RNA–Protein interactions for RNA: ENST00000514676.5

CDK7-211, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5 BASIC

Gene CDK7, Length 1,164 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-211ENST00000514676 LMAN2Q12907 356 aa13.54□□□□□ -0.24
CDK7-211ENST00000514676 NME3Q13232 169 aa13.54□□□□□ -0.24
CDK7-211ENST00000514676 ENPP2Q13822 863 aa13.54□□□□□ -0.24
CDK7-211ENST00000514676 PUM1Q14671 1186 aaKnown RBP eCLIP13.54□□□□□ -0.24
CDK7-211ENST00000514676 AASDHQ4L235 1098 aaPredicted RBP13.54□□□□□ -0.24
CDK7-211ENST00000514676 FSCBQ5H9T9 825 aa13.54□□□□□ -0.24
CDK7-211ENST00000514676 PLA2G2CQ5R387 149 aa13.54□□□□□ -0.24
CDK7-211ENST00000514676 KIAA0907Q7Z7F0 614 aaPredicted RBP13.54□□□□□ -0.24
CDK7-211ENST00000514676 CHSY1Q86X52 802 aa13.54□□□□□ -0.24
CDK7-211ENST00000514676 ERICH1Q86X53 443 aa13.54□□□□□ -0.24
CDK7-211ENST00000514676 CACUL1Q86Y37 369 aa13.54□□□□□ -0.24
CDK7-211ENST00000514676 ATP6V0D2Q8N8Y2 350 aa13.54□□□□□ -0.24
CDK7-211ENST00000514676 EPS8L1Q8TE68 723 aa13.54□□□□□ -0.24
CDK7-211ENST00000514676 CPA5Q8WXQ8 436 aa13.54□□□□□ -0.24
CDK7-211ENST00000514676 RNF34Q969K3 372 aa13.54□□□□□ -0.24
CDK7-211ENST00000514676 C18orf8Q96DM3 657 aa13.54□□□□□ -0.24
CDK7-211ENST00000514676 LMLNQ96KR4 655 aa13.54□□□□□ -0.24
CDK7-211ENST00000514676 SPACA7Q96KW9 195 aa13.54□□□□□ -0.24
CDK7-211ENST00000514676 DDX50Q9BQ39 737 aaKnown RBP13.54□□□□□ -0.24
CDK7-211ENST00000514676 ADAM33Q9BZ11 813 aa13.54□□□□□ -0.24
CDK7-211ENST00000514676 ASNSD1Q9NWL6 643 aa13.54□□□□□ -0.24
CDK7-211ENST00000514676 PCDHGA5Q9Y5G8 931 aa13.54□□□□□ -0.24
CDK7-211ENST00000514676 CFAP54Q96N23 3096 aa13.54□□□□□ -0.24
CDK7-211ENST00000514676 NUP205Q92621 2012 aa13.54□□□□□ -0.24
CDK7-211ENST00000514676 IGHV1OR15-9A0A0B4J2B8 117 aa13.53□□□□□ -0.24
CDK7-211ENST00000514676 DCDC2BA2VCK2 349 aa13.53□□□□□ -0.24
CDK7-211ENST00000514676 LGALS16A8MUM7 142 aa13.53□□□□□ -0.24
CDK7-211ENST00000514676 KCNU1A8MYU2 1149 aa13.53□□□□□ -0.24
CDK7-211ENST00000514676 GOLGA8SH3BPF8 625 aa13.53□□□□□ -0.24
CDK7-211ENST00000514676 M0QYT0 321 aa13.53□□□□□ -0.24
CDK7-211ENST00000514676 ZBTB24O43167 697 aaPredicted RBP13.53□□□□□ -0.24
CDK7-211ENST00000514676 SOX5P35711 763 aa13.53□□□□□ -0.24
CDK7-211ENST00000514676 GGCXP38435 758 aa13.53□□□□□ -0.24
CDK7-211ENST00000514676 JAM2P57087 298 aa13.53□□□□□ -0.24
CDK7-211ENST00000514676 STARD3Q14849 445 aa13.53□□□□□ -0.24
CDK7-211ENST00000514676 EIF4HQ15056 248 aaKnown RBP13.53□□□□□ -0.24
CDK7-211ENST00000514676 PTPRNQ16849 979 aa13.53□□□□□ -0.24
CDK7-211ENST00000514676 FNDC3BQ53EP0 1204 aaKnown RBP13.53□□□□□ -0.24
CDK7-211ENST00000514676 MPP7Q5T2T1 576 aa13.53□□□□□ -0.24
CDK7-211ENST00000514676 OTUD1Q5VV17 481 aaPredicted RBP13.53□□□□□ -0.24
CDK7-211ENST00000514676 NAA35Q5VZE5 725 aa13.53□□□□□ -0.24
CDK7-211ENST00000514676 RNF43Q68DV7 783 aa13.53□□□□□ -0.24
CDK7-211ENST00000514676 SMYD5Q6GMV2 418 aa13.53□□□□□ -0.24
CDK7-211ENST00000514676 SERPINA13PQ6UXR4 307 aa13.53□□□□□ -0.24
CDK7-211ENST00000514676 LPCAT2Q7L5N7 544 aa13.53□□□□□ -0.24
CDK7-211ENST00000514676 SLC26A9Q7LBE3 791 aa13.53□□□□□ -0.24
CDK7-211ENST00000514676 CYP2U1Q7Z449 544 aa13.53□□□□□ -0.24
CDK7-211ENST00000514676 PHLDB2Q86SQ0 1253 aa13.53□□□□□ -0.24
CDK7-211ENST00000514676 C11orf74Q86VG3 221 aa13.53□□□□□ -0.24
CDK7-211ENST00000514676 CIR1Q86X95 450 aaPredicted RBP13.53□□□□□ -0.24
CDK7-211ENST00000514676 XYLT1Q86Y38 959 aa13.53□□□□□ -0.24
CDK7-211ENST00000514676 AHI1Q8N157 1196 aa13.53□□□□□ -0.24
CDK7-211ENST00000514676 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.53□□□□□ -0.24
CDK7-211ENST00000514676 C12orf50Q8NA57 414 aaPredicted RBP13.53□□□□□ -0.24
CDK7-211ENST00000514676 ANKRD20A12PQ8NF67 263 aa13.53□□□□□ -0.24
CDK7-211ENST00000514676 NEK11Q8NG66 645 aa13.53□□□□□ -0.24
CDK7-211ENST00000514676 FIBINQ8TAL6 211 aa13.53□□□□□ -0.24
CDK7-211ENST00000514676 WFIKKN2Q8TEU8 576 aa13.53□□□□□ -0.24
CDK7-211ENST00000514676 PIGKQ92643 395 aa13.53□□□□□ -0.24
CDK7-211ENST00000514676 MKRN2Q9H000 416 aaKnown RBP13.53□□□□□ -0.24
CDK7-211ENST00000514676 MTG2Q9H4K7 406 aa13.53□□□□□ -0.24
CDK7-211ENST00000514676 PRDM16Q9HAZ2 1276 aa13.53□□□□□ -0.24
CDK7-211ENST00000514676 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.53□□□□□ -0.24
CDK7-211ENST00000514676 NOCTQ9UK39 431 aaKnown RBP13.53□□□□□ -0.24
CDK7-211ENST00000514676 CDV3Q9UKY7 258 aaKnown RBP13.53□□□□□ -0.24
CDK7-211ENST00000514676 INTS6Q9UL03 887 aaKnown RBP13.53□□□□□ -0.24
CDK7-211ENST00000514676 ATXN2Q99700 1313 aaKnown RBP13.53□□□□□ -0.24
CDK7-211ENST00000514676 CEP192Q8TEP8 1941 aa13.52□□□□□ -0.24
CDK7-211ENST00000514676 PLXND1Q9Y4D7 1925 aa13.52□□□□□ -0.24
CDK7-211ENST00000514676 SPTBN4Q9H254 2564 aa13.52□□□□□ -0.24
CDK7-211ENST00000514676 TIMM44O43615 452 aa13.52□□□□□ -0.25
CDK7-211ENST00000514676 SYNCRIPO60506 623 aaKnown RBP13.52□□□□□ -0.25
CDK7-211ENST00000514676 LUC7L3O95232 432 aaKnown RBP13.52□□□□□ -0.25
CDK7-211ENST00000514676 POLR2EP19388 210 aaKnown RBP13.52□□□□□ -0.25
CDK7-211ENST00000514676 NOS2P35228 1153 aa13.52□□□□□ -0.25
CDK7-211ENST00000514676 GABRB2P47870 512 aa13.52□□□□□ -0.25
CDK7-211ENST00000514676 SULT1E1P49888 294 aa13.52□□□□□ -0.25
CDK7-211ENST00000514676 IRAK1P51617 712 aa13.52□□□□□ -0.25
CDK7-211ENST00000514676 SNX16P57768 344 aa13.52□□□□□ -0.25
CDK7-211ENST00000514676 NOMO3P69849 1222 aa13.52□□□□□ -0.25
CDK7-211ENST00000514676 FMO1Q01740 532 aa13.52□□□□□ -0.25
CDK7-211ENST00000514676 RPL6Q02878 288 aaKnown RBP13.52□□□□□ -0.25
CDK7-211ENST00000514676 BYSLQ13895 437 aaKnown RBP13.52□□□□□ -0.25
CDK7-211ENST00000514676 FAM102AQ5T9C2 384 aaPredicted RBP13.52□□□□□ -0.25
CDK7-211ENST00000514676 DGLUCYQ7Z3D6 616 aa13.52□□□□□ -0.25
CDK7-211ENST00000514676 C14orf80Q86SX3 495 aa13.52□□□□□ -0.25
CDK7-211ENST00000514676 TMPRSS6Q8IU80 811 aa13.52□□□□□ -0.25
CDK7-211ENST00000514676 DHX40Q8IX18 779 aaKnown RBP13.52□□□□□ -0.25
CDK7-211ENST00000514676 ZNF397Q8NF99 534 aaPredicted RBP13.52□□□□□ -0.25
CDK7-211ENST00000514676 SLC30A5Q8TAD4 765 aa13.52□□□□□ -0.25
CDK7-211ENST00000514676 BTN2A3PQ96KV6 586 aa13.52□□□□□ -0.25
CDK7-211ENST00000514676 SPAG5Q96R06 1193 aa13.52□□□□□ -0.25
CDK7-211ENST00000514676 PCDHB18PQ96TA0 734 aa13.52□□□□□ -0.25
CDK7-211ENST00000514676 NPY6RQ99463 290 aa13.52□□□□□ -0.25
CDK7-211ENST00000514676 PRMT1Q99873 361 aaKnown RBP13.52□□□□□ -0.25
CDK7-211ENST00000514676 IRX2Q9BZI1 471 aaPredicted RBP13.52□□□□□ -0.25
CDK7-211ENST00000514676 ANLNQ9NQW6 1124 aa13.52□□□□□ -0.25
CDK7-211ENST00000514676 TMPRSS4Q9NRS4 437 aa13.52□□□□□ -0.25
CDK7-211ENST00000514676 VPS45Q9NRW7 570 aa13.52□□□□□ -0.25
CDK7-211ENST00000514676 TMEM74BQ9NUR3 256 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms