RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 HTRA4P83105 476 aaPredicted RBP7.65□□□□□ -1.19
CLIP1-205ENST00000514271 SPARCL1Q14515 664 aa7.65□□□□□ -1.19
CLIP1-205ENST00000514271 COL19A1Q14993 1142 aa7.65□□□□□ -1.19
CLIP1-205ENST00000514271 EFTUD2Q15029 972 aaKnown RBP eCLIP7.65□□□□□ -1.19
CLIP1-205ENST00000514271 TBCCQ15814 346 aa7.65□□□□□ -1.19
CLIP1-205ENST00000514271 AGMOQ6ZNB7 445 aa7.65□□□□□ -1.19
CLIP1-205ENST00000514271 INTS8Q75QN2 995 aaKnown RBP7.65□□□□□ -1.19
CLIP1-205ENST00000514271 TMC7Q7Z402 723 aa7.65□□□□□ -1.19
CLIP1-205ENST00000514271 POLNQ7Z5Q5 900 aa7.65□□□□□ -1.19
CLIP1-205ENST00000514271 KRT77Q7Z794 578 aa7.65□□□□□ -1.19
CLIP1-205ENST00000514271 VSIG1Q86XK7 387 aa7.65□□□□□ -1.19
CLIP1-205ENST00000514271 TMPRSS6Q8IU80 811 aa7.65□□□□□ -1.19
CLIP1-205ENST00000514271 CHERPQ8IWX8 916 aaKnown RBP7.65□□□□□ -1.19
CLIP1-205ENST00000514271 FAM178BQ8IXR5 827 aa7.65□□□□□ -1.19
CLIP1-205ENST00000514271 MYO1HQ8N1T3 1032 aa7.65□□□□□ -1.19
CLIP1-205ENST00000514271 URGCPQ8TCY9 931 aa7.65□□□□□ -1.19
CLIP1-205ENST00000514271 FBF1Q8TES7 1133 aa7.65□□□□□ -1.19
CLIP1-205ENST00000514271 CNDP1Q96KN2 507 aa7.65□□□□□ -1.19
CLIP1-205ENST00000514271 UROC1Q96N76 676 aa7.65□□□□□ -1.19
CLIP1-205ENST00000514271 SIKE1Q9BRV8 207 aa7.65□□□□□ -1.19
CLIP1-205ENST00000514271 OSBPL8Q9BZF1 889 aa7.65□□□□□ -1.19
CLIP1-205ENST00000514271 PPP1R12CQ9BZL4 782 aa7.65□□□□□ -1.19
CLIP1-205ENST00000514271 NMUR2Q9GZQ4 415 aa7.65□□□□□ -1.19
CLIP1-205ENST00000514271 TRABDQ9H4I3 376 aa7.65□□□□□ -1.19
CLIP1-205ENST00000514271 PLEKHA5Q9HAU0 1116 aa7.65□□□□□ -1.19
CLIP1-205ENST00000514271 PCDH9Q9HC56 1237 aa7.65□□□□□ -1.19
CLIP1-205ENST00000514271 PREBQ9HCU5 417 aa7.65□□□□□ -1.19
CLIP1-205ENST00000514271 CUEDC1Q9NWM3 386 aaPredicted RBP7.65□□□□□ -1.19
CLIP1-205ENST00000514271 PADI3Q9ULW8 664 aa7.65□□□□□ -1.19
CLIP1-205ENST00000514271 PTPRJQ12913 1337 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 K7ERI5 159 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 RNASEH2AO75792 299 aaKnown RBP7.64□□□□□ -1.19
CLIP1-205ENST00000514271 ACSL3O95573 720 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 GAS8O95995 478 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 C4BPAP04003 597 aaKnown RBP7.64□□□□□ -1.19
CLIP1-205ENST00000514271 FOSL1P15407 271 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 ARL4CP56559 192 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 UBE3AQ05086 875 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 FRG1Q14331 258 aaKnown RBP7.64□□□□□ -1.19
CLIP1-205ENST00000514271 HIC1Q14526 733 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 TLR1Q15399 786 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 USP37Q86T82 979 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 RNF149Q8NC42 400 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 GDAP1Q8TB36 358 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 GRK7Q8WTQ7 553 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 ALKBH8Q96BT7 664 aaKnown RBP7.64□□□□□ -1.19
CLIP1-205ENST00000514271 APOPT1Q96IL0 206 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 PCMTD1Q96MG8 357 aaPredicted RBP7.64□□□□□ -1.19
CLIP1-205ENST00000514271 PSMC3IPQ9P2W1 217 aaPredicted RBP7.64□□□□□ -1.19
CLIP1-205ENST00000514271 LRFN2Q9ULH4 789 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 LZTS1Q9Y250 596 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 INSL6Q9Y581 213 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 PCNTO95613 3336 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 A0A0U1RQF3 1178 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 TMEM63AO94886 807 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 WEE2P0C1S8 567 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 TRIM49P0CI25 452 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 TRIM49CP0CI26 452 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 TXNL4AP83876 142 aaKnown RBP7.64□□□□□ -1.19
CLIP1-205ENST00000514271 DEUP1Q05D60 604 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 NSUN2Q08J23 767 aaKnown RBP eCLIP7.64□□□□□ -1.19
CLIP1-205ENST00000514271 ANKRD22Q5VYY1 191 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 RIPOR1Q6ZS17 1223 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 AHI1Q8N157 1196 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 NUP93Q8N1F7 819 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 PPM1KQ8N3J5 372 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 TANKQ92844 425 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 FAM81BQ96LP2 452 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 RAD9AQ99638 391 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 OXCT2Q9BYC2 517 aaPredicted RBP7.64□□□□□ -1.19
CLIP1-205ENST00000514271 SMYD2Q9NRG4 433 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 TOPORSQ9NS56 1045 aaPredicted RBP7.64□□□□□ -1.19
CLIP1-205ENST00000514271 ST3GAL5Q9UNP4 418 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 PCDHB7Q9Y5E2 793 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 A0A087WZ62 844 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 LRRIQ4A6NIV6 560 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 C9IYK1 514 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 TOM1L1O75674 476 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 SERPINA6P08185 405 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 PPM1AP35813 382 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 NPTX2P47972 431 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 AP3M2P53677 418 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 MTTPP55157 894 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 WDR5P61964 334 aaKnown RBP7.64□□□□□ -1.19
CLIP1-205ENST00000514271 ZNF200P98182 395 aaPredicted RBP7.64□□□□□ -1.19
CLIP1-205ENST00000514271 ARID5AQ03989 594 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 MAPRE1Q15691 268 aaKnown RBP7.64□□□□□ -1.19
CLIP1-205ENST00000514271 MBLAC2Q68D91 279 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 SCARA3Q6AZY7 606 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 ALKBH2Q6NS38 261 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 SPATA18Q8TC71 538 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 LRRC8CQ8TDW0 803 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 TRAPPC12Q8WVT3 735 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 KBTBD7Q8WVZ9 684 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 C1orf54Q8WWF1 131 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 FAF2Q96CS3 445 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 CCT7Q99832 543 aa7.64□□□□□ -1.19
CLIP1-205ENST00000514271 FDXACB1Q9BRP7 624 aaPredicted RBP7.64□□□□□ -1.19
CLIP1-205ENST00000514271 C11orf84Q9BUA3 381 aaPredicted RBP7.64□□□□□ -1.19
CLIP1-205ENST00000514271 FAM124BQ9H5Z6 455 aaPredicted RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms