RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 FAM72CH0Y354 149 aa15.68■□□□□ 0.1
SCLT1-209ENST00000511426 KCNN4O15554 427 aa15.68■□□□□ 0.1
SCLT1-209ENST00000511426 MSI1O43347 362 aaKnown RBP15.68■□□□□ 0.1
SCLT1-209ENST00000511426 MFSD11O43934 449 aa15.68■□□□□ 0.1
SCLT1-209ENST00000511426 LPXNO60711 386 aa15.68■□□□□ 0.1
SCLT1-209ENST00000511426 GCATO75600 419 aa15.68■□□□□ 0.1
SCLT1-209ENST00000511426 CXCL14O95715 111 aa15.68■□□□□ 0.1
SCLT1-209ENST00000511426 EIF3BP55884 814 aaKnown RBP15.68■□□□□ 0.1
SCLT1-209ENST00000511426 DHX9Q08211 1270 aaKnown RBP15.68■□□□□ 0.1
SCLT1-209ENST00000511426 TWF1Q12792 350 aa15.68■□□□□ 0.1
SCLT1-209ENST00000511426 EFEMP1Q12805 493 aa15.68■□□□□ 0.1
SCLT1-209ENST00000511426 PRKD1Q15139 912 aaPredicted RBP15.68■□□□□ 0.1
SCLT1-209ENST00000511426 TRIP13Q15645 432 aaPredicted RBP15.68■□□□□ 0.1
SCLT1-209ENST00000511426 HSP90B2PQ58FF3 399 aa15.68■□□□□ 0.1
SCLT1-209ENST00000511426 RNASEH2BQ5TBB1 312 aaKnown RBP15.68■□□□□ 0.1
SCLT1-209ENST00000511426 FAM72AQ5TYM5 149 aa15.68■□□□□ 0.1
SCLT1-209ENST00000511426 FAM72DQ6L9T8 149 aa15.68■□□□□ 0.1
SCLT1-209ENST00000511426 LRRC31Q6UY01 552 aa15.68■□□□□ 0.1
SCLT1-209ENST00000511426 PPP1R21Q6ZMI0 780 aa15.68■□□□□ 0.1
SCLT1-209ENST00000511426 CROCCP2Q86T23 111 aa15.68■□□□□ 0.1
SCLT1-209ENST00000511426 FAM72BQ86X60 149 aa15.68■□□□□ 0.1
SCLT1-209ENST00000511426 IQCKQ8N0W5 287 aa15.68■□□□□ 0.1
SCLT1-209ENST00000511426 KRT222Q8N1A0 295 aa15.68■□□□□ 0.1
SCLT1-209ENST00000511426 GOLGA6L1Q8N7Z2 621 aa15.68■□□□□ 0.1
SCLT1-209ENST00000511426 FAM71DQ8N9W8 422 aa15.68■□□□□ 0.1
SCLT1-209ENST00000511426 PLD4Q96BZ4 506 aa15.68■□□□□ 0.1
SCLT1-209ENST00000511426 VAT1Q99536 393 aa15.68■□□□□ 0.1
SCLT1-209ENST00000511426 KLC2Q9H0B6 622 aa15.68■□□□□ 0.1
SCLT1-209ENST00000511426 FARP1Q9Y4F1 1045 aaPredicted RBP15.68■□□□□ 0.1
SCLT1-209ENST00000511426 NR2E3Q9Y5X4 410 aa15.68■□□□□ 0.1
SCLT1-209ENST00000511426 LINC01553A4QN01 128 aa15.67■□□□□ 0.1
SCLT1-209ENST00000511426 CHADO15335 359 aa15.67■□□□□ 0.1
SCLT1-209ENST00000511426 EIF3HO15372 352 aaKnown RBP eCLIP15.67■□□□□ 0.1
SCLT1-209ENST00000511426 OPHN1O60890 802 aa15.67■□□□□ 0.1
SCLT1-209ENST00000511426 LATS1O95835 1130 aa15.67■□□□□ 0.1
SCLT1-209ENST00000511426 SYN1P17600 705 aa15.67■□□□□ 0.1
SCLT1-209ENST00000511426 RPL22P35268 128 aaKnown RBP15.67■□□□□ 0.1
SCLT1-209ENST00000511426 MAGEA6P43360 314 aa15.67■□□□□ 0.1
SCLT1-209ENST00000511426 GDF10P55107 478 aa15.67■□□□□ 0.1
SCLT1-209ENST00000511426 SLC10A2Q12908 348 aaPredicted RBP15.67■□□□□ 0.1
SCLT1-209ENST00000511426 DNAJB7Q7Z6W7 309 aaPredicted RBP15.67■□□□□ 0.1
SCLT1-209ENST00000511426 MRPL43Q8N983 215 aaKnown RBP15.67■□□□□ 0.1
SCLT1-209ENST00000511426 HTR3CQ8WXA8 447 aa15.67■□□□□ 0.1
SCLT1-209ENST00000511426 KLHL5Q96PQ7 755 aa15.67■□□□□ 0.1
SCLT1-209ENST00000511426 TCF25Q9BQ70 676 aa15.67■□□□□ 0.1
SCLT1-209ENST00000511426 ADAM7Q9H2U9 754 aa15.67■□□□□ 0.1
SCLT1-209ENST00000511426 PABPC3Q9H361 631 aaKnown RBP15.67■□□□□ 0.1
SCLT1-209ENST00000511426 ENTPD7Q9NQZ7 604 aa15.67■□□□□ 0.1
SCLT1-209ENST00000511426 TLR9Q9NR96 1032 aa15.67■□□□□ 0.1
SCLT1-209ENST00000511426 TMPRSS4Q9NRS4 437 aa15.67■□□□□ 0.1
SCLT1-209ENST00000511426 ETNK2Q9NVF9 386 aa15.67■□□□□ 0.1
SCLT1-209ENST00000511426 NEU3Q9UQ49 428 aa15.67■□□□□ 0.1
SCLT1-209ENST00000511426 IGLV3-10A0A075B6K4 115 aa15.67■□□□□ 0.1
SCLT1-209ENST00000511426 TGM5O43548 720 aa15.67■□□□□ 0.1
SCLT1-209ENST00000511426 OPA1O60313 960 aa15.67■□□□□ 0.1
SCLT1-209ENST00000511426 FGF19O95750 216 aa15.67■□□□□ 0.1
SCLT1-209ENST00000511426 NUDT17P0C025 328 aa15.67■□□□□ 0.1
SCLT1-209ENST00000511426 RBL1P28749 1068 aa15.67■□□□□ 0.1
SCLT1-209ENST00000511426 VPS41P49754 854 aa15.67■□□□□ 0.1
SCLT1-209ENST00000511426 PMS2P54278 862 aa15.67■□□□□ 0.1
SCLT1-209ENST00000511426 PPIDQ08752 370 aaKnown RBP15.67■□□□□ 0.1
SCLT1-209ENST00000511426 GALNT2Q10471 571 aa15.67■□□□□ 0.1
SCLT1-209ENST00000511426 ELMOD1Q8N336 334 aa15.67■□□□□ 0.1
SCLT1-209ENST00000511426 GDAP1L1Q96MZ0 367 aa15.67■□□□□ 0.1
SCLT1-209ENST00000511426 MAGEB5Q9BZ81 275 aa15.67■□□□□ 0.1
SCLT1-209ENST00000511426 DPP7Q9UHL4 492 aa15.67■□□□□ 0.1
SCLT1-209ENST00000511426 ZMYND8Q9ULU4 1186 aaPredicted RBP15.67■□□□□ 0.1
SCLT1-209ENST00000511426 HS3ST4Q9Y661 456 aa15.67■□□□□ 0.1
SCLT1-209ENST00000511426 A0A0A0MRY4 1105 aa15.66■□□□□ 0.1
SCLT1-209ENST00000511426 SLC12A8A0AV02 714 aa15.66■□□□□ 0.1
SCLT1-209ENST00000511426 E9PAM4 449 aa15.66■□□□□ 0.1
SCLT1-209ENST00000511426 GLUD1P00367 558 aa15.66■□□□□ 0.1
SCLT1-209ENST00000511426 OAS1P00973 400 aaKnown RBP15.66■□□□□ 0.1
SCLT1-209ENST00000511426 LRG1P02750 347 aa15.66■□□□□ 0.1
SCLT1-209ENST00000511426 RHOQP17081 205 aa15.66■□□□□ 0.1
SCLT1-209ENST00000511426 HOXA9P31269 272 aa15.66■□□□□ 0.1
SCLT1-209ENST00000511426 HSD17B3P37058 310 aa15.66■□□□□ 0.1
SCLT1-209ENST00000511426 FDFT1P37268 417 aa15.66■□□□□ 0.1
SCLT1-209ENST00000511426 HARS2P49590 506 aaKnown RBP15.66■□□□□ 0.1
SCLT1-209ENST00000511426 CDK16Q00536 496 aa15.66■□□□□ 0.1
SCLT1-209ENST00000511426 RTL3Q8N8U3 475 aaKnown RBP15.66■□□□□ 0.1
SCLT1-209ENST00000511426 NAT8LQ8N9F0 302 aa15.66■□□□□ 0.1
SCLT1-209ENST00000511426 GLIS1Q8NBF1 620 aa15.66■□□□□ 0.1
SCLT1-209ENST00000511426 TSEN2Q8NCE0 465 aaKnown RBP15.66■□□□□ 0.1
SCLT1-209ENST00000511426 SPPL3Q8TCT6 385 aa15.66■□□□□ 0.1
SCLT1-209ENST00000511426 AUTS2Q8WXX7 1259 aa15.66■□□□□ 0.1
SCLT1-209ENST00000511426 SPATA13Q96N96 652 aa15.66■□□□□ 0.1
SCLT1-209ENST00000511426 TSGA13Q96PP4 275 aa15.66■□□□□ 0.1
SCLT1-209ENST00000511426 NACA2Q9H009 215 aa15.66■□□□□ 0.1
SCLT1-209ENST00000511426 ATP8A1Q9Y2Q0 1164 aa15.66■□□□□ 0.1
SCLT1-209ENST00000511426 ZNF638Q14966 1978 aaKnown RBP15.65■□□□□ 0.1
SCLT1-209ENST00000511426 SOBPA7XYQ1 873 aa15.65■□□□□ 0.1
SCLT1-209ENST00000511426 ZSCAN5DPP0CG00 497 aa15.65■□□□□ 0.1
SCLT1-209ENST00000511426 SLC11A2P49281 568 aa15.65■□□□□ 0.1
SCLT1-209ENST00000511426 MS4A13Q5J8X5 152 aa15.65■□□□□ 0.1
SCLT1-209ENST00000511426 ELMSAN1Q6PJG2 1045 aa15.65■□□□□ 0.1
SCLT1-209ENST00000511426 MIB1Q86YT6 1006 aa15.65■□□□□ 0.1
SCLT1-209ENST00000511426 POF1BQ8WVV4 589 aa15.65■□□□□ 0.1
SCLT1-209ENST00000511426 PRCCQ92733 491 aaPredicted RBP15.65■□□□□ 0.1
SCLT1-209ENST00000511426 DPF3Q92784 378 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms