RNA–Protein interactions for RNA: ENST00000509368.6

PDE4D-218, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-218ENST00000509368 LINC00310P59036 64 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 NLRP5P59047 1200 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 MYO1EQ12965 1108 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 SMC1AQ14683 1233 aaKnown RBP2.42□□□□□ -2.02
PDE4D-218ENST00000509368 HLXQ14774 488 aaPredicted RBP2.42□□□□□ -2.02
PDE4D-218ENST00000509368 NTRK2Q16620 822 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 ZNF568Q3ZCX4 644 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 CACHD1Q5VU97 1274 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 EFCAB12Q6NXP0 572 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 TMEM88Q6PEY1 159 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 LARP4Q71RC2 724 aaKnown RBP eCLIP2.42□□□□□ -2.02
PDE4D-218ENST00000509368 RRAGAQ7L523 313 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 GALNTL5Q7Z4T8 443 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 RALYLQ86SE5 291 aaKnown RBP2.42□□□□□ -2.02
PDE4D-218ENST00000509368 SCN4BQ8IWT1 228 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 CFAP52Q8N1V2 620 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 FAM71DQ8N9W8 422 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 PCSK9Q8NBP7 692 aaKnown RBP2.42□□□□□ -2.02
PDE4D-218ENST00000509368 PDPRQ8NCN5 879 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 MSANTD4Q8NCY6 345 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 GSDMBQ8TAX9 411 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 RAPGEF4Q8WZA2 1011 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 FAM162AQ96A26 154 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 MASTLQ96GX5 879 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 TCF25Q9BQ70 676 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 VKORC1Q9BQB6 163 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 PHF7Q9BWX1 381 aaPredicted RBP2.42□□□□□ -2.02
PDE4D-218ENST00000509368 L2HGDHQ9H9P8 463 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 ATP8A2Q9NTI2 1148 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 GIMAP4Q9NUV9 329 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 ADD3Q9UEY8 706 aaKnown RBP2.42□□□□□ -2.02
PDE4D-218ENST00000509368 RPS6KA6Q9UK32 745 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 PIK3R4Q99570 1358 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.42□□□□□ -2.02
PDE4D-218ENST00000509368 NPHP4O75161 1426 aaPredicted RBP2.42□□□□□ -2.02
PDE4D-218ENST00000509368 CASKIN1Q8WXD9 1431 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 MIA2Q96PC5 1412 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 A2MP01023 1474 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 CHD2O14647 1828 aaKnown RBP2.42□□□□□ -2.02
PDE4D-218ENST00000509368 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 GTPBP10A4D1E9 387 aaKnown RBP2.42□□□□□ -2.02
PDE4D-218ENST00000509368 SH2D7A6NKC9 451 aaPredicted RBP2.42□□□□□ -2.02
PDE4D-218ENST00000509368 PRR5-ARHGAP8B1AHC4 643 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 GCOM1H8Y6P7 765 aaPredicted RBP2.42□□□□□ -2.02
PDE4D-218ENST00000509368 SH2B2O14492 632 aaPredicted RBP2.42□□□□□ -2.02
PDE4D-218ENST00000509368 TNPO2O14787 897 aaKnown RBP2.42□□□□□ -2.02
PDE4D-218ENST00000509368 DHX16O60231 1041 aaKnown RBP2.42□□□□□ -2.02
PDE4D-218ENST00000509368 KRT38O76015 456 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 RASAL1O95294 804 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 C1SP09871 688 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 ZNF888P0CJ79 500 aaPredicted RBP2.42□□□□□ -2.02
PDE4D-218ENST00000509368 ZNF8P17098 575 aaPredicted RBP2.42□□□□□ -2.02
PDE4D-218ENST00000509368 HK1P19367 917 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 ITGALP20701 1170 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 MUTP22033 750 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 HOXA13P31271 388 aaPredicted RBP2.42□□□□□ -2.02
PDE4D-218ENST00000509368 GSTM5P46439 218 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 GABRB2P47870 512 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 PXNP49023 591 aaPredicted RBP2.42□□□□□ -2.02
PDE4D-218ENST00000509368 LMAN1P49257 510 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 GATMP50440 423 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 ZNF41P51814 821 aaPredicted RBP2.42□□□□□ -2.02
PDE4D-218ENST00000509368 PGDP52209 483 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 RBP5P82980 135 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 EIF2B5Q13144 721 aaKnown RBP2.42□□□□□ -2.02
PDE4D-218ENST00000509368 KCNJ12Q14500 433 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 TBCEQ15813 527 aaPredicted RBP2.42□□□□□ -2.02
PDE4D-218ENST00000509368 KCNA10Q16322 511 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 NFIL3Q16649 462 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 KYNUQ16719 465 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 BTBD16Q32M84 506 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 DCAF17Q5H9S7 520 aaPredicted RBP2.42□□□□□ -2.02
PDE4D-218ENST00000509368 ZNF484Q5JVG2 852 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 FAM69AQ5T7M9 428 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 KRT80Q6KB66 452 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 CCDC144NLQ6NUI1 221 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 MSANTD2Q6P1R3 559 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 PLBD1Q6P4A8 553 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 PARS2Q7L3T8 475 aaKnown RBP2.42□□□□□ -2.02
PDE4D-218ENST00000509368 TMPRSS9Q7Z410 1059 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 UBE2Q1Q7Z7E8 422 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 GALNT13Q8IUC8 556 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 LRRC56Q8IYG6 542 aaPredicted RBP2.42□□□□□ -2.02
PDE4D-218ENST00000509368 CEP57L1Q8IYX8 460 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 NDUFAF2Q8N183 169 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 GALNT4Q8N4A0 578 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 TTC39CQ8N584 583 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 TEX9Q8N6V9 391 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 NUDT10Q8NFP7 164 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 NUDT11Q96G61 164 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 REXO5Q96IC2 774 aaKnown RBP2.42□□□□□ -2.02
PDE4D-218ENST00000509368 RAB3IPQ96QF0 476 aaPredicted RBP2.42□□□□□ -2.02
PDE4D-218ENST00000509368 TRIB1Q96RU8 372 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 YME1L1Q96TA2 773 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 MPHOSPH9Q99550 1183 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 IMPG2Q9BZV3 1241 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 TMEM168Q9H0V1 697 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 SEPT11Q9NVA2 429 aaKnown RBP2.42□□□□□ -2.02
PDE4D-218ENST00000509368 RASAL2Q9UJF2 1139 aa2.42□□□□□ -2.02
PDE4D-218ENST00000509368 HDAC5Q9UQL6 1122 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms