□ -1.43
CTNNA1-202ENST00000517533 CPT1BQ92523 772 aa6.13□□□□□ -1.43
CTNNA1-202ENST00000517533 SNX19Q92543 992 aa6.13□□□□□ -1.43
CTNNA1-202ENST00000517533 RNF31Q96EP0 1072 aa6.13□□□□□ -1.43
CTNNA1-202ENST00000517533 ZNF845Q96IR2 970 aaPredicted RBP6.13□□□□□ -1.43
CTNNA1-202ENST00000517533 TEPSINQ96N21 525 aa6.13□□□□□ -1.43
CTNNA1-202ENST00000517533 HAPLN3Q96S86 360 aa6.13□□□□□ -1.43
CTNNA1-202ENST00000517533 ALOXE3Q9BYJ1 711 aa6.13□□□□□ -1.43
CTNNA1-202ENST00000517533 AKIP1Q9NQ31 210 aa6.13□□□□□ -1.43
CTNNA1-202ENST00000517533 PCDHB16Q9NRJ7 776 aa6.13□□□□□ -1.43
CTNNA1-202ENST00000517533 NDUFAF4Q9P032 175 aa6.13□□□□□ -1.43
CTNNA1-202ENST00000517533 RNF181Q9P0P0 153 aa6.13□□□□□ -1.43
CTNNA1-202ENST00000517533 DNAJB11Q9UBS4 358 aa6.13□□□□□ -1.43
CTNNA1-202ENST00000517533 RIMKLBQ9ULI2 386 aa6.13□□□□□ -1.43
CTNNA1-202ENST00000517533 KNSTRNQ9Y448 316 aa6.13□□□□□ -1.43
CTNNA1-202ENST00000517533 A0A1W2PQ09 198 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 MYADML2A6NDP7 307 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 KIF28PB7ZC32 967 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 RPP40O75818 363 aaKnown RBP6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 SLC4A1P02730 911 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 ATP5BP06576 529 aaKnown RBP6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 ATP5F1P24539 256 aaPredicted RBP6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 GCH1P30793 250 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 HPDP32754 393 aaPredicted RBP6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 KIF5BP33176 963 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 HNF4AP41235 474 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 GARSP41250 739 aaKnown RBP6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 MSH2P43246 934 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 PGDP52209 483 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 VAV2P52735 878 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 HSD17B7P56937 341 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 AIMP1Q12904 312 aaKnown RBP6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 PTP4A2Q12974 167 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 RESTQ13127 1097 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 FZD5Q13467 585 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 E2F2Q14209 437 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 PUM1Q14671 1186 aaKnown RBP eCLIP6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 NFIXQ14938 502 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 LRRC24Q50LG9 513 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 SHQ1Q6PI26 577 aaKnown RBP6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 INO80CQ6PI98 192 aaPredicted RBP6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 CASC1Q6TDU7 716 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 SYNE3Q6ZMZ3 975 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 GPR149Q86SP6 731 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 SDCCAG8Q86SQ7 713 aaPredicted RBP6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 ERC1Q8IUD2 1116 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 NUP93Q8N1F7 819 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 ETNPPLQ8TBG4 499 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 SH3RF3Q8TEJ3 882 aaPredicted RBP6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 SMCR8Q8TEV9 937 aaPredicted RBP6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 LPIN2Q92539 896 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 GRAMD1AQ96CP6 724 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 KTI12Q96EK9 354 aaPredicted RBP6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 ZDHHC12Q96GR4 267 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 WDR24Q96S15 920 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 OSBPL9Q96SU4 736 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 C17orf80Q9BSJ5 609 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 MECRQ9BV79 373 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 KLC2Q9H0B6 622 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 TTYH1Q9H313 450 aaPredicted RBP6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 RABEP2Q9H5N1 569 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 PLEKHA2Q9HB19 425 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 PDRG1Q9NUG6 133 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 TMEM74BQ9NUR3 256 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 HCFC1R1Q9NWW0 138 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 RASAL2Q9UJF2 1139 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 NEU2Q9Y3R4 380 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 LYVE1Q9Y5Y7 322 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 FAM169AQ9Y6X4 670 aa6.12□□□□□ -1.43
CTNNA1-202ENST00000517533 KDM3AQ9Y4C1 1321 aa6.11□□□□□ -1.43
CTNNA1-202ENST00000517533 PNMA6EA0A0J9YXQ4 647 aa6.11□□□□□ -1.43
CTNNA1-202ENST00000517533 UNC119BA6NIH7 251 aa6.11□□□□□ -1.43
CTNNA1-202ENST00000517533 A8MV72 311 aaPredicted RBP6.11□□□□□ -1.43
CTNNA1-202ENST00000517533 CYP27B1O15528 508 aa6.11□□□□□ -1.43
CTNNA1-202ENST00000517533 RECQL4O94761 1208 aa6.11□□□□□ -1.43
CTNNA1-202ENST00000517533 NDUFA10O95299 355 aa6.11□□□□□ -1.43
CTNNA1-202ENST00000517533 AFPP02771 609 aaKnown RBP6.11□□□□□ -1.43
CTNNA1-202ENST00000517533 PPP3CBP16298 524 aa6.11□□□□□ -1.43
CTNNA1-202ENST00000517533 STMN1P16949 149 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms