RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 LNP1A1A4G5 178 aa7.1□□□□□ -1.27
COPS4-209ENST00000511653 C2orf78A6NCI8 922 aa7.1□□□□□ -1.27
COPS4-209ENST00000511653 ATG13O75143 517 aa7.1□□□□□ -1.27
COPS4-209ENST00000511653 NOL4O94818 638 aa7.1□□□□□ -1.27
COPS4-209ENST00000511653 ITGB3P05106 788 aa7.1□□□□□ -1.27
COPS4-209ENST00000511653 CKMP06732 381 aa7.1□□□□□ -1.27
COPS4-209ENST00000511653 CSH1P0DML2 217 aa7.1□□□□□ -1.27
COPS4-209ENST00000511653 CSH2P0DML3 217 aa7.1□□□□□ -1.27
COPS4-209ENST00000511653 DRD1P21728 446 aa7.1□□□□□ -1.27
COPS4-209ENST00000511653 PAX3P23760 479 aa7.1□□□□□ -1.27
COPS4-209ENST00000511653 DDX6P26196 483 aaKnown RBP eCLIP7.1□□□□□ -1.27
COPS4-209ENST00000511653 CASP5P51878 434 aa7.1□□□□□ -1.27
COPS4-209ENST00000511653 ZNF143P52747 638 aaPredicted RBP7.1□□□□□ -1.27
COPS4-209ENST00000511653 RNF4P78317 190 aa7.1□□□□□ -1.27
COPS4-209ENST00000511653 ZXDBP98169 803 aa7.1□□□□□ -1.27
COPS4-209ENST00000511653 TSPY1Q01534 308 aa7.1□□□□□ -1.27
COPS4-209ENST00000511653 CREB5Q02930 508 aa7.1□□□□□ -1.27
COPS4-209ENST00000511653 CYP4F3Q08477 520 aa7.1□□□□□ -1.27
COPS4-209ENST00000511653 MESP2Q0VG99 397 aa7.1□□□□□ -1.27
COPS4-209ENST00000511653 SMARCB1Q12824 385 aa7.1□□□□□ -1.27
COPS4-209ENST00000511653 DMC1Q14565 340 aa7.1□□□□□ -1.27
COPS4-209ENST00000511653 ZNF268Q14587 947 aaPredicted RBP7.1□□□□□ -1.27
COPS4-209ENST00000511653 SFTPA1Q8IWL2 248 aa7.1□□□□□ -1.27
COPS4-209ENST00000511653 DCP1BQ8IZD4 617 aaKnown RBP7.1□□□□□ -1.27
COPS4-209ENST00000511653 LEO1Q8WVC0 666 aaPredicted RBP7.1□□□□□ -1.27
COPS4-209ENST00000511653 OSCP1Q8WVF1 389 aa7.1□□□□□ -1.27
COPS4-209ENST00000511653 POMGNT1Q8WZA1 660 aa7.1□□□□□ -1.27
COPS4-209ENST00000511653 TMX3Q96JJ7 454 aa7.1□□□□□ -1.27
COPS4-209ENST00000511653 AK8Q96MA6 479 aa7.1□□□□□ -1.27
COPS4-209ENST00000511653 ZNF560Q96MR9 790 aa7.1□□□□□ -1.27
COPS4-209ENST00000511653 MCMBPQ9BTE3 642 aa7.1□□□□□ -1.27
COPS4-209ENST00000511653 LSM14BQ9BX40 385 aaKnown RBP7.1□□□□□ -1.27
COPS4-209ENST00000511653 FGFBP2Q9BYJ0 223 aa7.1□□□□□ -1.27
COPS4-209ENST00000511653 TPSD1Q9BZJ3 242 aa7.1□□□□□ -1.27
COPS4-209ENST00000511653 EPN3Q9H201 632 aa7.1□□□□□ -1.27
COPS4-209ENST00000511653 ST6GALNAC4Q9H4F1 302 aa7.1□□□□□ -1.27
COPS4-209ENST00000511653 VPS45Q9NRW7 570 aa7.1□□□□□ -1.27
COPS4-209ENST00000511653 DDX43Q9NXZ2 648 aaKnown RBP7.1□□□□□ -1.27
COPS4-209ENST00000511653 WHRNQ9P202 907 aa7.1□□□□□ -1.27
COPS4-209ENST00000511653 CGGBP1Q9UFW8 167 aaPredicted RBP7.1□□□□□ -1.27
COPS4-209ENST00000511653 GTF3C4Q9UKN8 822 aa7.1□□□□□ -1.27
COPS4-209ENST00000511653 INVSQ9Y283 1065 aa7.1□□□□□ -1.27
COPS4-209ENST00000511653 CAPN6Q9Y6Q1 641 aa7.1□□□□□ -1.27
COPS4-209ENST00000511653 PTPRJQ12913 1337 aa7.1□□□□□ -1.27
COPS4-209ENST00000511653 PCDH15Q96QU1 1955 aa7.1□□□□□ -1.27
COPS4-209ENST00000511653 BCLAF3A2AJT9 711 aaKnown RBP7.09□□□□□ -1.27
COPS4-209ENST00000511653 C4orf47A7E2U8 309 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 PATE3B3GLJ2 98 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 H3BQV1 296 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 SLC26A4O43511 780 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 PRAMEF1O95521 474 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 APBB3O95704 486 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 TOP3BO95985 862 aaKnown RBP7.09□□□□□ -1.27
COPS4-209ENST00000511653 C1QTNF9P0C862 333 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 HNRNPLP14866 589 aaKnown RBP eCLIP7.09□□□□□ -1.27
COPS4-209ENST00000511653 SPINK2P20155 84 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 BCKDHBP21953 392 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 SCP2P22307 547 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 DDIT3P35638 169 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 CTSKP43235 329 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 TFAMQ00059 246 aaKnown RBP7.09□□□□□ -1.27
COPS4-209ENST00000511653 PDGFRLQ15198 375 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 PTPAQ15257 358 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 NFE2Q16621 373 aaPredicted RBP7.09□□□□□ -1.27
COPS4-209ENST00000511653 GAB4Q2WGN9 574 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 LMBRD2Q68DH5 695 aaPredicted RBP7.09□□□□□ -1.27
COPS4-209ENST00000511653 CC2D1AQ6P1N0 951 aaPredicted RBP7.09□□□□□ -1.27
COPS4-209ENST00000511653 SYT13Q7L8C5 426 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 ZNF720Q7Z2F6 126 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 BRSK2Q8IWQ3 736 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 CPA6Q8N4T0 437 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 CAMKK1Q8N5S9 505 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 ARL14EPQ8N8R7 260 aaPredicted RBP7.09□□□□□ -1.27
COPS4-209ENST00000511653 BVESQ8NE79 360 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 RASSF8Q8NHQ8 419 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 BTN2A2Q8WVV5 523 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 CD101Q93033 1021 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 TRMT2BQ96GJ1 504 aaKnown RBP7.09□□□□□ -1.27
COPS4-209ENST00000511653 EPSTI1Q96J88 318 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 FAM213AQ9BRX8 229 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 STRA6Q9BX79 667 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 LINC00597Q9H2U6 94 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 DUS2Q9NX74 493 aaKnown RBP7.09□□□□□ -1.27
COPS4-209ENST00000511653 TBC1D7Q9P0N9 293 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 GCNT4Q9P109 453 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 SIX4Q9UIU6 781 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 AGAP1Q9UPQ3 857 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 EMC9Q9Y3B6 208 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 ASXL3Q9C0F0 2248 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 TRAV19A0A0A6YYK7 116 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 GOLGA8IPA6NC78 632 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 MYMKA6NI61 221 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 GOLGA8JA6NMD2 632 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 ATP2C2O75185 946 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 IL18RAPO95256 599 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 ASMTLO95671 621 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 CAVIN2O95810 425 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 PROCP04070 461 aa7.09□□□□□ -1.27
COPS4-209ENST00000511653 LONP1P36776 959 aaKnown RBP7.09□□□□□ -1.27
COPS4-209ENST00000511653 OPRD1P41143 372 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms