RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 IGSF21Q96ID5 467 aa8.63□□□□□ -1.03
RNF4-220ENST00000513578 C9orf72Q96LT7 481 aa8.63□□□□□ -1.03
RNF4-220ENST00000513578 PWWP2AQ96N64 755 aa8.63□□□□□ -1.03
RNF4-220ENST00000513578 TSGA13Q96PP4 275 aa8.63□□□□□ -1.03
RNF4-220ENST00000513578 HERC2P3Q9BVR0 1158 aa8.63□□□□□ -1.03
RNF4-220ENST00000513578 RETREG1Q9H6L5 497 aa8.63□□□□□ -1.03
RNF4-220ENST00000513578 LRRC4CQ9HCJ2 640 aa8.63□□□□□ -1.03
RNF4-220ENST00000513578 XAB2Q9HCS7 855 aaKnown RBP8.63□□□□□ -1.03
RNF4-220ENST00000513578 TMPRSS4Q9NRS4 437 aa8.63□□□□□ -1.03
RNF4-220ENST00000513578 RAB6BQ9NRW1 208 aa8.63□□□□□ -1.03
RNF4-220ENST00000513578 STK39Q9UEW8 545 aa8.63□□□□□ -1.03
RNF4-220ENST00000513578 OR12D3Q9UGF7 316 aa8.63□□□□□ -1.03
RNF4-220ENST00000513578 SLC12A6Q9UHW9 1150 aa8.63□□□□□ -1.03
RNF4-220ENST00000513578 TEX264Q9Y6I9 313 aa8.63□□□□□ -1.03
RNF4-220ENST00000513578 OBSL1O75147 1896 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 SYNJ2BP-COX16A0A087WUM0 186 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 TCRBV7S3A2A0A539 114 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 LRIG2O94898 1065 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 ABLIM3O94929 683 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 IGLV3-27P01718 113 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 SOD2P04179 222 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 CPB1P15086 417 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 VAV1P15498 845 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 ATP2A2P16615 1042 aaKnown RBP8.62□□□□□ -1.03
RNF4-220ENST00000513578 LAG3P18627 525 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 IRAK1P51617 712 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 KPNA1P52294 538 aaPredicted RBP8.62□□□□□ -1.03
RNF4-220ENST00000513578 MLLT6P55198 1093 aaPredicted RBP8.62□□□□□ -1.03
RNF4-220ENST00000513578 GPX6P59796 221 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 MAGOHP61326 146 aaKnown RBP8.62□□□□□ -1.03
RNF4-220ENST00000513578 BASP1P80723 227 aaKnown RBP8.62□□□□□ -1.03
RNF4-220ENST00000513578 SARNPP82979 210 aaKnown RBP8.62□□□□□ -1.03
RNF4-220ENST00000513578 COG7P83436 770 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 DSG1Q02413 1049 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 RING1Q06587 406 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 TRIP4Q15650 581 aaPredicted RBP8.62□□□□□ -1.03
RNF4-220ENST00000513578 DDR2Q16832 855 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 KLHL38Q2WGJ6 581 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 ANKRD20A2Q5SQ80 823 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 FNBP1LQ5T0N5 605 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 UBAP2Q5T6F2 1119 aaKnown RBP8.62□□□□□ -1.03
RNF4-220ENST00000513578 ANKRD20A1Q5TYW2 823 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 ANKRD20A3Q5VUR7 823 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 AFMIDQ63HM1 303 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 TPGS2Q68CL5 300 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 RSPO2Q6UXX9 243 aaPredicted RBP8.62□□□□□ -1.03
RNF4-220ENST00000513578 RNF19BQ6ZMZ0 732 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 CYS1Q717R9 158 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 TAOK1Q7L7X3 1001 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 DEFB128Q7Z7B8 93 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 TMEM173Q86WV6 379 aaPredicted RBP8.62□□□□□ -1.03
RNF4-220ENST00000513578 CEP57Q86XR8 500 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 ZBED8Q8IZ13 594 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 SLC39A11Q8N1S5 342 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 ATAD1Q8NBU5 361 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 PDZD8Q8NEN9 1154 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 FBXO22Q8NEZ5 403 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 ADAM32Q8TC27 787 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 EPS8L3Q8TE67 593 aaKnown RBP8.62□□□□□ -1.03
RNF4-220ENST00000513578 DIS3LQ8TF46 1054 aaKnown RBP8.62□□□□□ -1.03
RNF4-220ENST00000513578 PYROXD1Q8WU10 500 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 FATE1Q969F0 183 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 P2RY11Q96G91 374 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 FCRL2Q96LA5 508 aaPredicted RBP8.62□□□□□ -1.03
RNF4-220ENST00000513578 CDK5RAP1Q96SZ6 601 aaKnown RBP8.62□□□□□ -1.03
RNF4-220ENST00000513578 DHRS4Q9BTZ2 278 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 UBE2OQ9C0C9 1292 aaKnown RBP8.62□□□□□ -1.03
RNF4-220ENST00000513578 PRDM12Q9H4Q4 367 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 CATSPERBQ9H7T0 1116 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 ETNK1Q9HBU6 452 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 TLR8Q9NR97 1041 aaKnown RBP8.62□□□□□ -1.03
RNF4-220ENST00000513578 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.62□□□□□ -1.03
RNF4-220ENST00000513578 OSER1Q9NX31 292 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 DONSONQ9NYP3 566 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 COX16Q9P0S2 106 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 PPARGC1AQ9UBK2 798 aaKnown RBP8.62□□□□□ -1.03
RNF4-220ENST00000513578 AFF4Q9UHB7 1163 aaKnown RBP8.62□□□□□ -1.03
RNF4-220ENST00000513578 TRHDEQ9UKU6 1024 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 NEU3Q9UQ49 428 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 ATP11BQ9Y2G3 1177 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 HTTP42858 3142 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 PLXNA4Q9HCM2 1894 aa8.62□□□□□ -1.03
RNF4-220ENST00000513578 NYNRINQ9P2P1 1898 aaKnown RBP8.62□□□□□ -1.03
RNF4-220ENST00000513578 CLUHO75153 1309 aa8.61□□□□□ -1.03
RNF4-220ENST00000513578 MTCL1Q9Y4B5 1905 aaKnown RBP8.61□□□□□ -1.03
RNF4-220ENST00000513578 WDR27A2RRH5 827 aa8.61□□□□□ -1.03
RNF4-220ENST00000513578 SLC38A8A6NNN8 435 aa8.61□□□□□ -1.03
RNF4-220ENST00000513578 ERI2A8K979 691 aaKnown RBP8.61□□□□□ -1.03
RNF4-220ENST00000513578 TRDMT1O14717 391 aaKnown RBP8.61□□□□□ -1.03
RNF4-220ENST00000513578 CACNG3O60359 315 aa8.61□□□□□ -1.03
RNF4-220ENST00000513578 PAGE1O75459 146 aa8.61□□□□□ -1.03
RNF4-220ENST00000513578 FAM155BO75949 473 aa8.61□□□□□ -1.03
RNF4-220ENST00000513578 METTL18O95568 372 aa8.61□□□□□ -1.03
RNF4-220ENST00000513578 MYCP01106 439 aaPredicted RBP8.61□□□□□ -1.03
RNF4-220ENST00000513578 CCNCP24863 283 aa8.61□□□□□ -1.03
RNF4-220ENST00000513578 GCAP28676 217 aa8.61□□□□□ -1.03
RNF4-220ENST00000513578 EPHB2P29323 1055 aa8.61□□□□□ -1.03
RNF4-220ENST00000513578 GARSP41250 739 aaKnown RBP8.61□□□□□ -1.03
RNF4-220ENST00000513578 LMAN1P49257 510 aa8.61□□□□□ -1.03
RNF4-220ENST00000513578 GPR15P49685 360 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms