RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 DEFB109BQ30KR1 87 aa8□□□□□ -1.13
CLDND1-229ENST00000513988 PERM1Q5SV97 790 aa8□□□□□ -1.13
CLDND1-229ENST00000513988 HECTD3Q5T447 861 aa8□□□□□ -1.13
CLDND1-229ENST00000513988 TDRD10Q5VZ19 366 aaKnown RBP8□□□□□ -1.13
CLDND1-229ENST00000513988 C4orf50Q6ZRC1 276 aa8□□□□□ -1.13
CLDND1-229ENST00000513988 HTR3DQ70Z44 454 aa8□□□□□ -1.13
CLDND1-229ENST00000513988 CXXC5Q7LFL8 322 aaKnown RBP8□□□□□ -1.13
CLDND1-229ENST00000513988 CCDC13Q8IYE1 715 aa8□□□□□ -1.13
CLDND1-229ENST00000513988 SLFN12Q8IYM2 578 aa8□□□□□ -1.13
CLDND1-229ENST00000513988 GPBAR1Q8TDU6 330 aa8□□□□□ -1.13
CLDND1-229ENST00000513988 KIFAP3Q92845 792 aa8□□□□□ -1.13
CLDND1-229ENST00000513988 USP7Q93009 1102 aa8□□□□□ -1.13
CLDND1-229ENST00000513988 PKMYT1Q99640 499 aa8□□□□□ -1.13
CLDND1-229ENST00000513988 CCSER1Q9C0I3 900 aa8□□□□□ -1.13
CLDND1-229ENST00000513988 NACA2Q9H009 215 aa8□□□□□ -1.13
CLDND1-229ENST00000513988 PABPC3Q9H361 631 aaKnown RBP8□□□□□ -1.13
CLDND1-229ENST00000513988 SEMA6CQ9H3T2 930 aa8□□□□□ -1.13
CLDND1-229ENST00000513988 KLHL11Q9NVR0 708 aa8□□□□□ -1.13
CLDND1-229ENST00000513988 MAP10Q9P2G4 905 aa8□□□□□ -1.13
CLDND1-229ENST00000513988 SERGEFQ9UGK8 458 aa8□□□□□ -1.13
CLDND1-229ENST00000513988 LSM7Q9UK45 103 aaKnown RBP8□□□□□ -1.13
CLDND1-229ENST00000513988 BRPF3Q9ULD4 1205 aa8□□□□□ -1.13
CLDND1-229ENST00000513988 NAP1L2Q9ULW6 460 aaPredicted RBP8□□□□□ -1.13
CLDND1-229ENST00000513988 SCML1Q9UN30 329 aa8□□□□□ -1.13
CLDND1-229ENST00000513988 PCDHA4Q9UN74 947 aa8□□□□□ -1.13
CLDND1-229ENST00000513988 LOXL2Q9Y4K0 774 aa8□□□□□ -1.13
CLDND1-229ENST00000513988 KPNA7A9QM74 516 aa7.99□□□□□ -1.13
CLDND1-229ENST00000513988 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.99□□□□□ -1.13
CLDND1-229ENST00000513988 MUSKO15146 869 aa7.99□□□□□ -1.13
CLDND1-229ENST00000513988 CASC3O15234 703 aaKnown RBP7.99□□□□□ -1.13
CLDND1-229ENST00000513988 NKX2-8O15522 239 aa7.99□□□□□ -1.13
CLDND1-229ENST00000513988 CLDN3O15551 220 aa7.99□□□□□ -1.13
CLDND1-229ENST00000513988 PRPF3O43395 683 aaKnown RBP7.99□□□□□ -1.13
CLDND1-229ENST00000513988 TIMM44O43615 452 aa7.99□□□□□ -1.13
CLDND1-229ENST00000513988 CCNT1O60563 726 aaKnown RBP7.99□□□□□ -1.13
CLDND1-229ENST00000513988 JAK2O60674 1132 aa7.99□□□□□ -1.13
CLDND1-229ENST00000513988 RNASEH2AO75792 299 aaKnown RBP7.99□□□□□ -1.13
CLDND1-229ENST00000513988 PTGER4P35408 488 aa7.99□□□□□ -1.13
CLDND1-229ENST00000513988 ADD1P35611 737 aaKnown RBP7.99□□□□□ -1.13
CLDND1-229ENST00000513988 RPIAP49247 311 aa7.99□□□□□ -1.13
CLDND1-229ENST00000513988 MAPK10P53779 464 aa7.99□□□□□ -1.13
CLDND1-229ENST00000513988 NOP14P78316 857 aaKnown RBP7.99□□□□□ -1.13
CLDND1-229ENST00000513988 KCNMA1Q12791 1236 aa7.99□□□□□ -1.13
CLDND1-229ENST00000513988 CDC20Q12834 499 aa7.99□□□□□ -1.13
CLDND1-229ENST00000513988 IFRD2Q12894 506 aaPredicted RBP7.99□□□□□ -1.13
CLDND1-229ENST00000513988 DRAP1Q14919 205 aaPredicted RBP7.99□□□□□ -1.13
CLDND1-229ENST00000513988 NR0B2Q15466 257 aa7.99□□□□□ -1.13
CLDND1-229ENST00000513988 SV2CQ496J9 727 aa7.99□□□□□ -1.13
CLDND1-229ENST00000513988 MSS51Q4VC12 460 aa7.99□□□□□ -1.13
CLDND1-229ENST00000513988 CROCCQ5TZA2 2017 aa7.99□□□□□ -1.13
CLDND1-229ENST00000513988 CEP135Q66GS9 1140 aa7.99□□□□□ -1.13
CLDND1-229ENST00000513988 JADE1Q6IE81 842 aa7.99□□□□□ -1.13
CLDND1-229ENST00000513988 VSTM1Q6UX27 236 aa7.99□□□□□ -1.13
CLDND1-229ENST00000513988 TAS1R3Q7RTX0 852 aa7.99□□□□□ -1.13
CLDND1-229ENST00000513988 PRPF39Q86UA1 669 aaKnown RBP7.99□□□□□ -1.13
CLDND1-229ENST00000513988 CDH24Q86UP0 819 aa7.99□□□□□ -1.13
CLDND1-229ENST00000513988 GLIS1Q8NBF1 620 aa7.99□□□□□ -1.13
CLDND1-229ENST00000513988 PDZD8Q8NEN9 1154 aa7.99□□□□□ -1.13
CLDND1-229ENST00000513988 NAT6Q93015 286 aa7.99□□□□□ -1.13
CLDND1-229ENST00000513988 NKD1Q969G9 470 aa7.99□□□□□ -1.13
CLDND1-229ENST00000513988 KLHDC7BQ96G42 594 aa7.99□□□□□ -1.13
CLDND1-229ENST00000513988 OMDQ99983 421 aa7.99□□□□□ -1.13
CLDND1-229ENST00000513988 FOXP3Q9BZS1 431 aa7.99□□□□□ -1.13
CLDND1-229ENST00000513988 NEUROG2Q9H2A3 272 aa7.99□□□□□ -1.13
CLDND1-229ENST00000513988 PRSS16Q9NQE7 514 aa7.99□□□□□ -1.13
CLDND1-229ENST00000513988 ORC3Q9UBD5 711 aaPredicted RBP7.99□□□□□ -1.13
CLDND1-229ENST00000513988 MAGEC2Q9UBF1 373 aaPredicted RBP7.99□□□□□ -1.13
CLDND1-229ENST00000513988 CCDC196A0A1B0GTZ2 297 aa7.98□□□□□ -1.13
CLDND1-229ENST00000513988 A0A1W2PP55 124 aa7.98□□□□□ -1.13
CLDND1-229ENST00000513988 SLC12A8A0AV02 714 aa7.98□□□□□ -1.13
CLDND1-229ENST00000513988 C9orf172C9J069 976 aa7.98□□□□□ -1.13
CLDND1-229ENST00000513988 AGRPO00253 132 aa7.98□□□□□ -1.13
CLDND1-229ENST00000513988 CAPN5O15484 640 aaPredicted RBP7.98□□□□□ -1.13
CLDND1-229ENST00000513988 LATO43561 262 aa7.98□□□□□ -1.13
CLDND1-229ENST00000513988 BDNFP23560 247 aa7.98□□□□□ -1.13
CLDND1-229ENST00000513988 GUCY2CP25092 1073 aa7.98□□□□□ -1.13
CLDND1-229ENST00000513988 ETV5P41161 510 aa7.98□□□□□ -1.13
CLDND1-229ENST00000513988 NPTX2P47972 431 aa7.98□□□□□ -1.13
CLDND1-229ENST00000513988 COPB1P53618 953 aaKnown RBP7.98□□□□□ -1.13
CLDND1-229ENST00000513988 PEX3P56589 373 aa7.98□□□□□ -1.13
CLDND1-229ENST00000513988 MCL1Q07820 350 aa7.98□□□□□ -1.13
CLDND1-229ENST00000513988 TMEM132DQ14C87 1099 aa7.98□□□□□ -1.13
CLDND1-229ENST00000513988 INPP5JQ15735 1006 aaPredicted RBP7.98□□□□□ -1.13
CLDND1-229ENST00000513988 ZRANB3Q5FWF4 1079 aa7.98□□□□□ -1.13
CLDND1-229ENST00000513988 TMEM164Q5U3C3 297 aa7.98□□□□□ -1.13
CLDND1-229ENST00000513988 XYLT1Q86Y38 959 aa7.98□□□□□ -1.13
CLDND1-229ENST00000513988 BLIDQ8IZY5 108 aa7.98□□□□□ -1.13
CLDND1-229ENST00000513988 PDCL2Q8N4E4 241 aa7.98□□□□□ -1.13
CLDND1-229ENST00000513988 PIWIL1Q96J94 861 aaKnown RBP7.98□□□□□ -1.13
CLDND1-229ENST00000513988 TMEM74Q96NL1 305 aa7.98□□□□□ -1.13
CLDND1-229ENST00000513988 CCDC3Q9BQI4 270 aa7.98□□□□□ -1.13
CLDND1-229ENST00000513988 CCSER2Q9H7U1 834 aa7.98□□□□□ -1.13
CLDND1-229ENST00000513988 CBX8Q9HC52 389 aa7.98□□□□□ -1.13
CLDND1-229ENST00000513988 GGT7Q9UJ14 662 aa7.98□□□□□ -1.13
CLDND1-229ENST00000513988 KCND3Q9UK17 655 aa7.98□□□□□ -1.13
CLDND1-229ENST00000513988 FZD4Q9ULV1 537 aa7.98□□□□□ -1.13
CLDND1-229ENST00000513988 PCDHA12Q9UN75 941 aa7.98□□□□□ -1.13
CLDND1-229ENST00000513988 PLA2G4CQ9UP65 541 aa7.98□□□□□ -1.13
CLDND1-229ENST00000513988 TBC1D3DA0A087WVF3 549 aa7.97□□□□□ -1.13
CLDND1-229ENST00000513988 TBC1D3IA0A087WXS9 549 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms