RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 HMOX2P30519 316 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 ADRA1BP35368 520 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 CHKAP35790 457 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 ITIH4Q14624 930 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 RBBP7Q16576 425 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 PSTKQ8IV42 348 aaKnown RBP13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 KIF2BQ8N4N8 673 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 NPLOC4Q8TAT6 608 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 TEKT4Q8WW24 435 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 CMTM5Q96DZ9 223 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 LGMNQ99538 433 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 CTNNAL1Q9UBT7 734 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 CHD4Q14839 1912 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 DAB1O75553 588 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 VAPBO95292 243 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 AMHP03971 560 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 PSMB4P28070 264 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 CORO7P57737 925 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 DNAL1Q4LDG9 190 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 ANKS3Q6ZW76 656 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 STK32AQ8WU08 396 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 DEFB118Q96PH6 123 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 ADGRE3Q9BY15 652 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 PRKD2Q9BZL6 878 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 SUDS3Q9H7L9 328 aaPredicted RBP13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 MORF4L1Q9UBU8 362 aa13.43□□□□□ -0.26
PCDHA4-202ENST00000512229 SUPT3HB4E1H0 165 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 SUPT3HO75486 399 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 SUPT7LO94864 414 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 RALBP11234 206 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 GRK2P25098 689 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 PSEN1P49768 467 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 TARBP2Q15633 366 aaKnown RBP13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 THEMIS2Q5TEJ8 643 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 FBXW10Q5XX13 1052 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 REM2Q8IYK8 340 aaPredicted RBP13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 SLC26A7Q8TE54 656 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 SCUBE2Q9NQ36 999 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 MRGBPQ9NV56 204 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 CD274Q9NZQ7 290 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 MYL4P12829 197 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 CDKN2BP42772 138 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 AP2B1P63010 937 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 PRKCZQ05513 592 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 GRB14Q14449 540 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 MON1AQ86VX9 555 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 KCNMB4Q86W47 210 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 CD99L2Q8TCZ2 262 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 NKD2Q969F2 451 aaPredicted RBP13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 SPDL1Q96EA4 605 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 AKAP11Q9UKA4 1901 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 HADHAP40939 763 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 CLCNKBP51801 687 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 FAM187BQ17R55 369 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 PTAR1Q7Z6K3 402 aaPredicted RBP13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 KAT2BQ92831 832 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 BORCS6Q96GS4 357 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 NSL1Q96IY1 281 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 TRMT6Q9UJA5 497 aaKnown RBP13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 SRP72O76094 671 aaKnown RBP13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 ASMTLO95671 621 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 GLP2RO95838 553 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 BGNP21810 368 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 TBCCQ15814 346 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 AARS2Q5JTZ9 985 aaKnown RBP13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 SPANXN3Q5MJ09 141 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 RASIP1Q5U651 963 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 TMA16Q96EY4 203 aaKnown RBP13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 SRPK1Q96SB4 655 aaKnown RBP13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 PCYT2Q99447 389 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 THTPAQ9BU02 230 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 GPAMQ9HCL2 828 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 STYXL1Q9Y6J8 313 aa13.42□□□□□ -0.26
PCDHA4-202ENST00000512229 NT5C1B-RDH14C9J2C7 533 aa13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 ALOX15BO15296 676 aa13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 TSPAN3O60637 253 aa13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 ASPAP45381 313 aa13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 CD151P48509 253 aa13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 DDR2Q16832 855 aa13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 SDHAF4Q5VUM1 108 aa13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 CDCA2Q69YH5 1023 aaPredicted RBP13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 PDZD8Q8NEN9 1154 aa13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 SNX19Q92543 992 aa13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 PBXIP1Q96AQ6 731 aa13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 CCDC126Q96EE4 140 aa13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 ZNF558Q96NG5 402 aa13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 TRIM15Q9C019 465 aa13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 SLC27A5Q9Y2P5 690 aa13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 ABHD2P08910 425 aa13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 EDNRBP24530 442 aa13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 KLRC2P26717 231 aa13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 MAP4P27816 1152 aaKnown RBP13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 ERFP50548 548 aa13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 XRCC4Q13426 336 aa13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 NOMO1Q15155 1222 aa13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 PABPC1LQ4VXU2 614 aaKnown RBP13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 PRPF39Q86UA1 669 aaKnown RBP13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 LONP2Q86WA8 852 aa13.41□□□□□ -0.26
PCDHA4-202ENST00000512229 HNRNPABQ99729 332 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms