RNA–Protein interactions for RNA: ENST00000509346.5

GYPA-206, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 5

Gene GYPA, Length 383 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-206ENST00000509346 ADRA1DP25100 572 aa3.08□□□□□ -1.92
GYPA-206ENST00000509346 PSMC2P35998 433 aaKnown RBP3.08□□□□□ -1.92
GYPA-206ENST00000509346 FAM3BP58499 235 aaPredicted RBP3.08□□□□□ -1.92
GYPA-206ENST00000509346 RBM6P78332 1123 aaKnown RBP3.08□□□□□ -1.92
GYPA-206ENST00000509346 TLE3Q04726 772 aa3.08□□□□□ -1.92
GYPA-206ENST00000509346 DNASE1L3Q13609 305 aa3.08□□□□□ -1.92
GYPA-206ENST00000509346 DLGAP5Q15398 846 aa3.08□□□□□ -1.92
GYPA-206ENST00000509346 BAK1Q16611 211 aa3.08□□□□□ -1.92
GYPA-206ENST00000509346 FAM187BQ17R55 369 aa3.08□□□□□ -1.92
GYPA-206ENST00000509346 AKNAD1Q5T1N1 836 aa3.08□□□□□ -1.92
GYPA-206ENST00000509346 TSTD2Q5T7W7 516 aa3.08□□□□□ -1.92
GYPA-206ENST00000509346 C11orf87Q6NUJ2 197 aa3.08□□□□□ -1.92
GYPA-206ENST00000509346 ACSM6Q6P461 480 aa3.08□□□□□ -1.92
GYPA-206ENST00000509346 MTHFD1LQ6UB35 978 aa3.08□□□□□ -1.92
GYPA-206ENST00000509346 SYT13Q7L8C5 426 aa3.08□□□□□ -1.92
GYPA-206ENST00000509346 AMIGO2Q86SJ2 522 aa3.08□□□□□ -1.92
GYPA-206ENST00000509346 ZNF366Q8N895 744 aa3.08□□□□□ -1.92
GYPA-206ENST00000509346 C11orf44Q8N8P7 122 aa3.08□□□□□ -1.92
GYPA-206ENST00000509346 PNPLA1Q8N8W4 532 aa3.08□□□□□ -1.92
GYPA-206ENST00000509346 GLMPQ8WWB7 406 aa3.08□□□□□ -1.92
GYPA-206ENST00000509346 ST8SIA4Q92187 359 aa3.08□□□□□ -1.92
GYPA-206ENST00000509346 CENPIQ92674 756 aaPredicted RBP3.08□□□□□ -1.92
GYPA-206ENST00000509346 HDAC2Q92769 488 aaKnown RBP3.08□□□□□ -1.92
GYPA-206ENST00000509346 GOLGA1Q92805 767 aa3.08□□□□□ -1.92
GYPA-206ENST00000509346 ZBTB10Q96DT7 871 aa3.08□□□□□ -1.92
GYPA-206ENST00000509346 FBXL20Q96IG2 436 aa3.08□□□□□ -1.92
GYPA-206ENST00000509346 C7orf26Q96N11 449 aa3.08□□□□□ -1.92
GYPA-206ENST00000509346 PRR25Q96S07 402 aa3.08□□□□□ -1.92
GYPA-206ENST00000509346 SLC29A3Q9BZD2 475 aa3.08□□□□□ -1.92
GYPA-206ENST00000509346 BRD8Q9H0E9 1235 aa3.08□□□□□ -1.92
GYPA-206ENST00000509346 CHODLQ9H9P2 273 aa3.08□□□□□ -1.92
GYPA-206ENST00000509346 KLC4Q9NSK0 619 aa3.08□□□□□ -1.92
GYPA-206ENST00000509346 FBXO28Q9NVF7 368 aa3.08□□□□□ -1.92
GYPA-206ENST00000509346 EHD3Q9NZN3 535 aa3.08□□□□□ -1.92
GYPA-206ENST00000509346 FBXO2Q9UK22 296 aaPredicted RBP3.08□□□□□ -1.92
GYPA-206ENST00000509346 STX16-NPEPL1H3BU86 382 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 M0QYT0 321 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 STX16O14662 325 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 KRT38O76015 456 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 FESP07332 822 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 CSF1P09603 554 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 HNRNPA1P09651 372 aaKnown RBP eCLIP3.07□□□□□ -1.92
GYPA-206ENST00000509346 ATP1A3P13637 1013 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 CTGFP29279 349 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 THBS4P35443 961 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 PNPLA4P41247 253 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 CLCN2P51788 898 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 TPTEP56180 551 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 FOXL2P58012 376 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 RPL15P61313 204 aaKnown RBP3.07□□□□□ -1.92
GYPA-206ENST00000509346 SUMO2P61956 95 aaKnown RBP3.07□□□□□ -1.92
GYPA-206ENST00000509346 DCAF7P61962 342 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 FOXD4Q12950 439 aaPredicted RBP3.07□□□□□ -1.92
GYPA-206ENST00000509346 EIF2B5Q13144 721 aaKnown RBP3.07□□□□□ -1.92
GYPA-206ENST00000509346 SEMA3BQ13214 749 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 TBCCQ15814 346 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 PRICKLE4Q2TBC4 344 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 ZNF484Q5JVG2 852 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 WDR45BQ5MNZ6 344 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 TREML2Q5T2D2 321 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 C16orf89Q6UX73 402 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 ZNF782Q6ZMW2 699 aaPredicted RBP3.07□□□□□ -1.92
GYPA-206ENST00000509346 PTCHD4Q6ZW05 846 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 NEK10Q6ZWH5 1172 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 BRINP3Q76B58 766 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 KRT27Q7Z3Y8 459 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 TICAM2Q86XR7 235 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 LINC01465Q8N7H1 131 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 SEMA6DQ8NFY4 1073 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 OR52L2PQ8NGH6 319 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 ADAMTS15Q8TE58 950 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 ADAMTS18Q8TE60 1221 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 R3HDM4Q96D70 268 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 RRP36Q96EU6 259 aaKnown RBP3.07□□□□□ -1.92
GYPA-206ENST00000509346 TRMT61AQ96FX7 289 aaKnown RBP3.07□□□□□ -1.92
GYPA-206ENST00000509346 REXO5Q96IC2 774 aaKnown RBP3.07□□□□□ -1.92
GYPA-206ENST00000509346 VPS50Q96JG6 964 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 PIGSQ96S52 555 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 TREX2Q9BQ50 279 aaPredicted RBP3.07□□□□□ -1.92
GYPA-206ENST00000509346 RNF26Q9BY78 433 aaPredicted RBP3.07□□□□□ -1.92
GYPA-206ENST00000509346 KRTAP2-2Q9BYT5 123 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 ARHGAP39Q9C0H5 1083 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 CDCP1Q9H5V8 836 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 CCDC134Q9H6E4 229 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 PREBQ9HCU5 417 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 SMC4Q9NTJ3 1288 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 TBC1D22BQ9NU19 505 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 BLOC1S4Q9NUP1 217 aa3.07□□□□□ -1.92
GYPA-206ENST00000509346 CYP3A7-CYP3A51PA0A087WV96 503 aa3.06□□□□□ -1.92
GYPA-206ENST00000509346 CCDC187A0A096LP49 1063 aa3.06□□□□□ -1.92
GYPA-206ENST00000509346 ZNF804BA4D1E1 1349 aa3.06□□□□□ -1.92
GYPA-206ENST00000509346 C3orf70A6NLC5 250 aaPredicted RBP3.06□□□□□ -1.92
GYPA-206ENST00000509346 PRSS47A8MTI9 375 aa3.06□□□□□ -1.92
GYPA-206ENST00000509346 RNASEH2AO75792 299 aaKnown RBP3.06□□□□□ -1.92
GYPA-206ENST00000509346 MBPP02686 304 aaPredicted RBP3.06□□□□□ -1.92
GYPA-206ENST00000509346 DLDP09622 509 aaKnown RBP3.06□□□□□ -1.92
GYPA-206ENST00000509346 IFIT1P09914 478 aaKnown RBP3.06□□□□□ -1.92
GYPA-206ENST00000509346 TNNT1P13805 278 aa3.06□□□□□ -1.92
GYPA-206ENST00000509346 CYP3A7P24462 503 aa3.06□□□□□ -1.92
GYPA-206ENST00000509346 CCT4P50991 539 aaKnown RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms