RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-224ENST00000515711 FNIP2Q9P278 1114 aa12.33□□□□□ -0.44
LMNA-224ENST00000515711 OR12D3Q9UGF7 316 aa12.33□□□□□ -0.44
LMNA-224ENST00000515711 PCDHB12Q9Y5F1 795 aa12.33□□□□□ -0.44
LMNA-224ENST00000515711 NFS1Q9Y697 457 aa12.33□□□□□ -0.44
LMNA-224ENST00000515711 MRPL42Q9Y6G3 142 aaKnown RBP12.33□□□□□ -0.44
LMNA-224ENST00000515711 OBSL1O75147 1896 aa12.33□□□□□ -0.44
LMNA-224ENST00000515711 PLXNA4Q9HCM2 1894 aa12.33□□□□□ -0.44
LMNA-224ENST00000515711 BDP1A6H8Y1 2624 aa12.33□□□□□ -0.44
LMNA-224ENST00000515711 CLUHO75153 1309 aa12.33□□□□□ -0.44
LMNA-224ENST00000515711 C5orf60A6NFR6 353 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 SLC38A8A6NNN8 435 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 OPHN1O60890 802 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 GCATO75600 419 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 VNN2O95498 520 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 TTC4O95801 387 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 IVLP07476 585 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 CSH1P0DML2 217 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 CSH2P0DML3 217 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 ETS1P14921 441 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 TSHRP16473 764 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 ERCC2P18074 760 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 ITGB8P26012 769 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 RBL1P28749 1068 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 OR1D2P34982 312 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 CHKAP35790 457 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 FDFT1P37268 417 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 MAGEA6P43360 314 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 BASP1P80723 227 aaKnown RBP12.32□□□□□ -0.44
LMNA-224ENST00000515711 COG7P83436 770 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 FPGSQ05932 587 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 DUSP4Q13115 394 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 CBLBQ13191 982 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 VEPH1Q14D04 833 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 PRKD1Q15139 912 aaPredicted RBP12.32□□□□□ -0.44
LMNA-224ENST00000515711 TRIP4Q15650 581 aaPredicted RBP12.32□□□□□ -0.44
LMNA-224ENST00000515711 CCDC85BQ15834 202 aaPredicted RBP12.32□□□□□ -0.44
LMNA-224ENST00000515711 HIF1AQ16665 826 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 AGBL2Q5U5Z8 902 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 SDHAF4Q5VUM1 108 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 TAS1R1Q7RTX1 841 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 LZTR1Q8N653 840 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 ATP6V0D2Q8N8Y2 350 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 NAT8LQ8N9F0 302 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 ZNF461Q8TAF7 563 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 FAM76AQ8TAV0 307 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 HTR3CQ8WXA8 447 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 CPT1BQ92523 772 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 CASP10Q92851 521 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 HDAC11Q96DB2 347 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 VN1R3Q9BXE9 311 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 ROPN1BQ9BZX4 212 aaPredicted RBP12.32□□□□□ -0.44
LMNA-224ENST00000515711 EPB41L4BQ9H329 900 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 PPCSQ9HAB8 311 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 ROPN1Q9HAT0 212 aaPredicted RBP12.32□□□□□ -0.44
LMNA-224ENST00000515711 TMBIM4Q9HC24 238 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 SLC12A6Q9UHW9 1150 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 SHROOM3Q8TF72 1996 aa12.32□□□□□ -0.44
LMNA-224ENST00000515711 ANAPC1Q9H1A4 1944 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 A0A0A0MRY4 1105 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 KCNU1A8MYU2 1149 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 ABLIM3O94929 683 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 FGBP02675 491 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 ZDHHC11BP0C7U3 371 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 ATF6P18850 670 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 TPSB2P20231 275 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 EPHB2P29323 1055 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 ATP5DP30049 168 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 PPP3CCP48454 512 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 TBX4P57082 545 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 USP46P62068 366 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 HTRA4P83105 476 aaPredicted RBP12.31□□□□□ -0.44
LMNA-224ENST00000515711 RING1Q06587 406 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 SLC10A2Q12908 348 aaPredicted RBP12.31□□□□□ -0.44
LMNA-224ENST00000515711 TAF10Q12962 218 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 PLD1Q13393 1074 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 RAB33AQ14088 237 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 TPSAB1Q15661 275 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 KRT71Q3SY84 523 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 SNX30Q5VWJ9 437 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 ARHGEF18Q6ZSZ5 1173 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 PRUNE1Q86TP1 453 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 PDIK1LQ8N165 341 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 VPS52Q8N1B4 723 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 EXOC4Q96A65 974 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 SLC39A13Q96H72 371 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 ATP6V1G3Q96LB4 118 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 C1orf74Q96LT6 269 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 SPATA13Q96N96 652 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 VAT1Q99536 393 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 CLSTN3Q9BQT9 956 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 CCDC77Q9BR77 488 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 SEMA4AQ9H3S1 761 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 TMPRSS4Q9NRS4 437 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 MRPL17Q9NRX2 175 aaKnown RBP12.31□□□□□ -0.44
LMNA-224ENST00000515711 ETNK2Q9NVF9 386 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.31□□□□□ -0.44
LMNA-224ENST00000515711 SFMBT1Q9UHJ3 866 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 SLC27A5Q9Y2P5 690 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 DENND4CQ5VZ89 1909 aa12.31□□□□□ -0.44
LMNA-224ENST00000515711 PIEZO1Q92508 2521 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms