RNA–Protein interactions for RNA: ENST00000516884.1

SNORA40.15-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 107 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.15-201ENST00000516884 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.48□□□□□ -2.01
SNORA40.15-201ENST00000516884 KDELC2Q7Z4H8 507 aa2.48□□□□□ -2.01
SNORA40.15-201ENST00000516884 GPSM1Q86YR5 675 aa2.48□□□□□ -2.01
SNORA40.15-201ENST00000516884 STAG1Q8WVM7 1258 aa2.48□□□□□ -2.01
SNORA40.15-201ENST00000516884 SEZ6LQ9BYH1 1024 aa2.48□□□□□ -2.01
SNORA40.15-201ENST00000516884 TM6SF1Q9BZW5 370 aa2.48□□□□□ -2.01
SNORA40.15-201ENST00000516884 AAMDCQ9H7C9 122 aa2.48□□□□□ -2.01
SNORA40.15-201ENST00000516884 ZBTB26Q9HCK0 441 aa2.48□□□□□ -2.01
SNORA40.15-201ENST00000516884 PLEKHB1Q9UF11 243 aaPredicted RBP2.48□□□□□ -2.01
SNORA40.15-201ENST00000516884 IPO11Q9UI26 975 aaKnown RBP2.48□□□□□ -2.01
SNORA40.15-201ENST00000516884 ITGB1BP2Q9UKP3 347 aa2.48□□□□□ -2.01
SNORA40.15-201ENST00000516884 OGDHLQ9ULD0 1010 aa2.48□□□□□ -2.01
SNORA40.15-201ENST00000516884 VPS4AQ9UN37 437 aa2.48□□□□□ -2.01
SNORA40.15-201ENST00000516884 GXYLT2A0PJZ3 443 aa2.47□□□□□ -2.01
SNORA40.15-201ENST00000516884 OR6C75A6NL08 312 aa2.47□□□□□ -2.01
SNORA40.15-201ENST00000516884 CLCA1A8K7I4 914 aa2.47□□□□□ -2.01
SNORA40.15-201ENST00000516884 FOXO6A8MYZ6 492 aa2.47□□□□□ -2.01
SNORA40.15-201ENST00000516884 BTBD18B2RXH4 712 aa2.47□□□□□ -2.01
SNORA40.15-201ENST00000516884 M0QZQ0 153 aa2.47□□□□□ -2.01
SNORA40.15-201ENST00000516884 RHODO00212 210 aa2.47□□□□□ -2.01
SNORA40.15-201ENST00000516884 DHHO43323 396 aa2.47□□□□□ -2.01
SNORA40.15-201ENST00000516884 LDB3O75112 727 aa2.47□□□□□ -2.01
SNORA40.15-201ENST00000516884 CAMTA2O94983 1202 aa2.47□□□□□ -2.01
SNORA40.15-201ENST00000516884 RPL17P18621 184 aaKnown RBP2.47□□□□□ -2.01
SNORA40.15-201ENST00000516884 COMPP49747 757 aaPredicted RBP2.47□□□□□ -2.01
SNORA40.15-201ENST00000516884 EPHB1P54762 984 aa2.47□□□□□ -2.01
SNORA40.15-201ENST00000516884 ABATP80404 500 aa2.47□□□□□ -2.01
SNORA40.15-201ENST00000516884 GAD2Q05329 585 aa2.47□□□□□ -2.01
SNORA40.15-201ENST00000516884 GPS2Q13227 327 aa2.47□□□□□ -2.01
SNORA40.15-201ENST00000516884 ELF2Q15723 593 aa2.47□□□□□ -2.01
SNORA40.15-201ENST00000516884 ANXA2RQ3ZCQ2 193 aa2.47□□□□□ -2.01
SNORA40.15-201ENST00000516884 TMEM196Q5HYL7 178 aa2.47□□□□□ -2.01
SNORA40.15-201ENST00000516884 TTC39AQ5SRH9 613 aa2.47□□□□□ -2.01
SNORA40.15-201ENST00000516884 DHRS13Q6UX07 377 aa2.47□□□□□ -2.01
SNORA40.15-201ENST00000516884 PIK3AP1Q6ZUJ8 805 aa2.47□□□□□ -2.01
SNORA40.15-201ENST00000516884 CHST15Q7LFX5 561 aaPredicted RBP2.47□□□□□ -2.01
SNORA40.15-201ENST00000516884 C16orf82Q7Z2V1 217 aa2.47□□□□□ -2.01
SNORA40.15-201ENST00000516884 ABHD5Q8WTS1 349 aa2.47□□□□□ -2.01
SNORA40.15-201ENST00000516884 GPATCH3Q96I76 525 aa2.47□□□□□ -2.01
SNORA40.15-201ENST00000516884 ZNF347Q96SE7 839 aa2.47□□□□□ -2.01
SNORA40.15-201ENST00000516884 STRBPQ96SI9 672 aaKnown RBP2.47□□□□□ -2.01
SNORA40.15-201ENST00000516884 ELOVL1Q9BW60 279 aa2.47□□□□□ -2.01
SNORA40.15-201ENST00000516884 TRIM2Q9C040 744 aa2.47□□□□□ -2.01
SNORA40.15-201ENST00000516884 BTBD1Q9H0C5 482 aa2.47□□□□□ -2.01
SNORA40.15-201ENST00000516884 ISCUQ9H1K1 167 aa2.47□□□□□ -2.01
SNORA40.15-201ENST00000516884 ZNF287Q9HBT7 754 aa2.47□□□□□ -2.01
SNORA40.15-201ENST00000516884 KRCC1Q9NPI7 259 aaPredicted RBP2.47□□□□□ -2.01
SNORA40.15-201ENST00000516884 HEYLQ9NQ87 328 aaPredicted RBP2.47□□□□□ -2.01
SNORA40.15-201ENST00000516884 PCDHGB1Q9Y5G3 927 aa2.47□□□□□ -2.01
SNORA40.15-201ENST00000516884 SCN5AQ14524 2016 aa2.46□□□□□ -2.02
SNORA40.15-201ENST00000516884 BECN2A8MW95 431 aa2.46□□□□□ -2.02
SNORA40.15-201ENST00000516884 F8W8V4 182 aa2.46□□□□□ -2.02
SNORA40.15-201ENST00000516884 GOLIM4O00461 696 aa2.46□□□□□ -2.02
SNORA40.15-201ENST00000516884 ANXA2P07355 339 aaKnown RBP2.46□□□□□ -2.02
SNORA40.15-201ENST00000516884 U2AF1L5P0DN76 240 aaPredicted RBP2.46□□□□□ -2.02
SNORA40.15-201ENST00000516884 CPA1P15085 419 aa2.46□□□□□ -2.02
SNORA40.15-201ENST00000516884 ARSBP15848 533 aa2.46□□□□□ -2.02
SNORA40.15-201ENST00000516884 RHCEP18577 417 aa2.46□□□□□ -2.02
SNORA40.15-201ENST00000516884 DRD1P21728 446 aa2.46□□□□□ -2.02
SNORA40.15-201ENST00000516884 HOXD3P31249 432 aaPredicted RBP2.46□□□□□ -2.02
SNORA40.15-201ENST00000516884 ATICP31939 592 aa2.46□□□□□ -2.02
SNORA40.15-201ENST00000516884 RFX5P48382 616 aaPredicted RBP2.46□□□□□ -2.02
SNORA40.15-201ENST00000516884 U2AF1Q01081 240 aaKnown RBP eCLIP2.46□□□□□ -2.02
SNORA40.15-201ENST00000516884 POU5F1BQ06416 359 aa2.46□□□□□ -2.02
SNORA40.15-201ENST00000516884 DDR1Q08345 913 aa2.46□□□□□ -2.02
SNORA40.15-201ENST00000516884 ILF3Q12906 894 aaKnown RBP eCLIP2.46□□□□□ -2.02
SNORA40.15-201ENST00000516884 TRAF1Q13077 416 aa2.46□□□□□ -2.02
SNORA40.15-201ENST00000516884 GPS1Q13098 491 aa2.46□□□□□ -2.02
SNORA40.15-201ENST00000516884 SEMA3BQ13214 749 aa2.46□□□□□ -2.02
SNORA40.15-201ENST00000516884 PTPROQ16827 1216 aa2.46□□□□□ -2.02
SNORA40.15-201ENST00000516884 FAM76BQ5HYJ3 339 aa2.46□□□□□ -2.02
SNORA40.15-201ENST00000516884 RNF220Q5VTB9 566 aa2.46□□□□□ -2.02
SNORA40.15-201ENST00000516884 C8orf82Q6P1X6 216 aaPredicted RBP2.46□□□□□ -2.02
SNORA40.15-201ENST00000516884 ARMC9Q7Z3E5 817 aa2.46□□□□□ -2.02
SNORA40.15-201ENST00000516884 CTU1Q7Z7A3 348 aaKnown RBP2.46□□□□□ -2.02
SNORA40.15-201ENST00000516884 KAT2AQ92830 837 aa2.46□□□□□ -2.02
SNORA40.15-201ENST00000516884 GPR78Q96P69 363 aa2.46□□□□□ -2.02
SNORA40.15-201ENST00000516884 FAM204AQ9H8W3 233 aa2.46□□□□□ -2.02
SNORA40.15-201ENST00000516884 KCNK9Q9NPC2 374 aa2.46□□□□□ -2.02
SNORA40.15-201ENST00000516884 ZIM2Q9NZV7 527 aa2.46□□□□□ -2.02
SNORA40.15-201ENST00000516884 B3GNT3Q9Y2A9 372 aa2.46□□□□□ -2.02
SNORA40.15-201ENST00000516884 NOP58Q9Y2X3 529 aaKnown RBP2.46□□□□□ -2.02
SNORA40.15-201ENST00000516884 A0A1B0GVT2 93 aa2.45□□□□□ -2.02
SNORA40.15-201ENST00000516884 DPPA5A6NC42 116 aa2.45□□□□□ -2.02
SNORA40.15-201ENST00000516884 SLC16A5O15375 505 aa2.45□□□□□ -2.02
SNORA40.15-201ENST00000516884 CNTN5O94779 1100 aa2.45□□□□□ -2.02
SNORA40.15-201ENST00000516884 ZBED1O96006 694 aa2.45□□□□□ -2.02
SNORA40.15-201ENST00000516884 GLUD1P00367 558 aa2.45□□□□□ -2.02
SNORA40.15-201ENST00000516884 CGAP01215 116 aa2.45□□□□□ -2.02
SNORA40.15-201ENST00000516884 PDGFRBP09619 1106 aa2.45□□□□□ -2.02
SNORA40.15-201ENST00000516884 IGFBP2P18065 325 aa2.45□□□□□ -2.02
SNORA40.15-201ENST00000516884 TGM2P21980 687 aa2.45□□□□□ -2.02
SNORA40.15-201ENST00000516884 TCEA1P23193 301 aaKnown RBP2.45□□□□□ -2.02
SNORA40.15-201ENST00000516884 GLUD2P49448 558 aa2.45□□□□□ -2.02
SNORA40.15-201ENST00000516884 PDLIM4P50479 330 aa2.45□□□□□ -2.02
SNORA40.15-201ENST00000516884 DLX5P56178 289 aa2.45□□□□□ -2.02
SNORA40.15-201ENST00000516884 SELENOVP59797 346 aa2.45□□□□□ -2.02
SNORA40.15-201ENST00000516884 SEC61A1P61619 476 aaKnown RBP2.45□□□□□ -2.02
SNORA40.15-201ENST00000516884 COASYQ13057 564 aa2.45□□□□□ -2.02
SNORA40.15-201ENST00000516884 IZUMO4Q1ZYL8 232 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms