RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 MAPK9P45984 424 aa5.78□□□□□ -1.48
HMGCS1-207ENST00000514610 RBM5P52756 815 aaKnown RBP eCLIP5.78□□□□□ -1.48
HMGCS1-207ENST00000514610 SLC37A1P57057 533 aa5.78□□□□□ -1.48
HMGCS1-207ENST00000514610 HSP90AB4PQ58FF6 505 aa5.78□□□□□ -1.48
HMGCS1-207ENST00000514610 ZNF484Q5JVG2 852 aa5.78□□□□□ -1.48
HMGCS1-207ENST00000514610 TMEM63BQ5T3F8 832 aa5.78□□□□□ -1.48
HMGCS1-207ENST00000514610 ANKRD45Q5TZF3 282 aa5.78□□□□□ -1.48
HMGCS1-207ENST00000514610 STRIP1Q5VSL9 837 aa5.78□□□□□ -1.48
HMGCS1-207ENST00000514610 VSTM1Q6UX27 236 aa5.78□□□□□ -1.48
HMGCS1-207ENST00000514610 RANBP10Q6VN20 620 aa5.78□□□□□ -1.48
HMGCS1-207ENST00000514610 CEP70Q8NHQ1 597 aa5.78□□□□□ -1.48
HMGCS1-207ENST00000514610 KTI12Q96EK9 354 aaPredicted RBP5.78□□□□□ -1.48
HMGCS1-207ENST00000514610 ZNF845Q96IR2 970 aaPredicted RBP5.78□□□□□ -1.48
HMGCS1-207ENST00000514610 COG8Q96MW5 612 aa5.78□□□□□ -1.48
HMGCS1-207ENST00000514610 RMI1Q9H9A7 625 aa5.78□□□□□ -1.48
HMGCS1-207ENST00000514610 PLEKHA2Q9HB19 425 aa5.78□□□□□ -1.48
HMGCS1-207ENST00000514610 GGA3Q9NZ52 723 aa5.78□□□□□ -1.48
HMGCS1-207ENST00000514610 HEMK1Q9Y5R4 338 aaPredicted RBP5.78□□□□□ -1.48
HMGCS1-207ENST00000514610 COPG1Q9Y678 874 aaKnown RBP5.78□□□□□ -1.48
HMGCS1-207ENST00000514610 ARHGEF17Q96PE2 2063 aaPredicted RBP5.78□□□□□ -1.48
HMGCS1-207ENST00000514610 UBE2Q2LH0YL09 131 aa5.77□□□□□ -1.49
HMGCS1-207ENST00000514610 STX16-NPEPL1H3BU86 382 aa5.77□□□□□ -1.49
HMGCS1-207ENST00000514610 STX16O14662 325 aa5.77□□□□□ -1.49
HMGCS1-207ENST00000514610 ALDOAP04075 364 aaKnown RBP5.77□□□□□ -1.49
HMGCS1-207ENST00000514610 CSF1P09603 554 aa5.77□□□□□ -1.49
HMGCS1-207ENST00000514610 CYP2A6P11509 494 aaPredicted RBP5.77□□□□□ -1.49
HMGCS1-207ENST00000514610 SHC2P98077 582 aa5.77□□□□□ -1.49
HMGCS1-207ENST00000514610 DMWDQ09019 674 aa5.77□□□□□ -1.49
HMGCS1-207ENST00000514610 EFR3AQ14156 821 aa5.77□□□□□ -1.49
HMGCS1-207ENST00000514610 CC2D1BQ5T0F9 858 aaKnown RBP5.77□□□□□ -1.49
HMGCS1-207ENST00000514610 SLC39A5Q6ZMH5 540 aa5.77□□□□□ -1.49
HMGCS1-207ENST00000514610 ZNF788Q6ZQV5 615 aa5.77□□□□□ -1.49
HMGCS1-207ENST00000514610 LRRTM4Q86VH4 590 aa5.77□□□□□ -1.49
HMGCS1-207ENST00000514610 RFX6Q8HWS3 928 aa5.77□□□□□ -1.49
HMGCS1-207ENST00000514610 ADGRF3Q8IZF5 1079 aa5.77□□□□□ -1.49
HMGCS1-207ENST00000514610 EXD3Q8N9H8 876 aa5.77□□□□□ -1.49
HMGCS1-207ENST00000514610 HERVK_113Q902F9 699 aa5.77□□□□□ -1.49
HMGCS1-207ENST00000514610 ASB2Q96Q27 587 aa5.77□□□□□ -1.49
HMGCS1-207ENST00000514610 MLXIPLQ9NP71 852 aa5.77□□□□□ -1.49
HMGCS1-207ENST00000514610 RIC8AQ9NPQ8 531 aa5.77□□□□□ -1.49
HMGCS1-207ENST00000514610 C9orf78Q9NZ63 289 aaPredicted RBP5.77□□□□□ -1.49
HMGCS1-207ENST00000514610 LRRFIP2Q9Y608 721 aaKnown RBP5.77□□□□□ -1.49
HMGCS1-207ENST00000514610 SIRT4Q9Y6E7 314 aaPredicted RBP5.77□□□□□ -1.49
HMGCS1-207ENST00000514610 WIPF3A6NGB9 483 aa5.76□□□□□ -1.49
HMGCS1-207ENST00000514610 MANSC4A6NHS7 340 aaPredicted RBP5.76□□□□□ -1.49
HMGCS1-207ENST00000514610 RRN3P2A6NIE6 340 aa5.76□□□□□ -1.49
HMGCS1-207ENST00000514610 C3orf70A6NLC5 250 aaPredicted RBP5.76□□□□□ -1.49
HMGCS1-207ENST00000514610 TTC34A8MYJ7 566 aa5.76□□□□□ -1.49
HMGCS1-207ENST00000514610 PRRT4C9JH25 899 aa5.76□□□□□ -1.49
HMGCS1-207ENST00000514610 GRM8O00222 908 aa5.76□□□□□ -1.49
HMGCS1-207ENST00000514610 NPHP1O15259 732 aa5.76□□□□□ -1.49
HMGCS1-207ENST00000514610 PYGLP06737 847 aa5.76□□□□□ -1.49
HMGCS1-207ENST00000514610 SLC3A2P08195 630 aaKnown RBP5.76□□□□□ -1.49
HMGCS1-207ENST00000514610 RFPL3SP0C7P2 107 aa5.76□□□□□ -1.49
HMGCS1-207ENST00000514610 ACP5P13686 325 aa5.76□□□□□ -1.49
HMGCS1-207ENST00000514610 CNTFP26441 200 aa5.76□□□□□ -1.49
HMGCS1-207ENST00000514610 PAPOLAP51003 745 aaKnown RBP5.76□□□□□ -1.49
HMGCS1-207ENST00000514610 ELLP55199 621 aaPredicted RBP5.76□□□□□ -1.49
HMGCS1-207ENST00000514610 TAF12Q16514 161 aa5.76□□□□□ -1.49
HMGCS1-207ENST00000514610 LVRNQ6Q4G3 990 aa5.76□□□□□ -1.49
HMGCS1-207ENST00000514610 ZNF782Q6ZMW2 699 aaPredicted RBP5.76□□□□□ -1.49
HMGCS1-207ENST00000514610 RINLQ6ZS11 566 aa5.76□□□□□ -1.49
HMGCS1-207ENST00000514610 ADGRG3Q86Y34 549 aa5.76□□□□□ -1.49
HMGCS1-207ENST00000514610 TMEM57Q8N5G2 664 aa5.76□□□□□ -1.49
HMGCS1-207ENST00000514610 LINS1Q8NG48 757 aa5.76□□□□□ -1.49
HMGCS1-207ENST00000514610 ZNF398Q8TD17 642 aa5.76□□□□□ -1.49
HMGCS1-207ENST00000514610 CELF1Q92879 486 aaKnown RBP5.76□□□□□ -1.49
HMGCS1-207ENST00000514610 ARRDC3Q96B67 414 aa5.76□□□□□ -1.49
HMGCS1-207ENST00000514610 TWNKQ96RR1 684 aa5.76□□□□□ -1.49
HMGCS1-207ENST00000514610 PIGSQ96S52 555 aa5.76□□□□□ -1.49
HMGCS1-207ENST00000514610 NPAS1Q99742 590 aa5.76□□□□□ -1.49
HMGCS1-207ENST00000514610 NUAK2Q9H093 628 aa5.76□□□□□ -1.49
HMGCS1-207ENST00000514610 RASSF1Q9NS23 344 aa5.76□□□□□ -1.49
HMGCS1-207ENST00000514610 GTF2A1LQ9UNN4 478 aa5.76□□□□□ -1.49
HMGCS1-207ENST00000514610 DNAJC16Q9Y2G8 782 aa5.76□□□□□ -1.49
HMGCS1-207ENST00000514610 DERAQ9Y315 318 aa5.76□□□□□ -1.49
HMGCS1-207ENST00000514610 SPATA31A6Q5VVP1 1343 aa5.75□□□□□ -1.49
HMGCS1-207ENST00000514610 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.75□□□□□ -1.49
HMGCS1-207ENST00000514610 LINC01548A6NM66 108 aa5.75□□□□□ -1.49
HMGCS1-207ENST00000514610 TMEM232C9JQI7 657 aa5.75□□□□□ -1.49
HMGCS1-207ENST00000514610 POLBP06746 335 aa5.75□□□□□ -1.49
HMGCS1-207ENST00000514610 CNPP09543 421 aaKnown RBP5.75□□□□□ -1.49
HMGCS1-207ENST00000514610 LYL1P12980 280 aa5.75□□□□□ -1.49
HMGCS1-207ENST00000514610 CHN1P15882 459 aa5.75□□□□□ -1.49
HMGCS1-207ENST00000514610 PAX3P23760 479 aa5.75□□□□□ -1.49
HMGCS1-207ENST00000514610 HMGA2P52926 109 aa5.75□□□□□ -1.49
HMGCS1-207ENST00000514610 TUBA4AP68366 448 aa5.75□□□□□ -1.49
HMGCS1-207ENST00000514610 B4GALNT1Q00973 533 aa5.75□□□□□ -1.49
HMGCS1-207ENST00000514610 ZNF66Q6ZN08 573 aa5.75□□□□□ -1.49
HMGCS1-207ENST00000514610 RD3Q7Z3Z2 195 aa5.75□□□□□ -1.49
HMGCS1-207ENST00000514610 PRIMA1Q86XR5 153 aa5.75□□□□□ -1.49
HMGCS1-207ENST00000514610 PTGR2Q8N8N7 351 aaPredicted RBP5.75□□□□□ -1.49
HMGCS1-207ENST00000514610 SRFBP1Q8NEF9 429 aaKnown RBP5.75□□□□□ -1.49
HMGCS1-207ENST00000514610 DPF1Q92782 380 aa5.75□□□□□ -1.49
HMGCS1-207ENST00000514610 P2RY11Q96G91 374 aa5.75□□□□□ -1.49
HMGCS1-207ENST00000514610 SENP7Q9BQF6 1050 aa5.75□□□□□ -1.49
HMGCS1-207ENST00000514610 EFHD1Q9BUP0 239 aa5.75□□□□□ -1.49
HMGCS1-207ENST00000514610 TM2D2Q9BX73 214 aa5.75□□□□□ -1.49
HMGCS1-207ENST00000514610 PRDM16Q9HAZ2 1276 aa5.75□□□□□ -1.49
HMGCS1-207ENST00000514610 PDE11AQ9HCR9 933 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms