RNA–Protein interactions for RNA: ENST00000509013.2

SSBP2-211, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-211ENST00000509013 ITGA11Q9UKX5 1188 aa6.38□□□□□ -1.39
SSBP2-211ENST00000509013 PCOLCE2Q9UKZ9 415 aa6.38□□□□□ -1.39
SSBP2-211ENST00000509013 CDH9Q9ULB4 789 aa6.38□□□□□ -1.39
SSBP2-211ENST00000509013 JRKLQ9Y4A0 524 aa6.38□□□□□ -1.39
SSBP2-211ENST00000509013 BZW2Q9Y6E2 419 aaKnown RBP6.38□□□□□ -1.39
SSBP2-211ENST00000509013 MYH10P35580 1976 aa6.38□□□□□ -1.39
SSBP2-211ENST00000509013 ASH1LQ9NR48 2969 aaKnown RBP6.38□□□□□ -1.39
SSBP2-211ENST00000509013 FLNBO75369 2602 aaKnown RBP6.37□□□□□ -1.39
SSBP2-211ENST00000509013 ABCA7Q8IZY2 2146 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 CITO14578 2027 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 A0A087X0T9 212 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 A0A1B0GTW7 788 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 E2F8A0AVK6 867 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 F8VP50 259 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 TRIM24O15164 1050 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 BUB1O43683 1085 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 GFPT2O94808 682 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 OLFM2O95897 454 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 OAS1P00973 400 aaKnown RBP6.37□□□□□ -1.39
SSBP2-211ENST00000509013 PRB1P04280 392 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 TUBBP07437 444 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 PDGFRBP09619 1106 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 TMEM191BP0C7N4 346 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 FAM228BP0C875 321 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 TRIM49P0CI25 452 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 TRIM49CP0CI26 452 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 PNMA6AP0CW24 399 aaPredicted RBP6.37□□□□□ -1.39
SSBP2-211ENST00000509013 FERP16591 822 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 STAT1P42224 750 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 PAFAH1B1P43034 410 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 NOP2P46087 812 aaKnown RBP6.37□□□□□ -1.39
SSBP2-211ENST00000509013 FMO5P49326 533 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 VAMP7P51809 220 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 CETN1Q12798 172 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 IFRD2Q12894 506 aaPredicted RBP6.37□□□□□ -1.39
SSBP2-211ENST00000509013 SLC18A3Q16572 532 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 ANO4Q32M45 955 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 CCDC70Q6NSX1 233 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 GJB7Q6PEY0 223 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 MIB1Q86YT6 1006 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 BRSK2Q8IWQ3 736 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 ETFBKMTQ8IXQ9 262 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 CHPFQ8IZ52 775 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 RNF10Q8N5U6 811 aaKnown RBP6.37□□□□□ -1.39
SSBP2-211ENST00000509013 TERB1Q8NA31 727 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 MSANTD4Q8NCY6 345 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 ZSWIM2Q8NEG5 633 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 CXorf38Q8TB03 319 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 MYCBPAPQ8TBZ2 947 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 RHBDD1Q8TEB9 315 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 KBTBD7Q8WVZ9 684 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 SAAL1Q96ER3 474 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 CRELD1Q96HD1 420 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 PCED1BQ96HM7 432 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 ANKRD36BP1Q96IX9 119 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 FAM84AQ96KN4 292 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 C8orf48Q96LL4 319 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 SLITRK1Q96PX8 696 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 MMS19Q96T76 1030 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 MTMR12Q9C0I1 747 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 INTS2Q9H0H0 1204 aaKnown RBP6.37□□□□□ -1.39
SSBP2-211ENST00000509013 GAREM1Q9H706 876 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 ANKZF1Q9H8Y5 726 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 PRDM16Q9HAZ2 1276 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 CRTAC1Q9NQ79 661 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 DMAC2Q9NW81 257 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 CACNA2D2Q9NY47 1150 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 RBAKQ9NYW8 714 aaPredicted RBP6.37□□□□□ -1.39
SSBP2-211ENST00000509013 DKK4Q9UBT3 224 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 ADAMTS1Q9UHI8 967 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 SIX4Q9UIU6 781 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 HCN2Q9UL51 889 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 SH3BP1Q9Y3L3 701 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 STARD13Q9Y3M8 1113 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 HYOU1Q9Y4L1 999 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 CAPN6Q9Y6Q1 641 aa6.37□□□□□ -1.39
SSBP2-211ENST00000509013 TSC2P49815 1807 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 A0A087WV48 116 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 CCDC151A5D8V7 595 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 GOLGA8IPA6NC78 632 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 TRABD2BA6NFA1 517 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 GOLGA8JA6NMD2 632 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 MEI4A8MW99 385 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 ZNF185O15231 689 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 HOXC11O43248 304 aaPredicted RBP6.36□□□□□ -1.39
SSBP2-211ENST00000509013 COCHO43405 550 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 ATP8B1O43520 1251 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 CILPO75339 1184 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 PALMO75781 387 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 ZRANB2O95218 330 aaKnown RBP eCLIP6.36□□□□□ -1.39
SSBP2-211ENST00000509013 CER1O95813 267 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 CCDC172P0C7W6 258 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 ZNF883P0CG24 379 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 NCAM1P13591 858 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 PRLRP16471 622 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 TCP1P17987 556 aaKnown RBP6.36□□□□□ -1.39
SSBP2-211ENST00000509013 TNFAIP3P21580 790 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 WARSP23381 471 aaKnown RBP6.36□□□□□ -1.39
SSBP2-211ENST00000509013 MCM3P25205 808 aa6.36□□□□□ -1.39
SSBP2-211ENST00000509013 YWHAQP27348 245 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms