RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 ODC1P11926 461 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 MYOGP15173 224 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 PIK3CAP42336 1068 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 MASP1P48740 699 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 LHX1P48742 406 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 COPB1P53618 953 aaKnown RBP5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 MYL6P60660 151 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 TNNC1P63316 161 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 DSG1Q02413 1049 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 GCNT1Q02742 428 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 SMARCB1Q12824 385 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 GPM6BQ13491 265 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 EXOC3L4Q17RC7 722 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 ZNF699Q32M78 642 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 WDR72Q3MJ13 1102 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 HABP4Q5JVS0 413 aaKnown RBP5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 MIIPQ5JXC2 388 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 LMBRD2Q68DH5 695 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 BICRALQ6AI39 1079 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 KIAA1841Q6NSI8 718 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 CD300LGQ6UXG3 332 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 ATG14Q6ZNE5 492 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 USP53Q70EK8 1073 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 ENOSF1Q7L5Y1 443 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 LIMS2Q7Z4I7 341 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 LUZP1Q86V48 1076 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 UNC93AQ86WB7 457 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 THEM5Q8N1Q8 247 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 SPPL3Q8TCT6 385 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 SENP8Q96LD8 212 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 CLUHP3Q96NS8 147 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 NT5C1BQ96P26 610 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 ERGIC2Q96RQ1 377 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 C17orf80Q9BSJ5 609 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 TTPALQ9BTX7 342 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 XYLT2Q9H1B5 865 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 CXCL16Q9H2A7 254 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 TRIM39Q9HCM9 518 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 TLR9Q9NR96 1032 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 MRPL17Q9NRX2 175 aaKnown RBP5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 MARCH5Q9NX47 278 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 FNIP2Q9P278 1114 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 DPP7Q9UHL4 492 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 FBXL5Q9UKA1 691 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 MAFFQ9ULX9 164 aa5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 PRG3Q9Y2Y8 225 aaPredicted RBP5.84□□□□□ -1.47
HMGB1P44-201ENST00000508597 VWA8A3KMH1 1905 aa5.84□□□□□ -1.48
HMGB1P44-201ENST00000508597 MTCL1Q9Y4B5 1905 aaKnown RBP5.84□□□□□ -1.48
HMGB1P44-201ENST00000508597 PRRC2BQ5JSZ5 2229 aaKnown RBP5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 CHD9Q3L8U1 2897 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 OR6C75A6NL08 312 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 NT5C1B-RDH14C9J2C7 533 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 PES1O00541 588 aaKnown RBP5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 CYB561D2O14569 222 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 GABRDO14764 452 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 B4GALT3O60512 393 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 VNN1O95497 513 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 WARSP23381 471 aaKnown RBP5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 FPR2P25090 351 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 PCSK1P29120 753 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 LTBRP36941 435 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 GLUD2P49448 558 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 CDR1P51861 262 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 MFAP3P55082 362 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 UBASH3AP57075 661 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 NOP14P78316 857 aaKnown RBP5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 YWHAHQ04917 246 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 SMC1AQ14683 1233 aaKnown RBP5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 MAPRE1Q15691 268 aaKnown RBP5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 CBWD6Q4V339 395 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 CBWD3Q5JTY5 395 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 CBWD5Q5RIA9 395 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 FAM171A1Q5VUB5 890 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 IQCEQ6IPM2 695 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 ZNF280DQ6N043 979 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 TRIM65Q6PJ69 517 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 SARM1Q6SZW1 724 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 RTL10Q7L3V2 364 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 APTXQ7Z2E3 356 aaKnown RBP5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 VPS52Q8N1B4 723 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 LZTR1Q8N653 840 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 LMO3Q8TAP4 145 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 SLC7A14Q8TBB6 771 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 TAS1R2Q8TE23 839 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 POF1BQ8WVV4 589 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 ARNTL2Q8WYA1 636 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 MRPL38Q96DV4 380 aaKnown RBP5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 CDCA3Q99618 268 aaPredicted RBP5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 ACBD6Q9BR61 282 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 PAAF1Q9BRP4 392 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 NUP58Q9BVL2 599 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 EDEM3Q9BZQ6 932 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 ZBP1Q9H171 429 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 VPS16Q9H269 839 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 MMRN2Q9H8L6 949 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 PLCB1Q9NQ66 1216 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 GPR27Q9NS67 375 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 MARCH2Q9P0N8 246 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 GCNT4Q9P109 453 aa5.83□□□□□ -1.48
HMGB1P44-201ENST00000508597 HSFX1Q9UBD0 423 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms