RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 DPPA5A6NC42 116 aa2.46□□□□□ -2.02
XRCC4-204ENST00000509268 TTC34A8MYJ7 566 aa2.46□□□□□ -2.02
XRCC4-204ENST00000509268 SGPL1O95470 568 aa2.46□□□□□ -2.02
XRCC4-204ENST00000509268 MBPP02686 304 aaPredicted RBP2.46□□□□□ -2.02
XRCC4-204ENST00000509268 TRIM27P14373 513 aa2.46□□□□□ -2.02
XRCC4-204ENST00000509268 CD53P19397 219 aa2.46□□□□□ -2.02
XRCC4-204ENST00000509268 PGDP52209 483 aa2.46□□□□□ -2.02
XRCC4-204ENST00000509268 ABATP80404 500 aa2.46□□□□□ -2.02
XRCC4-204ENST00000509268 CTBP1Q13363 440 aa2.46□□□□□ -2.02
XRCC4-204ENST00000509268 DNASE1L3Q13609 305 aa2.46□□□□□ -2.02
XRCC4-204ENST00000509268 MORC3Q14149 939 aa2.46□□□□□ -2.02
XRCC4-204ENST00000509268 GALEQ14376 348 aa2.46□□□□□ -2.02
XRCC4-204ENST00000509268 ZRSR2Q15696 482 aaKnown RBP2.46□□□□□ -2.02
XRCC4-204ENST00000509268 GRAMD1BQ3KR37 738 aa2.46□□□□□ -2.02
XRCC4-204ENST00000509268 FAM83BQ5T0W9 1011 aa2.46□□□□□ -2.02
XRCC4-204ENST00000509268 SYDE2Q5VT97 1194 aa2.46□□□□□ -2.02
XRCC4-204ENST00000509268 OTUD1Q5VV17 481 aaPredicted RBP2.46□□□□□ -2.02
XRCC4-204ENST00000509268 ZNF783Q6ZMS7 281 aa2.46□□□□□ -2.02
XRCC4-204ENST00000509268 Q6ZTK2 550 aa2.46□□□□□ -2.02
XRCC4-204ENST00000509268 CTU1Q7Z7A3 348 aaKnown RBP2.46□□□□□ -2.02
XRCC4-204ENST00000509268 TPH2Q8IWU9 490 aa2.46□□□□□ -2.02
XRCC4-204ENST00000509268 DDIASQ8IXT1 998 aa2.46□□□□□ -2.02
XRCC4-204ENST00000509268 CLIP4Q8N3C7 705 aa2.46□□□□□ -2.02
XRCC4-204ENST00000509268 ARL14EPQ8N8R7 260 aaPredicted RBP2.46□□□□□ -2.02
XRCC4-204ENST00000509268 PPM1EQ8WY54 764 aa2.46□□□□□ -2.02
XRCC4-204ENST00000509268 CELF1Q92879 486 aaKnown RBP2.46□□□□□ -2.02
XRCC4-204ENST00000509268 ANKRD9Q96BM1 317 aaPredicted RBP2.46□□□□□ -2.02
XRCC4-204ENST00000509268 DUX3Q96PT4 197 aa2.46□□□□□ -2.02
XRCC4-204ENST00000509268 PKP4Q99569 1192 aa2.46□□□□□ -2.02
XRCC4-204ENST00000509268 ABHD16BQ9H3Z7 469 aa2.46□□□□□ -2.02
XRCC4-204ENST00000509268 ERVK-5Q9HDB9 667 aa2.46□□□□□ -2.02
XRCC4-204ENST00000509268 VPS45Q9NRW7 570 aa2.46□□□□□ -2.02
XRCC4-204ENST00000509268 DAAM1Q9Y4D1 1078 aa2.46□□□□□ -2.02
XRCC4-204ENST00000509268 A0A0U1RQG5 324 aaPredicted RBP2.45□□□□□ -2.02
XRCC4-204ENST00000509268 GOLGA6CA6NDK9 693 aa2.45□□□□□ -2.02
XRCC4-204ENST00000509268 GOLGA6BA6NDN3 693 aa2.45□□□□□ -2.02
XRCC4-204ENST00000509268 BECN2A8MW95 431 aa2.45□□□□□ -2.02
XRCC4-204ENST00000509268 CCP110O43303 1012 aa2.45□□□□□ -2.02
XRCC4-204ENST00000509268 RASAL1O95294 804 aa2.45□□□□□ -2.02
XRCC4-204ENST00000509268 IFIT2P09913 472 aaKnown RBP2.45□□□□□ -2.02
XRCC4-204ENST00000509268 GOLGA6DP0CG33 693 aa2.45□□□□□ -2.02
XRCC4-204ENST00000509268 ARSBP15848 533 aa2.45□□□□□ -2.02
XRCC4-204ENST00000509268 SERPINB3P29508 390 aa2.45□□□□□ -2.02
XRCC4-204ENST00000509268 HOXD12P35452 270 aa2.45□□□□□ -2.02
XRCC4-204ENST00000509268 HTR3AP46098 478 aa2.45□□□□□ -2.02
XRCC4-204ENST00000509268 VPS41P49754 854 aa2.45□□□□□ -2.02
XRCC4-204ENST00000509268 LMOD3Q0VAK6 560 aa2.45□□□□□ -2.02
XRCC4-204ENST00000509268 CLCA4Q14CN2 919 aa2.45□□□□□ -2.02
XRCC4-204ENST00000509268 SLC1A5Q15758 541 aa2.45□□□□□ -2.02
XRCC4-204ENST00000509268 ABCB5Q2M3G0 1257 aa2.45□□□□□ -2.02
XRCC4-204ENST00000509268 DNTTIP2Q5QJE6 756 aaKnown RBP2.45□□□□□ -2.02
XRCC4-204ENST00000509268 ZNF772Q68DY9 489 aaPredicted RBP2.45□□□□□ -2.02
XRCC4-204ENST00000509268 CXorf57Q6NSI4 855 aaKnown RBP2.45□□□□□ -2.02
XRCC4-204ENST00000509268 KRTAP5-5Q701N2 237 aaPredicted RBP2.45□□□□□ -2.02
XRCC4-204ENST00000509268 METTL25Q8N6Q8 603 aa2.45□□□□□ -2.02
XRCC4-204ENST00000509268 LMNTD1Q8N9Z9 388 aa2.45□□□□□ -2.02
XRCC4-204ENST00000509268 PJA1Q8NG27 643 aa2.45□□□□□ -2.02
XRCC4-204ENST00000509268 IGSF21Q96ID5 467 aa2.45□□□□□ -2.02
XRCC4-204ENST00000509268 ZNF668Q96K58 619 aaPredicted RBP2.45□□□□□ -2.02
XRCC4-204ENST00000509268 PPP1R9BQ96SB3 815 aa2.45□□□□□ -2.02
XRCC4-204ENST00000509268 EPYCQ99645 322 aa2.45□□□□□ -2.02
XRCC4-204ENST00000509268 SARGQ9BW04 601 aa2.45□□□□□ -2.02
XRCC4-204ENST00000509268 AAMDCQ9H7C9 122 aa2.45□□□□□ -2.02
XRCC4-204ENST00000509268 GOLGA6AQ9NYA3 693 aa2.45□□□□□ -2.02
XRCC4-204ENST00000509268 MAP3K20Q9NYL2 800 aaKnown RBP2.45□□□□□ -2.02
XRCC4-204ENST00000509268 IP6K2Q9UHH9 426 aa2.45□□□□□ -2.02
XRCC4-204ENST00000509268 FBXO9Q9UK97 447 aaPredicted RBP2.45□□□□□ -2.02
XRCC4-204ENST00000509268 RIMKLBQ9ULI2 386 aa2.45□□□□□ -2.02
XRCC4-204ENST00000509268 PAXBP1Q9Y5B6 917 aa2.45□□□□□ -2.02
XRCC4-204ENST00000509268 IGKV6D-41A0A0C4DH26 115 aa2.44□□□□□ -2.02
XRCC4-204ENST00000509268 A0A1W2PNU3 283 aaPredicted RBP2.44□□□□□ -2.02
XRCC4-204ENST00000509268 APAF1O14727 1248 aa2.44□□□□□ -2.02
XRCC4-204ENST00000509268 TBX3O15119 743 aa2.44□□□□□ -2.02
XRCC4-204ENST00000509268 LCATP04180 440 aa2.44□□□□□ -2.02
XRCC4-204ENST00000509268 PARP1P09874 1014 aaKnown RBP2.44□□□□□ -2.02
XRCC4-204ENST00000509268 DUSP1P28562 367 aa2.44□□□□□ -2.02
XRCC4-204ENST00000509268 TRAPPC10P48553 1259 aa2.44□□□□□ -2.02
XRCC4-204ENST00000509268 AGFG1P52594 562 aaKnown RBP2.44□□□□□ -2.02
XRCC4-204ENST00000509268 ARFIP2P53365 341 aa2.44□□□□□ -2.02
XRCC4-204ENST00000509268 EIF4A1P60842 406 aaKnown RBP2.44□□□□□ -2.02
XRCC4-204ENST00000509268 PGM5Q15124 567 aa2.44□□□□□ -2.02
XRCC4-204ENST00000509268 PGS1Q32NB8 556 aa2.44□□□□□ -2.02
XRCC4-204ENST00000509268 AASDHQ4L235 1098 aaPredicted RBP2.44□□□□□ -2.02
XRCC4-204ENST00000509268 CACHD1Q5VU97 1274 aa2.44□□□□□ -2.02
XRCC4-204ENST00000509268 CYB5RLQ6IPT4 315 aa2.44□□□□□ -2.02
XRCC4-204ENST00000509268 C8orf82Q6P1X6 216 aaPredicted RBP2.44□□□□□ -2.02
XRCC4-204ENST00000509268 RHBDF2Q6PJF5 856 aa2.44□□□□□ -2.02
XRCC4-204ENST00000509268 PCGF5Q86SE9 256 aa2.44□□□□□ -2.02
XRCC4-204ENST00000509268 CELF5Q8N6W0 485 aaKnown RBP2.44□□□□□ -2.02
XRCC4-204ENST00000509268 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.44□□□□□ -2.02
XRCC4-204ENST00000509268 MYRIPQ8NFW9 859 aa2.44□□□□□ -2.02
XRCC4-204ENST00000509268 GJA10Q969M2 543 aa2.44□□□□□ -2.02
XRCC4-204ENST00000509268 STRBPQ96SI9 672 aaKnown RBP2.44□□□□□ -2.02
XRCC4-204ENST00000509268 P2RX7Q99572 595 aaKnown RBP2.44□□□□□ -2.02
XRCC4-204ENST00000509268 NAP1L4Q99733 375 aaKnown RBP2.44□□□□□ -2.02
XRCC4-204ENST00000509268 DPH1Q9BZG8 443 aa2.44□□□□□ -2.02
XRCC4-204ENST00000509268 DDX20Q9UHI6 824 aaKnown RBP2.44□□□□□ -2.02
XRCC4-204ENST00000509268 CPA4Q9UI42 421 aa2.44□□□□□ -2.02
XRCC4-204ENST00000509268 LAMP3Q9UQV4 416 aa2.44□□□□□ -2.02
XRCC4-204ENST00000509268 LZTS1Q9Y250 596 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms