RNA–Protein interactions for RNA: ENST00000515355.5

SUB1-213, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SUB1, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-213ENST00000515355 JOSD2Q8TAC2 188 aa11.93□□□□□ -0.5
SUB1-213ENST00000515355 UCMAQ8WVF2 138 aa11.93□□□□□ -0.5
SUB1-213ENST00000515355 AZIN2Q96A70 460 aa11.93□□□□□ -0.5
SUB1-213ENST00000515355 PRICKLE1Q96MT3 831 aaPredicted RBP11.93□□□□□ -0.5
SUB1-213ENST00000515355 RPRD1AQ96P16 312 aaPredicted RBP11.93□□□□□ -0.5
SUB1-213ENST00000515355 TPSD1Q9BZJ3 242 aa11.93□□□□□ -0.5
SUB1-213ENST00000515355 EDEM3Q9BZQ6 932 aa11.93□□□□□ -0.5
SUB1-213ENST00000515355 POLMQ9NP87 494 aaPredicted RBP11.93□□□□□ -0.5
SUB1-213ENST00000515355 AIPL1Q9NZN9 384 aa11.93□□□□□ -0.5
SUB1-213ENST00000515355 CALCOCO1Q9P1Z2 691 aa11.93□□□□□ -0.5
SUB1-213ENST00000515355 MYO1AQ9UBC5 1043 aa11.93□□□□□ -0.5
SUB1-213ENST00000515355 GGA2Q9UJY4 613 aa11.93□□□□□ -0.5
SUB1-213ENST00000515355 STOML2Q9UJZ1 356 aa11.93□□□□□ -0.5
SUB1-213ENST00000515355 VANGL2Q9ULK5 521 aa11.93□□□□□ -0.5
SUB1-213ENST00000515355 MMP17Q9ULZ9 603 aa11.93□□□□□ -0.5
SUB1-213ENST00000515355 PCDHGA2Q9Y5H1 932 aa11.93□□□□□ -0.5
SUB1-213ENST00000515355 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.93□□□□□ -0.5
SUB1-213ENST00000515355 RAD54BQ9Y620 910 aa11.93□□□□□ -0.5
SUB1-213ENST00000515355 A0A0A0MRY4 1105 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 TCRBV21S2A2A0A5A6 115 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 AXIN1O15169 862 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 SRGAP2O75044 1071 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 ALDH1A2O94788 518 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 F9P00740 461 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 TPM1P09493 284 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 RRM1P23921 792 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 HLA-FP30511 346 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 RDXP35241 583 aaKnown RBP11.92□□□□□ -0.5
SUB1-213ENST00000515355 SCNN1AP37088 669 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 PBX1P40424 430 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 NBL1P41271 181 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 ZBED6P86452 979 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 PTP4A2Q12974 167 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 AUHQ13825 339 aaKnown RBP11.92□□□□□ -0.5
SUB1-213ENST00000515355 CRY1Q16526 586 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 TSR1Q2NL82 804 aaKnown RBP11.92□□□□□ -0.5
SUB1-213ENST00000515355 FIGNQ5HY92 759 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 RABGAP1LQ5R372 815 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 SH3PXD2AQ5TCZ1 1133 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 TRNP1Q6NT89 227 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 SCYL2Q6P3W7 929 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 VPS36Q86VN1 386 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 LONP2Q86WA8 852 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 PHF13Q86YI8 300 aaPredicted RBP11.92□□□□□ -0.5
SUB1-213ENST00000515355 MCOLN2Q8IZK6 566 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 WFDC5Q8TCV5 224 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 CYB5D2Q8WUJ1 264 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 HMGB4Q8WW32 186 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 MCEEQ96PE7 176 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 FAM126AQ9BYI3 521 aaPredicted RBP11.92□□□□□ -0.5
SUB1-213ENST00000515355 SLC2A11Q9BYW1 496 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 ADAM33Q9BZ11 813 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 TRIM5Q9C035 493 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 TTYH3Q9C0H2 523 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 TMPRSS4Q9NRS4 437 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 ELOVL2Q9NXB9 296 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 TMEM59LQ9UK28 342 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 RAB23Q9ULC3 237 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 CAPN11Q9UMQ6 739 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 PLA2G4CQ9UP65 541 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 PAXBP1Q9Y5B6 917 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 HS3ST4Q9Y661 456 aa11.92□□□□□ -0.5
SUB1-213ENST00000515355 VPS13AQ96RL7 3174 aa11.91□□□□□ -0.5
SUB1-213ENST00000515355 A0A1W2PQJ5 194 aa11.91□□□□□ -0.5
SUB1-213ENST00000515355 DDX3XO00571 662 aaKnown RBP eCLIP11.91□□□□□ -0.52e-16■■■□□ 16.5
SUB1-213ENST00000515355 SYNCRIPO60506 623 aaKnown RBP11.91□□□□□ -0.5
SUB1-213ENST00000515355 GFRA3O60609 400 aa11.91□□□□□ -0.5
SUB1-213ENST00000515355 ADAM23O75077 832 aa11.91□□□□□ -0.5
SUB1-213ENST00000515355 LMNAP02545 664 aaKnown RBP11.91□□□□□ -0.5
SUB1-213ENST00000515355 FTLP02792 175 aaPredicted RBP11.91□□□□□ -0.5
SUB1-213ENST00000515355 GYPCP04921 128 aa11.91□□□□□ -0.5
SUB1-213ENST00000515355 PLEKP08567 350 aaPredicted RBP11.91□□□□□ -0.5
SUB1-213ENST00000515355 PABPC1P11940 636 aaKnown RBP11.91□□□□□ -0.5
SUB1-213ENST00000515355 TDGF1P13385 188 aa11.91□□□□□ -0.5
SUB1-213ENST00000515355 HNRNPLP14866 589 aaKnown RBP eCLIP11.91□□□□□ -0.5
SUB1-213ENST00000515355 POLR2EP19388 210 aaKnown RBP11.91□□□□□ -0.5
SUB1-213ENST00000515355 GPD1P21695 349 aa11.91□□□□□ -0.5
SUB1-213ENST00000515355 CD70P32970 193 aa11.91□□□□□ -0.5
SUB1-213ENST00000515355 RFC1P35251 1148 aaPredicted RBP11.91□□□□□ -0.5
SUB1-213ENST00000515355 SIM2Q14190 667 aaPredicted RBP11.91□□□□□ -0.5
SUB1-213ENST00000515355 CCDC14Q49A88 953 aa11.91□□□□□ -0.5
SUB1-213ENST00000515355 FNDC3BQ53EP0 1204 aaKnown RBP11.91□□□□□ -0.5
SUB1-213ENST00000515355 RAB6CQ53S08 254 aa11.91□□□□□ -0.5
SUB1-213ENST00000515355 OTUD1Q5VV17 481 aaPredicted RBP11.91□□□□□ -0.5
SUB1-213ENST00000515355 FBXL22Q6P050 247 aa11.91□□□□□ -0.5
SUB1-213ENST00000515355 WDR59Q6PJI9 974 aa11.91□□□□□ -0.5
SUB1-213ENST00000515355 MON1BQ7L1V2 547 aa11.91□□□□□ -0.5
SUB1-213ENST00000515355 ASCL5Q7RTU5 278 aa11.91□□□□□ -0.5
SUB1-213ENST00000515355 C14orf80Q86SX3 495 aa11.91□□□□□ -0.5
SUB1-213ENST00000515355 CAMKK1Q8N5S9 505 aa11.91□□□□□ -0.5
SUB1-213ENST00000515355 C3orf20Q8ND61 904 aa11.91□□□□□ -0.5
SUB1-213ENST00000515355 FAM172AQ8WUF8 416 aa11.91□□□□□ -0.5
SUB1-213ENST00000515355 RAB6CQ9H0N0 254 aa11.91□□□□□ -0.5
SUB1-213ENST00000515355 ADAMTS1Q9UHI8 967 aa11.91□□□□□ -0.5
SUB1-213ENST00000515355 FBXO10Q9UK96 956 aa11.91□□□□□ -0.5
SUB1-213ENST00000515355 SLC27A6Q9Y2P4 619 aa11.91□□□□□ -0.5
SUB1-213ENST00000515355 STON1Q9Y6Q2 735 aa11.91□□□□□ -0.5
SUB1-213ENST00000515355 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.9□□□□□ -0.5
SUB1-213ENST00000515355 C2CD4BA6NLJ0 364 aa11.9□□□□□ -0.5
SUB1-213ENST00000515355 SIGLEC16A6NMB1 481 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms