RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 OSBPL2Q9H1P3 480 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 FAM204AQ9H8W3 233 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 GDF3Q9NR23 364 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 FAM114A2Q9NRY5 505 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 DDIT4Q9NX09 232 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 DONSONQ9NYP3 566 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 SMARCAL1Q9NZC9 954 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 PCSK1NQ9UHG2 260 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 TLR6Q9Y2C9 796 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 ZDBF2Q9HCK1 2354 aa9.43□□□□□ -0.9
NR1I3-228ENST00000511676 SLC38A8A6NNN8 435 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 SOBPA7XYQ1 873 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 SMAPO00193 183 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 APOL1O14791 398 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 RAD51CO43502 376 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 LIASO43766 372 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 FGF19O95750 216 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 CNPP09543 421 aaKnown RBP9.42□□□□□ -0.9
NR1I3-228ENST00000511676 RHOXF2BP0C7M4 288 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 ATF6P18850 670 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 HOXC13P31276 330 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 STIP1P31948 543 aaKnown RBP9.42□□□□□ -0.9
NR1I3-228ENST00000511676 CCR1P32246 355 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 ELF1P32519 619 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 GJC1P36383 396 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 ALDH1A3P47895 512 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 VCPP55072 806 aaKnown RBP9.42□□□□□ -0.9
NR1I3-228ENST00000511676 CAV1Q03135 178 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 DUSP4Q13115 394 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 PTK6Q13882 451 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 BYSLQ13895 437 aaKnown RBP9.42□□□□□ -0.9
NR1I3-228ENST00000511676 PUM1Q14671 1186 aaKnown RBP eCLIP9.42□□□□□ -0.9
NR1I3-228ENST00000511676 ANGPT1Q15389 498 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 OASLQ15646 514 aaKnown RBP9.42□□□□□ -0.9
NR1I3-228ENST00000511676 SMTNL2Q2TAL5 461 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 ZNF528Q3MIS6 628 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 ATP13A4Q4VNC1 1196 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 PABPC1LQ4VXU2 614 aaKnown RBP9.42□□□□□ -0.9
NR1I3-228ENST00000511676 SH3PXD2AQ5TCZ1 1133 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 DAB2IPQ5VWQ8 1189 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 DUPD1Q68J44 220 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 SCYL2Q6P3W7 929 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 PDZD4Q76G19 769 aaPredicted RBP9.42□□□□□ -0.9
NR1I3-228ENST00000511676 TAC4Q86UU9 113 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 JAMLQ86YT9 394 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 SIX5Q8N196 739 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 CCDC89Q8N998 374 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 BBOF1Q8ND07 529 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 STKLD1Q8NE28 680 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.42□□□□□ -0.9
NR1I3-228ENST00000511676 SMG7Q92540 1137 aaKnown RBP9.42□□□□□ -0.9
NR1I3-228ENST00000511676 HSPH1Q92598 858 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 FBXO32Q969P5 355 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 HAUS1Q96CS2 278 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 B3GALT6Q96L58 329 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 C1orf74Q96LT6 269 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 PGLYRP2Q96PD5 576 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 SEPT5Q99719 369 aaPredicted RBP9.42□□□□□ -0.9
NR1I3-228ENST00000511676 HINFPQ9BQA5 517 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 RHOXF2Q9BQY4 288 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 ERP44Q9BS26 406 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 CALN1Q9BXU9 219 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 MAK16Q9BXY0 300 aaKnown RBP9.42□□□□□ -0.9
NR1I3-228ENST00000511676 ADAM33Q9BZ11 813 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 FOXP3Q9BZS1 431 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 BRD8Q9H0E9 1235 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 WDCPQ9H6R7 721 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 ARFGAP3Q9NP61 516 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 MAN1C1Q9NR34 630 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 PIGVQ9NUD9 493 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.42□□□□□ -0.9
NR1I3-228ENST00000511676 ARHGEF38Q9NXL2 777 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 AMACRQ9UHK6 382 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 NAALADL1Q9UQQ1 740 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 HBS1LQ9Y450 684 aaKnown RBP9.42□□□□□ -0.9
NR1I3-228ENST00000511676 YIPF1Q9Y548 306 aa9.42□□□□□ -0.9
NR1I3-228ENST00000511676 KIAA1671Q9BY89 1806 aa9.41□□□□□ -0.9
NR1I3-228ENST00000511676 A0A1W2PQH9 124 aa9.41□□□□□ -0.9
NR1I3-228ENST00000511676 TCRBV7S2A1N4TA0A589 114 aa9.41□□□□□ -0.9
NR1I3-228ENST00000511676 HACD1B0YJ81 288 aa9.41□□□□□ -0.9
NR1I3-228ENST00000511676 PRR5-ARHGAP8B1AHC4 643 aa9.41□□□□□ -0.9
NR1I3-228ENST00000511676 MCF2LO15068 1137 aa9.41□□□□□ -0.9
NR1I3-228ENST00000511676 FGF10O15520 208 aaPredicted RBP9.41□□□□□ -0.9
NR1I3-228ENST00000511676 CST8O60676 142 aa9.41□□□□□ -0.9
NR1I3-228ENST00000511676 PAPLNO95428 1278 aa9.41□□□□□ -0.9
NR1I3-228ENST00000511676 IGLV3-27P01718 113 aa9.41□□□□□ -0.9
NR1I3-228ENST00000511676 EPCAMP16422 314 aa9.41□□□□□ -0.9
NR1I3-228ENST00000511676 TFE3P19532 575 aaPredicted RBP9.41□□□□□ -0.9
NR1I3-228ENST00000511676 SP100P23497 879 aaPredicted RBP9.41□□□□□ -0.9
NR1I3-228ENST00000511676 SERPINB6P35237 376 aa9.41□□□□□ -0.9
NR1I3-228ENST00000511676 PTGIRP43119 386 aa9.41□□□□□ -0.9
NR1I3-228ENST00000511676 EPHB3P54753 998 aa9.41□□□□□ -0.9
NR1I3-228ENST00000511676 ARPP19P56211 112 aa9.41□□□□□ -0.9
NR1I3-228ENST00000511676 ARHGAP8P85298 464 aa9.41□□□□□ -0.9
NR1I3-228ENST00000511676 ZNF33AQ06730 810 aa9.41□□□□□ -0.9
NR1I3-228ENST00000511676 NOMO1Q15155 1222 aa9.41□□□□□ -0.9
NR1I3-228ENST00000511676 TRIP4Q15650 581 aaPredicted RBP9.41□□□□□ -0.9
NR1I3-228ENST00000511676 ANKRD20A8PQ5CZ79 823 aa9.41□□□□□ -0.9
NR1I3-228ENST00000511676 KCNT1Q5JUK3 1230 aa9.41□□□□□ -0.9
NR1I3-228ENST00000511676 SPDYCQ5MJ68 293 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms