RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 LRRC4Q9HBW1 653 aa16.58■□□□□ 0.24
RAB40C-202ENST00000509637 XPO7Q9UIA9 1087 aaKnown RBP16.58■□□□□ 0.24
RAB40C-202ENST00000509637 ANKRD6Q9Y2G4 727 aa16.58■□□□□ 0.24
RAB40C-202ENST00000509637 RAXQ9Y2V3 346 aa16.58■□□□□ 0.24
RAB40C-202ENST00000509637 KNTC1P50748 2209 aa16.57■□□□□ 0.24
RAB40C-202ENST00000509637 GOLGA8CPA6NN73 597 aa16.57■□□□□ 0.24
RAB40C-202ENST00000509637 HSP90AA1P07900 732 aaKnown RBP16.57■□□□□ 0.24
RAB40C-202ENST00000509637 ACADMP11310 421 aa16.57■□□□□ 0.24
RAB40C-202ENST00000509637 VDRP11473 427 aa16.57■□□□□ 0.24
RAB40C-202ENST00000509637 CD19P15391 556 aa16.57■□□□□ 0.24
RAB40C-202ENST00000509637 CTSOP43234 321 aaPredicted RBP16.57■□□□□ 0.24
RAB40C-202ENST00000509637 RPS24P62847 133 aaKnown RBP16.57■□□□□ 0.24
RAB40C-202ENST00000509637 KRT85P78386 507 aa16.57■□□□□ 0.24
RAB40C-202ENST00000509637 KCNJ12Q14500 433 aa16.57■□□□□ 0.24
RAB40C-202ENST00000509637 SHBQ15464 509 aa16.57■□□□□ 0.24
RAB40C-202ENST00000509637 SCML4Q8N228 414 aa16.57■□□□□ 0.24
RAB40C-202ENST00000509637 CCDC150Q8NCX0 1101 aa16.57■□□□□ 0.24
RAB40C-202ENST00000509637 RHBDD1Q8TEB9 315 aa16.57■□□□□ 0.24
RAB40C-202ENST00000509637 SNX19Q92543 992 aa16.57■□□□□ 0.24
RAB40C-202ENST00000509637 CRELD1Q96HD1 420 aa16.57■□□□□ 0.24
RAB40C-202ENST00000509637 PCDHGB2Q9Y5G2 931 aa16.57■□□□□ 0.24
RAB40C-202ENST00000509637 LAMA5O15230 3695 aa16.57■□□□□ 0.24
RAB40C-202ENST00000509637 DOCK9Q9BZ29 2069 aa16.57■□□□□ 0.24
RAB40C-202ENST00000509637 CBX4O00257 560 aa16.56■□□□□ 0.24
RAB40C-202ENST00000509637 CETN3O15182 167 aa16.56■□□□□ 0.24
RAB40C-202ENST00000509637 TBL1XO60907 577 aa16.56■□□□□ 0.24
RAB40C-202ENST00000509637 SEMA4FO95754 770 aa16.56■□□□□ 0.24
RAB40C-202ENST00000509637 CER1O95813 267 aa16.56■□□□□ 0.24
RAB40C-202ENST00000509637 DLDP09622 509 aaKnown RBP16.56■□□□□ 0.24
RAB40C-202ENST00000509637 EPB41P11171 864 aaKnown RBP16.56■□□□□ 0.24
RAB40C-202ENST00000509637 CD44P16070 742 aaKnown RBP16.56■□□□□ 0.24
RAB40C-202ENST00000509637 TRIM21P19474 475 aaKnown RBP16.56■□□□□ 0.24
RAB40C-202ENST00000509637 BRD2P25440 801 aaKnown RBP16.56■□□□□ 0.24
RAB40C-202ENST00000509637 CTSKP43235 329 aa16.56■□□□□ 0.24
RAB40C-202ENST00000509637 HARS2P49590 506 aaKnown RBP16.56■□□□□ 0.24
RAB40C-202ENST00000509637 IL9RQ01113 521 aa16.56■□□□□ 0.24
RAB40C-202ENST00000509637 DCAF17Q5H9S7 520 aaPredicted RBP16.56■□□□□ 0.24
RAB40C-202ENST00000509637 TCERG1LQ5VWI1 586 aa16.56■□□□□ 0.24
RAB40C-202ENST00000509637 LCLAT1Q6UWP7 414 aa16.56■□□□□ 0.24
RAB40C-202ENST00000509637 FMR1NBQ8N0W7 255 aaPredicted RBP16.56■□□□□ 0.24
RAB40C-202ENST00000509637 WFIKKN2Q8TEU8 576 aa16.56■□□□□ 0.24
RAB40C-202ENST00000509637 HNRNPLLQ8WVV9 542 aaKnown RBP16.56■□□□□ 0.24
RAB40C-202ENST00000509637 FCRL2Q96LA5 508 aaPredicted RBP16.56■□□□□ 0.24
RAB40C-202ENST00000509637 PCED1AQ9H1Q7 454 aa16.56■□□□□ 0.24
RAB40C-202ENST00000509637 CCDC86Q9H6F5 360 aaKnown RBP16.56■□□□□ 0.24
RAB40C-202ENST00000509637 ABCC13Q9NSE7 274 aa16.56■□□□□ 0.24
RAB40C-202ENST00000509637 OLA1Q9NTK5 396 aaKnown RBP16.56■□□□□ 0.24
RAB40C-202ENST00000509637 STIM2Q9P246 746 aa16.56■□□□□ 0.24
RAB40C-202ENST00000509637 APOBEC2Q9Y235 224 aaKnown RBP16.56■□□□□ 0.24
RAB40C-202ENST00000509637 TP53BP1Q12888 1972 aaPredicted RBP16.55■□□□□ 0.24
RAB40C-202ENST00000509637 ACSL4O60488 711 aa16.55■□□□□ 0.24
RAB40C-202ENST00000509637 SIN3BO75182 1162 aa16.55■□□□□ 0.24
RAB40C-202ENST00000509637 FSBPO95073 299 aa16.55■□□□□ 0.24
RAB40C-202ENST00000509637 RDXP35241 583 aaKnown RBP16.55■□□□□ 0.24
RAB40C-202ENST00000509637 NUMBP49757 651 aa16.55■□□□□ 0.24
RAB40C-202ENST00000509637 PDZD3Q86UT5 571 aa16.55■□□□□ 0.24
RAB40C-202ENST00000509637 TTC39CQ8N584 583 aa16.55■□□□□ 0.24
RAB40C-202ENST00000509637 ENGASEQ8NFI3 743 aa16.55■□□□□ 0.24
RAB40C-202ENST00000509637 SPATA20Q8TB22 786 aa16.55■□□□□ 0.24
RAB40C-202ENST00000509637 RNF139Q8WU17 664 aa16.55■□□□□ 0.24
RAB40C-202ENST00000509637 TTC17Q96AE7 1141 aa16.55■□□□□ 0.24
RAB40C-202ENST00000509637 NUCKS1Q9H1E3 243 aaKnown RBP16.55■□□□□ 0.24
RAB40C-202ENST00000509637 RSPH9Q9H1X1 276 aaPredicted RBP16.55■□□□□ 0.24
RAB40C-202ENST00000509637 OSGEPQ9NPF4 335 aa16.55■□□□□ 0.24
RAB40C-202ENST00000509637 CNGB3Q9NQW8 809 aa16.55■□□□□ 0.24
RAB40C-202ENST00000509637 ITPR1Q14643 2758 aa16.55■□□□□ 0.24
RAB40C-202ENST00000509637 ARID1BQ8NFD5 2236 aaPredicted RBP16.55■□□□□ 0.24
RAB40C-202ENST00000509637 LOC400499M0QZD8 3231 aa16.54■□□□□ 0.24
RAB40C-202ENST00000509637 TRABD2BA6NFA1 517 aa16.54■□□□□ 0.24
RAB40C-202ENST00000509637 FLRT2O43155 660 aa16.54■□□□□ 0.24
RAB40C-202ENST00000509637 LATS1O95835 1130 aa16.54■□□□□ 0.24
RAB40C-202ENST00000509637 CD27P26842 260 aa16.54■□□□□ 0.24
RAB40C-202ENST00000509637 AFF3P51826 1226 aaKnown RBP16.54■□□□□ 0.24
RAB40C-202ENST00000509637 METAP1P53582 386 aa16.54■□□□□ 0.24
RAB40C-202ENST00000509637 GALCP54803 685 aa16.54■□□□□ 0.24
RAB40C-202ENST00000509637 PITX1P78337 314 aaPredicted RBP16.54■□□□□ 0.24
RAB40C-202ENST00000509637 CYP4F3Q08477 520 aa16.54■□□□□ 0.24
RAB40C-202ENST00000509637 COBLL1Q53SF7 1204 aa16.54■□□□□ 0.24
RAB40C-202ENST00000509637 C9orf64Q5T6V5 341 aa16.54■□□□□ 0.24
RAB40C-202ENST00000509637 SYPL2Q5VXT5 272 aa16.54■□□□□ 0.24
RAB40C-202ENST00000509637 TMEM270Q6UE05 265 aa16.54■□□□□ 0.24
RAB40C-202ENST00000509637 ARHGEF19Q8IW93 802 aa16.54■□□□□ 0.24
RAB40C-202ENST00000509637 AHI1Q8N157 1196 aa16.54■□□□□ 0.24
RAB40C-202ENST00000509637 CFAP52Q8N1V2 620 aa16.54■□□□□ 0.24
RAB40C-202ENST00000509637 FIBINQ8TAL6 211 aa16.54■□□□□ 0.24
RAB40C-202ENST00000509637 CCDC47Q96A33 483 aaKnown RBP16.54■□□□□ 0.24
RAB40C-202ENST00000509637 SLC39A13Q96H72 371 aa16.54■□□□□ 0.24
RAB40C-202ENST00000509637 SLC6A18Q96N87 628 aa16.54■□□□□ 0.24
RAB40C-202ENST00000509637 IPO9Q96P70 1041 aaKnown RBP16.54■□□□□ 0.24
RAB40C-202ENST00000509637 FAM129BQ96TA1 746 aa16.54■□□□□ 0.24
RAB40C-202ENST00000509637 BTBD1Q9H0C5 482 aa16.54■□□□□ 0.24
RAB40C-202ENST00000509637 NEUROG2Q9H2A3 272 aa16.54■□□□□ 0.24
RAB40C-202ENST00000509637 CAAP1Q9H8G2 361 aa16.54■□□□□ 0.24
RAB40C-202ENST00000509637 SLCO3A1Q9UIG8 710 aa16.54■□□□□ 0.24
RAB40C-202ENST00000509637 PLA2G4CQ9UP65 541 aa16.54■□□□□ 0.24
RAB40C-202ENST00000509637 NAALADL1Q9UQQ1 740 aa16.54■□□□□ 0.24
RAB40C-202ENST00000509637 TTC34A8MYJ7 566 aa16.53■□□□□ 0.24
RAB40C-202ENST00000509637 LTFP02788 710 aa16.53■□□□□ 0.24
RAB40C-202ENST00000509637 SETSIPP0DME0 302 aa16.53■□□□□ 0.24
RAB40C-202ENST00000509637 CSKP41240 450 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms