RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 NEU3Q9UQ49 428 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 SNX10Q9Y5X0 201 aa15.4■□□□□ 0.06
VCAN-211ENST00000513984 MTMR11A4FU01 709 aa15.39■□□□□ 0.05
VCAN-211ENST00000513984 POC1B-GALNT4F8VUJ3 575 aa15.39■□□□□ 0.05
VCAN-211ENST00000513984 H7C4K7 107 aa15.39■□□□□ 0.05
VCAN-211ENST00000513984 EPHB2P29323 1055 aa15.39■□□□□ 0.05
VCAN-211ENST00000513984 HOXC13P31276 330 aa15.39■□□□□ 0.05
VCAN-211ENST00000513984 CCR1P32246 355 aa15.39■□□□□ 0.05
VCAN-211ENST00000513984 GEMIN4P57678 1058 aaKnown RBP15.39■□□□□ 0.05
VCAN-211ENST00000513984 CDK16Q00536 496 aa15.39■□□□□ 0.05
VCAN-211ENST00000513984 PPIDQ08752 370 aaKnown RBP15.39■□□□□ 0.05
VCAN-211ENST00000513984 GALNT2Q10471 571 aa15.39■□□□□ 0.05
VCAN-211ENST00000513984 WASHC5Q12768 1159 aa15.39■□□□□ 0.05
VCAN-211ENST00000513984 MTM1Q13496 603 aa15.39■□□□□ 0.05
VCAN-211ENST00000513984 RTP2Q5QGT7 225 aa15.39■□□□□ 0.05
VCAN-211ENST00000513984 SDHAF4Q5VUM1 108 aa15.39■□□□□ 0.05
VCAN-211ENST00000513984 TMEM173Q86WV6 379 aaPredicted RBP15.39■□□□□ 0.05
VCAN-211ENST00000513984 TP53INP2Q8IXH6 220 aa15.39■□□□□ 0.05
VCAN-211ENST00000513984 TTC9BQ8N6N2 239 aa15.39■□□□□ 0.05
VCAN-211ENST00000513984 ATAD1Q8NBU5 361 aa15.39■□□□□ 0.05
VCAN-211ENST00000513984 NETO2Q8NC67 525 aa15.39■□□□□ 0.05
VCAN-211ENST00000513984 CCNYQ8ND76 341 aa15.39■□□□□ 0.05
VCAN-211ENST00000513984 FBF1Q8TES7 1133 aa15.39■□□□□ 0.05
VCAN-211ENST00000513984 HDAC11Q96DB2 347 aa15.39■□□□□ 0.05
VCAN-211ENST00000513984 SERPINB11Q96P15 392 aa15.39■□□□□ 0.05
VCAN-211ENST00000513984 DHRS4Q9BTZ2 278 aa15.39■□□□□ 0.05
VCAN-211ENST00000513984 XAB2Q9HCS7 855 aaKnown RBP15.39■□□□□ 0.05
VCAN-211ENST00000513984 EIF2B3Q9NR50 452 aaKnown RBP15.39■□□□□ 0.05
VCAN-211ENST00000513984 OSER1Q9NX31 292 aa15.39■□□□□ 0.05
VCAN-211ENST00000513984 PSMC3IPQ9P2W1 217 aaPredicted RBP15.39■□□□□ 0.05
VCAN-211ENST00000513984 SFMBT1Q9UHJ3 866 aa15.39■□□□□ 0.05
VCAN-211ENST00000513984 NR2E3Q9Y5X4 410 aa15.39■□□□□ 0.05
VCAN-211ENST00000513984 NYNRINQ9P2P1 1898 aaKnown RBP15.39■□□□□ 0.05
VCAN-211ENST00000513984 AVILO75366 819 aa15.38■□□□□ 0.05
VCAN-211ENST00000513984 EFEMP2O95967 443 aa15.38■□□□□ 0.05
VCAN-211ENST00000513984 CPB1P15086 417 aa15.38■□□□□ 0.05
VCAN-211ENST00000513984 CREB1P16220 341 aa15.38■□□□□ 0.05
VCAN-211ENST00000513984 MX2P20592 715 aa15.38■□□□□ 0.05
VCAN-211ENST00000513984 PPARDQ03181 441 aa15.38■□□□□ 0.05
VCAN-211ENST00000513984 MANEALQ5VSG8 457 aa15.38■□□□□ 0.05
VCAN-211ENST00000513984 RSPO2Q6UXX9 243 aaPredicted RBP15.38■□□□□ 0.05
VCAN-211ENST00000513984 DENND5BQ6ZUT9 1274 aa15.38■□□□□ 0.05
VCAN-211ENST00000513984 ANKS3Q6ZW76 656 aa15.38■□□□□ 0.05
VCAN-211ENST00000513984 DEFB128Q7Z7B8 93 aa15.38■□□□□ 0.05
VCAN-211ENST00000513984 TRABD2AQ86V40 505 aa15.38■□□□□ 0.05
VCAN-211ENST00000513984 NLRP14Q86W24 1093 aa15.38■□□□□ 0.05
VCAN-211ENST00000513984 COLGALT1Q8NBJ5 622 aa15.38■□□□□ 0.05
VCAN-211ENST00000513984 STKLD1Q8NE28 680 aa15.38■□□□□ 0.05
VCAN-211ENST00000513984 C2orf15Q8WU43 125 aaKnown RBP15.38■□□□□ 0.05
VCAN-211ENST00000513984 BCL7CQ8WUZ0 217 aaPredicted RBP15.38■□□□□ 0.05
VCAN-211ENST00000513984 TTPALQ9BTX7 342 aa15.38■□□□□ 0.05
VCAN-211ENST00000513984 CCDC134Q9H6E4 229 aa15.38■□□□□ 0.05
VCAN-211ENST00000513984 PPANQ9NQ55 473 aaKnown RBP15.38■□□□□ 0.05
VCAN-211ENST00000513984 INTS9Q9NV88 658 aaKnown RBP15.38■□□□□ 0.05
VCAN-211ENST00000513984 IGSF9Q9P2J2 1179 aa15.38■□□□□ 0.05
VCAN-211ENST00000513984 TBX21Q9UL17 535 aa15.38■□□□□ 0.05
VCAN-211ENST00000513984 TMEM120BA0PK00 339 aa15.38■□□□□ 0.05
VCAN-211ENST00000513984 GMNCA6NCL1 334 aa15.38■□□□□ 0.05
VCAN-211ENST00000513984 NT5C1B-RDH14C9J2C7 533 aa15.38■□□□□ 0.05
VCAN-211ENST00000513984 MSI1O43347 362 aaKnown RBP15.38■□□□□ 0.05
VCAN-211ENST00000513984 RTN3O95197 1032 aaPredicted RBP15.38■□□□□ 0.05
VCAN-211ENST00000513984 VNN2O95498 520 aa15.38■□□□□ 0.05
VCAN-211ENST00000513984 FAM107AO95990 144 aa15.38■□□□□ 0.05
VCAN-211ENST00000513984 PBX3P40426 434 aa15.38■□□□□ 0.05
VCAN-211ENST00000513984 SEC24CP53992 1094 aa15.38■□□□□ 0.05
VCAN-211ENST00000513984 HNRNPH2P55795 449 aaKnown RBP15.38■□□□□ 0.05
VCAN-211ENST00000513984 USP46P62068 366 aa15.38■□□□□ 0.05
VCAN-211ENST00000513984 CNKSR3Q6P9H4 555 aa15.38■□□□□ 0.05
VCAN-211ENST00000513984 SRRM1Q8IYB3 904 aaKnown RBP15.38■□□□□ 0.05
VCAN-211ENST00000513984 ZNF567Q8N184 647 aa15.38■□□□□ 0.05
VCAN-211ENST00000513984 SPATA17Q96L03 361 aa15.38■□□□□ 0.05
VCAN-211ENST00000513984 SENP1Q9P0U3 644 aa15.38■□□□□ 0.05
VCAN-211ENST00000513984 TCRBV9S1A1TA0A576 114 aa15.37■□□□□ 0.05
VCAN-211ENST00000513984 KCNU1A8MYU2 1149 aa15.37■□□□□ 0.05
VCAN-211ENST00000513984 FOXO6A8MYZ6 492 aa15.37■□□□□ 0.05
VCAN-211ENST00000513984 RASA4BC9J798 803 aa15.37■□□□□ 0.05
VCAN-211ENST00000513984 NDUFAB1O14561 156 aa15.37■□□□□ 0.05
VCAN-211ENST00000513984 MTSS1O43312 755 aa15.37■□□□□ 0.05
VCAN-211ENST00000513984 RASA4O43374 803 aa15.37■□□□□ 0.05
VCAN-211ENST00000513984 PAGE1O75459 146 aa15.37■□□□□ 0.05
VCAN-211ENST00000513984 GSTA2P09210 222 aa15.37■□□□□ 0.05
VCAN-211ENST00000513984 MLNP12872 115 aa15.37■□□□□ 0.05
VCAN-211ENST00000513984 BRAFP15056 766 aa15.37■□□□□ 0.05
VCAN-211ENST00000513984 GARSP41250 739 aaKnown RBP15.37■□□□□ 0.05
VCAN-211ENST00000513984 SARNPP82979 210 aaKnown RBP15.37■□□□□ 0.05
VCAN-211ENST00000513984 NRG1Q02297 640 aaPredicted RBP15.37■□□□□ 0.05
VCAN-211ENST00000513984 EFTUD2Q15029 972 aaKnown RBP eCLIP15.37■□□□□ 0.05
VCAN-211ENST00000513984 PARP6Q2NL67 630 aa15.37■□□□□ 0.05
VCAN-211ENST00000513984 ARTNQ5T4W7 220 aa15.37■□□□□ 0.05
VCAN-211ENST00000513984 FOXR1Q6PIV2 292 aa15.37■□□□□ 0.05
VCAN-211ENST00000513984 ADGRD1Q6QNK2 874 aa15.37■□□□□ 0.05
VCAN-211ENST00000513984 RNF19BQ6ZMZ0 732 aa15.37■□□□□ 0.05
VCAN-211ENST00000513984 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.37■□□□□ 0.05
VCAN-211ENST00000513984 CCT8L2Q96SF2 557 aa15.37■□□□□ 0.05
VCAN-211ENST00000513984 CYTH2Q99418 400 aa15.37■□□□□ 0.05
VCAN-211ENST00000513984 PAFAH2Q99487 392 aa15.37■□□□□ 0.05
VCAN-211ENST00000513984 RABEP2Q9H5N1 569 aa15.37■□□□□ 0.05
VCAN-211ENST00000513984 COMMD8Q9NX08 183 aa15.37■□□□□ 0.05
VCAN-211ENST00000513984 GMIPQ9P107 970 aa15.37■□□□□ 0.05
VCAN-211ENST00000513984 TLR6Q9Y2C9 796 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms