RNA–Protein interactions for RNA: ENST00000513756.5

PTPN20-229, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-229ENST00000513756 EBF2Q9HAK2 575 aa12.58□□□□□ -0.4
PTPN20-229ENST00000513756 THSD1Q9NS62 852 aa12.58□□□□□ -0.4
PTPN20-229ENST00000513756 FBXO2Q9UK22 296 aaPredicted RBP12.58□□□□□ -0.4
PTPN20-229ENST00000513756 FZD4Q9ULV1 537 aa12.58□□□□□ -0.4
PTPN20-229ENST00000513756 USP3Q9Y6I4 520 aa12.58□□□□□ -0.4
PTPN20-229ENST00000513756 UBE4BO95155 1302 aa12.58□□□□□ -0.4
PTPN20-229ENST00000513756 UBR5O95071 2799 aaPredicted RBP12.58□□□□□ -0.4
PTPN20-229ENST00000513756 A0A1W2PP55 124 aa12.57□□□□□ -0.4
PTPN20-229ENST00000513756 RNASEH2AO75792 299 aaKnown RBP12.57□□□□□ -0.4
PTPN20-229ENST00000513756 KIF20AO95235 890 aa12.57□□□□□ -0.4
PTPN20-229ENST00000513756 RPN1P04843 607 aaKnown RBP12.57□□□□□ -0.4
PTPN20-229ENST00000513756 MPOP05164 745 aa12.57□□□□□ -0.4
PTPN20-229ENST00000513756 ST8SIA6P61647 398 aa12.57□□□□□ -0.4
PTPN20-229ENST00000513756 DAB2P98082 770 aa12.57□□□□□ -0.4
PTPN20-229ENST00000513756 ZNF211Q13398 564 aaPredicted RBP12.57□□□□□ -0.4
PTPN20-229ENST00000513756 EPM2AIP1Q7L775 607 aaPredicted RBP12.57□□□□□ -0.4
PTPN20-229ENST00000513756 KANSL1Q7Z3B3 1105 aa12.57□□□□□ -0.4
PTPN20-229ENST00000513756 ZNF557Q8N988 423 aaPredicted RBP12.57□□□□□ -0.4
PTPN20-229ENST00000513756 MFSD2AQ8NA29 543 aa12.57□□□□□ -0.4
PTPN20-229ENST00000513756 HPS3Q969F9 1004 aa12.57□□□□□ -0.4
PTPN20-229ENST00000513756 TMA16Q96EY4 203 aaKnown RBP12.57□□□□□ -0.4
PTPN20-229ENST00000513756 CCDC97Q96F63 343 aaPredicted RBP12.57□□□□□ -0.4
PTPN20-229ENST00000513756 PANK2Q9BZ23 570 aa12.57□□□□□ -0.4
PTPN20-229ENST00000513756 GZF1Q9H116 711 aaPredicted RBP12.57□□□□□ -0.4
PTPN20-229ENST00000513756 NEUROG2Q9H2A3 272 aa12.57□□□□□ -0.4
PTPN20-229ENST00000513756 POLR1BQ9H9Y6 1135 aa12.57□□□□□ -0.4
PTPN20-229ENST00000513756 HMGXB4Q9UGU5 601 aa12.57□□□□□ -0.4
PTPN20-229ENST00000513756 PCDHB1Q9Y5F3 818 aa12.57□□□□□ -0.4
PTPN20-229ENST00000513756 ARID1BQ8NFD5 2236 aaPredicted RBP12.57□□□□□ -0.4
PTPN20-229ENST00000513756 MID1O15344 667 aa12.56□□□□□ -0.4
PTPN20-229ENST00000513756 EXOC3O60645 756 aa12.56□□□□□ -0.4
PTPN20-229ENST00000513756 USP12O75317 370 aa12.56□□□□□ -0.4
PTPN20-229ENST00000513756 C4BPAP04003 597 aaKnown RBP12.56□□□□□ -0.4
PTPN20-229ENST00000513756 SLFN14P0C7P3 912 aa12.56□□□□□ -0.4
PTPN20-229ENST00000513756 CASP4P49662 377 aa12.56□□□□□ -0.4
PTPN20-229ENST00000513756 AMPD3Q01432 767 aa12.56□□□□□ -0.4
PTPN20-229ENST00000513756 OVGP1Q12889 678 aa12.56□□□□□ -0.4
PTPN20-229ENST00000513756 TRIP4Q15650 581 aaPredicted RBP12.56□□□□□ -0.4
PTPN20-229ENST00000513756 CST6Q15828 149 aa12.56□□□□□ -0.4
PTPN20-229ENST00000513756 KMT5BQ4FZB7 885 aa12.56□□□□□ -0.4
PTPN20-229ENST00000513756 SND1Q7KZF4 910 aaKnown RBP eCLIP12.56□□□□□ -0.4
PTPN20-229ENST00000513756 IQCHQ86VS3 1027 aa12.56□□□□□ -0.4
PTPN20-229ENST00000513756 C12orf56Q8IXR9 622 aa12.56□□□□□ -0.4
PTPN20-229ENST00000513756 PARD3BQ8TEW8 1205 aa12.56□□□□□ -0.4
PTPN20-229ENST00000513756 CLIC6Q96NY7 704 aa12.56□□□□□ -0.4
PTPN20-229ENST00000513756 NT5C1AQ9BXI3 368 aa12.56□□□□□ -0.4
PTPN20-229ENST00000513756 DUSP16Q9BY84 665 aa12.56□□□□□ -0.4
PTPN20-229ENST00000513756 TNMDQ9H2S6 317 aa12.56□□□□□ -0.4
PTPN20-229ENST00000513756 OLA1Q9NTK5 396 aaKnown RBP12.56□□□□□ -0.4
PTPN20-229ENST00000513756 SERGEFQ9UGK8 458 aa12.56□□□□□ -0.4
PTPN20-229ENST00000513756 SMC3Q9UQE7 1217 aa12.56□□□□□ -0.4
PTPN20-229ENST00000513756 CLIC4Q9Y696 253 aa12.56□□□□□ -0.4
PTPN20-229ENST00000513756 K7ENP7 123 aa12.55□□□□□ -0.4
PTPN20-229ENST00000513756 WNT9AO14904 365 aa12.55□□□□□ -0.4
PTPN20-229ENST00000513756 SIGLEC6O43699 453 aa12.55□□□□□ -0.4
PTPN20-229ENST00000513756 SIN3BO75182 1162 aa12.55□□□□□ -0.4
PTPN20-229ENST00000513756 VNN1O95497 513 aa12.55□□□□□ -0.4
PTPN20-229ENST00000513756 LATS1O95835 1130 aa12.55□□□□□ -0.4
PTPN20-229ENST00000513756 GOT1P17174 413 aa12.55□□□□□ -0.4
PTPN20-229ENST00000513756 NUDT1P36639 197 aa12.55□□□□□ -0.4
PTPN20-229ENST00000513756 YWHAGP61981 247 aaKnown RBP eCLIP12.55□□□□□ -0.4
PTPN20-229ENST00000513756 ASIC1P78348 528 aa12.55□□□□□ -0.4
PTPN20-229ENST00000513756 CLDN10P78369 228 aa12.55□□□□□ -0.4
PTPN20-229ENST00000513756 INCA1Q0VD86 236 aa12.55□□□□□ -0.4
PTPN20-229ENST00000513756 KCNJ12Q14500 433 aa12.55□□□□□ -0.4
PTPN20-229ENST00000513756 HNRNPA1L2Q32P51 320 aaKnown RBP12.55□□□□□ -0.4
PTPN20-229ENST00000513756 SGO2Q562F6 1265 aa12.55□□□□□ -0.4
PTPN20-229ENST00000513756 FAM26FQ5R3K3 315 aa12.55□□□□□ -0.4
PTPN20-229ENST00000513756 ADGRF1Q5T601 910 aa12.55□□□□□ -0.4
PTPN20-229ENST00000513756 CDCP2Q5VXM1 449 aa12.55□□□□□ -0.4
PTPN20-229ENST00000513756 NAPEPLDQ6IQ20 393 aa12.55□□□□□ -0.4
PTPN20-229ENST00000513756 INO80CQ6PI98 192 aaPredicted RBP12.55□□□□□ -0.4
PTPN20-229ENST00000513756 PRPF39Q86UA1 669 aaKnown RBP12.55□□□□□ -0.4
PTPN20-229ENST00000513756 NELFCDQ8IXH7 590 aa12.55□□□□□ -0.4
PTPN20-229ENST00000513756 OR14C36Q8NHC7 312 aa12.55□□□□□ -0.4
PTPN20-229ENST00000513756 ELMO3Q96BJ8 720 aa12.55□□□□□ -0.4
PTPN20-229ENST00000513756 VCPIP1Q96JH7 1222 aa12.55□□□□□ -0.4
PTPN20-229ENST00000513756 IRX2Q9BZI1 471 aaPredicted RBP12.55□□□□□ -0.4
PTPN20-229ENST00000513756 TFIP11Q9UBB9 837 aaKnown RBP12.55□□□□□ -0.4
PTPN20-229ENST00000513756 SSUH2Q9Y2M2 353 aa12.55□□□□□ -0.4
PTPN20-229ENST00000513756 HBS1LQ9Y450 684 aaKnown RBP12.55□□□□□ -0.4
PTPN20-229ENST00000513756 TBC1D3DA0A087WVF3 549 aa12.54□□□□□ -0.4
PTPN20-229ENST00000513756 TBC1D3IA0A087WXS9 549 aa12.54□□□□□ -0.4
PTPN20-229ENST00000513756 TBC1D3EA0A087X179 549 aa12.54□□□□□ -0.4
PTPN20-229ENST00000513756 TBC1D3KA0A087X1G2 549 aa12.54□□□□□ -0.4
PTPN20-229ENST00000513756 TARSL2A2RTX5 802 aaKnown RBP12.54□□□□□ -0.4
PTPN20-229ENST00000513756 TBC1D3FA6NER0 549 aaPredicted RBP12.54□□□□□ -0.4
PTPN20-229ENST00000513756 LRRIQ3A6PVS8 624 aaPredicted RBP12.54□□□□□ -0.4
PTPN20-229ENST00000513756 TBC1D3LB9A6J9 549 aa12.54□□□□□ -0.4
PTPN20-229ENST00000513756 OPA1O60313 960 aa12.54□□□□□ -0.4
PTPN20-229ENST00000513756 CSO75390 466 aaKnown RBP12.54□□□□□ -0.4
PTPN20-229ENST00000513756 ADH1BP00325 375 aa12.54□□□□□ -0.4
PTPN20-229ENST00000513756 ASLP04424 464 aa12.54□□□□□ -0.4
PTPN20-229ENST00000513756 TBC1D3HP0C7X1 549 aa12.54□□□□□ -0.4
PTPN20-229ENST00000513756 RBMS1P29558 406 aaKnown RBP12.54□□□□□ -0.4
PTPN20-229ENST00000513756 SLC8A1P32418 973 aa12.54□□□□□ -0.4
PTPN20-229ENST00000513756 ASPAP45381 313 aa12.54□□□□□ -0.4
PTPN20-229ENST00000513756 ARID5BQ14865 1188 aa12.54□□□□□ -0.4
PTPN20-229ENST00000513756 COLEC12Q5KU26 742 aa12.54□□□□□ -0.4
PTPN20-229ENST00000513756 MPP7Q5T2T1 576 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms