RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 LINGO3P0C6S8 592 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 OAZ1P54368 228 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 BST2Q10589 180 aaKnown RBP11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 CTXN3Q4LDR2 81 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 DPY19L2P1Q6NXN4 242 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 SH3BP5LQ7L8J4 393 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 ULK2Q8IYT8 1036 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 SLC2A14Q8TDB8 520 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 ASPSCR1Q9BZE9 553 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 ABHD16BQ9H3Z7 469 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 RABGEF1Q9UJ41 708 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 UBIAD1Q9Y5Z9 338 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 WASF2Q9Y6W5 498 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 ARAP2Q8WZ64 1704 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 TCRBV9S1A1TA0A576 114 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 AKAP10O43572 662 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 ZNF189O75820 626 aaPredicted RBP11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 PYGLP06737 847 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 AMPD1P23109 780 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 KLRC2P26717 231 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 ST8SIA6P61647 398 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 SLC25A3Q00325 362 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 CDH18Q13634 790 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 SNX17Q15036 470 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 GSTA3Q16772 222 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 FAM83EQ2M2I3 478 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 TCHHL1Q5QJ38 904 aaPredicted RBP11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 ADGRD1Q6QNK2 874 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 NPNTQ6UXI9 565 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 DEFB107AQ8IZN7 70 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 BSNDQ8WZ55 320 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 EME1Q96AY2 570 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 CLPTM1LQ96KA5 538 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 PGLYRP2Q96PD5 576 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 SYT17Q9BSW7 474 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 PHACTR1Q9C0D0 580 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 IARS2Q9NSE4 1012 aaKnown RBP11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 NUDT5Q9UKK9 219 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 V9GYQ6 96 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 NAV1Q8NEY1 1877 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 APOC4-APOC2K7ER74 178 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 TMCC1O94876 653 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 APOC2P02655 101 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 CYP1A1P04798 512 aaPredicted RBP11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 GJB1P08034 283 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 MIPP30301 263 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 BEX3Q00994 111 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 UBAP2LQ14157 1087 aaKnown RBP11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 LINC00523Q86TU6 105 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 UNC45BQ8IWX7 931 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 COLGALT1Q8NBJ5 622 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 CPT1BQ92523 772 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 CNBD2Q96M20 576 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 PORCNQ9H237 461 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 ASB7Q9H672 318 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 LNPEPQ9UIQ6 1025 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 MYPNQ86TC9 1320 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 E5RJQ4 531 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 STRNO43815 780 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 TPST1O60507 370 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 TSPAN3O60637 253 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 CKMP06732 381 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 MAP4P27816 1152 aaKnown RBP11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 YWHAZP63104 245 aaKnown RBP11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 ARHGEF7Q14155 803 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 SLC27A1Q6PCB7 646 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 ADCK2Q7Z695 626 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 STRA8Q7Z7C7 330 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 TTC7BQ86TV6 843 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 FIZ1Q96SL8 496 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 SYT15Q9BQS2 421 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 MRIQ9BWK5 157 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 ARHGAP26Q9UNA1 814 aa11.1□□□□□ -0.63
PCDHGA1-202ENST00000517417 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 SLC12A8A0AV02 714 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 MICAL2O94851 1124 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 MT-CO1P00395 513 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 GRIK3Q13003 919 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 ZNF177Q13360 481 aaPredicted RBP11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 CES3Q6UWW8 571 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 ISLR2Q6UXK2 745 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 TFAP2DQ7Z6R9 452 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 ATP6V0D2Q8N8Y2 350 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 CATSPER1Q8NEC5 780 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 WNK4Q96J92 1243 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 ILKAPQ9H0C8 392 aaPredicted RBP11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 ATXN3LQ9H3M9 355 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 LRRC40Q9H9A6 602 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 COG4Q9H9E3 785 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 THAP1Q9NVV9 213 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 ITGA11Q9UKX5 1188 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 CDYLQ9Y232 598 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 COQ4Q9Y3A0 265 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 BTAF1O14981 1849 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 GLRA3O75311 464 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 AVILO75366 819 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 SLC2A3P11169 496 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 ETS2P15036 469 aa11.09□□□□□ -0.63
PCDHGA1-202ENST00000517417 KCNA4P22459 653 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms