RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 AIPL1Q9NZN9 384 aa14.47□□□□□ -0.09
DDX41-212ENST00000511040 VPS13AQ96RL7 3174 aa14.47□□□□□ -0.09
DDX41-212ENST00000511040 TCRBV21S2A2A0A5A6 115 aa14.46□□□□□ -0.09
DDX41-212ENST00000511040 TYW5A2RUC4 315 aaKnown RBP14.46□□□□□ -0.09
DDX41-212ENST00000511040 F5H5T6 163 aa14.46□□□□□ -0.09
DDX41-212ENST00000511040 CALB1P05937 261 aa14.46□□□□□ -0.09
DDX41-212ENST00000511040 PABPC1P11940 636 aaKnown RBP14.46□□□□□ -0.09
DDX41-212ENST00000511040 HOXB2P14652 356 aa14.46□□□□□ -0.09
DDX41-212ENST00000511040 NTSR1P30989 418 aa14.46□□□□□ -0.09
DDX41-212ENST00000511040 CXCR3P49682 368 aa14.46□□□□□ -0.09
DDX41-212ENST00000511040 NUMBP49757 651 aa14.46□□□□□ -0.09
DDX41-212ENST00000511040 IRAK1P51617 712 aa14.46□□□□□ -0.09
DDX41-212ENST00000511040 DGKEP52429 567 aa14.46□□□□□ -0.09
DDX41-212ENST00000511040 KLHL30Q0D2K2 578 aa14.46□□□□□ -0.09
DDX41-212ENST00000511040 SIM2Q14190 667 aaPredicted RBP14.46□□□□□ -0.09
DDX41-212ENST00000511040 CDO1Q16878 200 aa14.46□□□□□ -0.09
DDX41-212ENST00000511040 C15orf59Q2T9L4 293 aaPredicted RBP14.46□□□□□ -0.09
DDX41-212ENST00000511040 FIGNQ5HY92 759 aa14.46□□□□□ -0.09
DDX41-212ENST00000511040 MPP7Q5T2T1 576 aa14.46□□□□□ -0.09
DDX41-212ENST00000511040 SDE2Q6IQ49 451 aa14.46□□□□□ -0.09
DDX41-212ENST00000511040 ACAD10Q6JQN1 1059 aa14.46□□□□□ -0.09
DDX41-212ENST00000511040 KIAA1211LQ6NV74 962 aa14.46□□□□□ -0.09
DDX41-212ENST00000511040 CEP68Q76N32 757 aa14.46□□□□□ -0.09
DDX41-212ENST00000511040 SND1Q7KZF4 910 aaKnown RBP eCLIP14.46□□□□□ -0.09
DDX41-212ENST00000511040 CHST9Q7L1S5 443 aa14.46□□□□□ -0.09
DDX41-212ENST00000511040 TRMT11Q7Z4G4 463 aaKnown RBP14.46□□□□□ -0.09
DDX41-212ENST00000511040 C14orf80Q86SX3 495 aa14.46□□□□□ -0.09
DDX41-212ENST00000511040 MFN1Q8IWA4 741 aa14.46□□□□□ -0.09
DDX41-212ENST00000511040 SUMF1Q8NBK3 374 aa14.46□□□□□ -0.09
DDX41-212ENST00000511040 MDGA1Q8NFP4 955 aa14.46□□□□□ -0.09
DDX41-212ENST00000511040 KCNV2Q8TDN2 545 aa14.46□□□□□ -0.09
DDX41-212ENST00000511040 CYB5D2Q8WUJ1 264 aa14.46□□□□□ -0.09
DDX41-212ENST00000511040 HMGB4Q8WW32 186 aa14.46□□□□□ -0.09
DDX41-212ENST00000511040 RXFP2Q8WXD0 754 aa14.46□□□□□ -0.09
DDX41-212ENST00000511040 NT5C3BQ969T7 300 aa14.46□□□□□ -0.09
DDX41-212ENST00000511040 SELENOOQ9BVL4 669 aa14.46□□□□□ -0.09
DDX41-212ENST00000511040 EDEM3Q9BZQ6 932 aa14.46□□□□□ -0.09
DDX41-212ENST00000511040 TKTL2Q9H0I9 626 aa14.46□□□□□ -0.09
DDX41-212ENST00000511040 SEMA4AQ9H3S1 761 aa14.46□□□□□ -0.09
DDX41-212ENST00000511040 ELOVL2Q9NXB9 296 aa14.46□□□□□ -0.09
DDX41-212ENST00000511040 GGA2Q9UJY4 613 aa14.46□□□□□ -0.09
DDX41-212ENST00000511040 SMG5Q9UPR3 1016 aaKnown RBP14.46□□□□□ -0.09
DDX41-212ENST00000511040 HS3ST4Q9Y661 456 aa14.46□□□□□ -0.09
DDX41-212ENST00000511040 STON1Q9Y6Q2 735 aa14.46□□□□□ -0.09
DDX41-212ENST00000511040 A0A1W2PQF6 199 aa14.45□□□□□ -0.1
DDX41-212ENST00000511040 I6L893 689 aaPredicted RBP14.45□□□□□ -0.1
DDX41-212ENST00000511040 DCLK1O15075 740 aa14.45□□□□□ -0.1
DDX41-212ENST00000511040 LUC7L3O95232 432 aaKnown RBP14.45□□□□□ -0.1
DDX41-212ENST00000511040 KRT3P12035 628 aa14.45□□□□□ -0.1
DDX41-212ENST00000511040 PDGFRAP16234 1089 aa14.45□□□□□ -0.1
DDX41-212ENST00000511040 HOXD11P31277 338 aaPredicted RBP14.45□□□□□ -0.1
DDX41-212ENST00000511040 C1QBPQ07021 282 aaKnown RBP14.45□□□□□ -0.1
DDX41-212ENST00000511040 LMAN2Q12907 356 aa14.45□□□□□ -0.1
DDX41-212ENST00000511040 CDH18Q13634 790 aa14.45□□□□□ -0.1
DDX41-212ENST00000511040 AUHQ13825 339 aaKnown RBP14.45□□□□□ -0.1
DDX41-212ENST00000511040 FUT11Q495W5 492 aa14.45□□□□□ -0.1
DDX41-212ENST00000511040 CCDC14Q49A88 953 aa14.45□□□□□ -0.1
DDX41-212ENST00000511040 FSCBQ5H9T9 825 aa14.45□□□□□ -0.1
DDX41-212ENST00000511040 SH3PXD2AQ5TCZ1 1133 aa14.45□□□□□ -0.1
DDX41-212ENST00000511040 RNF43Q68DV7 783 aa14.45□□□□□ -0.1
DDX41-212ENST00000511040 FBXL22Q6P050 247 aa14.45□□□□□ -0.1
DDX41-212ENST00000511040 DNAJC24Q6P3W2 148 aa14.45□□□□□ -0.1
DDX41-212ENST00000511040 ADIPOR2Q86V24 386 aa14.45□□□□□ -0.1
DDX41-212ENST00000511040 FAM131BQ86XD5 332 aa14.45□□□□□ -0.1
DDX41-212ENST00000511040 MCOLN2Q8IZK6 566 aa14.45□□□□□ -0.1
DDX41-212ENST00000511040 PGBD3Q8N328 593 aa14.45□□□□□ -0.1
DDX41-212ENST00000511040 UCMAQ8WVF2 138 aa14.45□□□□□ -0.1
DDX41-212ENST00000511040 IGSF8Q969P0 613 aa14.45□□□□□ -0.1
DDX41-212ENST00000511040 EPC1Q9H2F5 836 aa14.45□□□□□ -0.1
DDX41-212ENST00000511040 WDCPQ9H6R7 721 aa14.45□□□□□ -0.1
DDX41-212ENST00000511040 POLMQ9NP87 494 aaPredicted RBP14.45□□□□□ -0.1
DDX41-212ENST00000511040 ARHGEF38Q9NXL2 777 aa14.45□□□□□ -0.1
DDX41-212ENST00000511040 BCCIPQ9P287 314 aaKnown RBP eCLIP14.45□□□□□ -0.1
DDX41-212ENST00000511040 VANGL2Q9ULK5 521 aa14.45□□□□□ -0.1
DDX41-212ENST00000511040 A0A1W2PQJ5 194 aa14.44□□□□□ -0.1
DDX41-212ENST00000511040 C2CD4BA6NLJ0 364 aa14.44□□□□□ -0.1
DDX41-212ENST00000511040 H0Y626 953 aa14.44□□□□□ -0.1
DDX41-212ENST00000511040 DDX3XO00571 662 aaKnown RBP eCLIP14.44□□□□□ -0.1
DDX41-212ENST00000511040 ATMINO43313 823 aaPredicted RBP14.44□□□□□ -0.1
DDX41-212ENST00000511040 RPP40O75818 363 aaKnown RBP14.44□□□□□ -0.1
DDX41-212ENST00000511040 ALDH1A2O94788 518 aa14.44□□□□□ -0.1
DDX41-212ENST00000511040 F9P00740 461 aa14.44□□□□□ -0.1
DDX41-212ENST00000511040 GYPCP04921 128 aa14.44□□□□□ -0.1
DDX41-212ENST00000511040 RRM1P23921 792 aa14.44□□□□□ -0.1
DDX41-212ENST00000511040 PRKCHP24723 683 aa14.44□□□□□ -0.1
DDX41-212ENST00000511040 SDC4P31431 198 aa14.44□□□□□ -0.1
DDX41-212ENST00000511040 RDXP35241 583 aaKnown RBP14.44□□□□□ -0.1
DDX41-212ENST00000511040 RFC1P35251 1148 aaPredicted RBP14.44□□□□□ -0.1
DDX41-212ENST00000511040 PRKCIP41743 596 aa14.44□□□□□ -0.1
DDX41-212ENST00000511040 IL12RB1P42701 662 aa14.44□□□□□ -0.1
DDX41-212ENST00000511040 ZNF234Q14588 700 aa14.44□□□□□ -0.1
DDX41-212ENST00000511040 BRMS1LQ5PSV4 323 aa14.44□□□□□ -0.1
DDX41-212ENST00000511040 MBLAC2Q68D91 279 aa14.44□□□□□ -0.1
DDX41-212ENST00000511040 RASSF3Q86WH2 238 aa14.44□□□□□ -0.1
DDX41-212ENST00000511040 CCDC117Q8IWD4 279 aaPredicted RBP14.44□□□□□ -0.1
DDX41-212ENST00000511040 AHI1Q8N157 1196 aa14.44□□□□□ -0.1
DDX41-212ENST00000511040 DCLK2Q8N568 766 aa14.44□□□□□ -0.1
DDX41-212ENST00000511040 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.44□□□□□ -0.1
DDX41-212ENST00000511040 C3orf20Q8ND61 904 aa14.44□□□□□ -0.1
DDX41-212ENST00000511040 FIBINQ8TAL6 211 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms