RNA–Protein interactions for RNA: ENST00000508459.5

HMGCLL1-208, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-208ENST00000508459 PLCD3Q8N3E9 789 aa14.88□□□□□ -0.03
HMGCLL1-208ENST00000508459 SMRP1Q8NCR6 262 aa14.88□□□□□ -0.03
HMGCLL1-208ENST00000508459 DEPDC1BQ8WUY9 529 aa14.88□□□□□ -0.03
HMGCLL1-208ENST00000508459 RAPGEF5Q92565 580 aa14.88□□□□□ -0.03
HMGCLL1-208ENST00000508459 RUBCNQ92622 972 aa14.88□□□□□ -0.03
HMGCLL1-208ENST00000508459 RNF25Q96BH1 459 aaPredicted RBP14.88□□□□□ -0.03
HMGCLL1-208ENST00000508459 PPP1R2P1Q96PQ5 205 aa14.88□□□□□ -0.03
HMGCLL1-208ENST00000508459 CSPG4P5Q96PW8 444 aa14.88□□□□□ -0.03
HMGCLL1-208ENST00000508459 PEBP4Q96S96 227 aa14.88□□□□□ -0.03
HMGCLL1-208ENST00000508459 PSMB7Q99436 277 aa14.88□□□□□ -0.03
HMGCLL1-208ENST00000508459 RNF38Q9H0F5 515 aa14.88□□□□□ -0.03
HMGCLL1-208ENST00000508459 SIK2Q9H0K1 926 aa14.88□□□□□ -0.03
HMGCLL1-208ENST00000508459 HCFC1R1Q9NWW0 138 aa14.88□□□□□ -0.03
HMGCLL1-208ENST00000508459 NUP210Q8TEM1 1887 aaPredicted RBP14.88□□□□□ -0.03
HMGCLL1-208ENST00000508459 HELZP42694 1942 aaKnown RBP14.88□□□□□ -0.03
HMGCLL1-208ENST00000508459 CHD7Q9P2D1 2997 aa14.88□□□□□ -0.03
HMGCLL1-208ENST00000508459 A0A1B0GVM2 712 aa14.87□□□□□ -0.03
HMGCLL1-208ENST00000508459 TCAF2A6NFQ2 919 aa14.87□□□□□ -0.03
HMGCLL1-208ENST00000508459 E9PAM4 449 aa14.87□□□□□ -0.03
HMGCLL1-208ENST00000508459 LEFTY2O00292 366 aa14.87□□□□□ -0.03
HMGCLL1-208ENST00000508459 CST8O60676 142 aa14.87□□□□□ -0.03
HMGCLL1-208ENST00000508459 SLU7O95391 586 aaKnown RBP14.87□□□□□ -0.03
HMGCLL1-208ENST00000508459 GAS8O95995 478 aa14.87□□□□□ -0.03
HMGCLL1-208ENST00000508459 ACTN2P35609 894 aa14.87□□□□□ -0.03
HMGCLL1-208ENST00000508459 CDH4P55283 916 aa14.87□□□□□ -0.03
HMGCLL1-208ENST00000508459 YBEYP58557 167 aaPredicted RBP14.87□□□□□ -0.03
HMGCLL1-208ENST00000508459 SMAD4Q13485 552 aaKnown RBP14.87□□□□□ -0.03
HMGCLL1-208ENST00000508459 AUHQ13825 339 aaKnown RBP14.87□□□□□ -0.03
HMGCLL1-208ENST00000508459 DHX34Q14147 1143 aaKnown RBP14.87□□□□□ -0.03
HMGCLL1-208ENST00000508459 PDGFRLQ15198 375 aa14.87□□□□□ -0.03
HMGCLL1-208ENST00000508459 MS4A13Q5J8X5 152 aa14.87□□□□□ -0.03
HMGCLL1-208ENST00000508459 C6orf118Q5T5N4 469 aa14.87□□□□□ -0.03
HMGCLL1-208ENST00000508459 SLC9A4Q6AI14 798 aa14.87□□□□□ -0.03
HMGCLL1-208ENST00000508459 RWDD4Q6NW29 188 aaKnown RBP14.87□□□□□ -0.03
HMGCLL1-208ENST00000508459 MFSD7Q6UXD7 560 aa14.87□□□□□ -0.03
HMGCLL1-208ENST00000508459 EP400NLQ6ZTU2 488 aa14.87□□□□□ -0.03
HMGCLL1-208ENST00000508459 METTL3Q86U44 580 aaKnown RBP14.87□□□□□ -0.03
HMGCLL1-208ENST00000508459 DENND1CQ8IV53 801 aa14.87□□□□□ -0.03
HMGCLL1-208ENST00000508459 FAM217AQ8IXS0 508 aa14.87□□□□□ -0.03
HMGCLL1-208ENST00000508459 C12orf50Q8NA57 414 aaPredicted RBP14.87□□□□□ -0.03
HMGCLL1-208ENST00000508459 ZSCAN18Q8TBC5 510 aaPredicted RBP14.87□□□□□ -0.03
HMGCLL1-208ENST00000508459 COG1Q8WTW3 980 aa14.87□□□□□ -0.03
HMGCLL1-208ENST00000508459 MSLNLQ96KJ4 702 aa14.87□□□□□ -0.03
HMGCLL1-208ENST00000508459 CAPZA3Q96KX2 299 aa14.87□□□□□ -0.03
HMGCLL1-208ENST00000508459 RPRD1AQ96P16 312 aaPredicted RBP14.87□□□□□ -0.03
HMGCLL1-208ENST00000508459 ZFP14Q9HCL3 533 aa14.87□□□□□ -0.03
HMGCLL1-208ENST00000508459 CFAP97Q9P2B7 532 aa14.87□□□□□ -0.03
HMGCLL1-208ENST00000508459 NUDT5Q9UKK9 219 aa14.87□□□□□ -0.03
HMGCLL1-208ENST00000508459 HS3ST4Q9Y661 456 aa14.87□□□□□ -0.03
HMGCLL1-208ENST00000508459 C3orf70A6NLC5 250 aaPredicted RBP14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 DRGXA6NNA5 263 aa14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 EFCAB8A8MWE9 144 aa14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 LRIG2O94898 1065 aa14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 NFATC1O95644 943 aa14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 HMBSP08397 361 aa14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 TACR2P21452 398 aa14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 STIP1P31948 543 aaKnown RBP14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 MARCKSL1P49006 195 aa14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 NDST2P52849 883 aa14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 GEMIN4P57678 1058 aaKnown RBP14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 PITX1P78337 314 aaPredicted RBP14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 USP4Q13107 963 aa14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 KLF1Q13351 362 aaPredicted RBP14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 SLC12A1Q13621 1099 aa14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 DPYSQ14117 519 aa14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 CBX2Q14781 532 aaPredicted RBP14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 PAFAH1B3Q15102 231 aaKnown RBP14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 AAK1Q2M2I8 961 aa14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 PARP15Q460N3 678 aa14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 MANEALQ5VSG8 457 aa14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 DCAF12L1Q5VU92 463 aa14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 TIGD7Q6NT04 549 aaPredicted RBP14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 Q6ZNB5 142 aa14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 SETD3Q86TU7 594 aaPredicted RBP14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 ARID3BQ8IVW6 561 aaPredicted RBP14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 NPAS3Q8IXF0 933 aa14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 YAF2Q8IY57 180 aa14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 RTL3Q8N8U3 475 aaKnown RBP14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 SPATA4Q8NEY3 305 aa14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 SH3RF2Q8TEC5 729 aa14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 FGF13Q92913 245 aa14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 ATP2A3Q93084 1043 aa14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 KCTD15Q96SI1 283 aaPredicted RBP14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 S1PR5Q9H228 398 aa14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 LRRC19Q9H756 370 aa14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 ARHGEF4Q9NR80 690 aa14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 CWC15Q9P013 229 aaKnown RBP14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 CLEC1BQ9P126 229 aa14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 AGO1Q9UL18 857 aaKnown RBP14.86□□□□□ -0.03
HMGCLL1-208ENST00000508459 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.85□□□□□ -0.03
HMGCLL1-208ENST00000508459 PI4K2BG5E9Z4 385 aa14.85□□□□□ -0.03
HMGCLL1-208ENST00000508459 SRGAP2O75044 1071 aa14.85□□□□□ -0.03
HMGCLL1-208ENST00000508459 PHF2O75151 1096 aa14.85□□□□□ -0.03
HMGCLL1-208ENST00000508459 MOSPD3O75425 235 aa14.85□□□□□ -0.03
HMGCLL1-208ENST00000508459 ADH1CP00326 375 aa14.85□□□□□ -0.03
HMGCLL1-208ENST00000508459 GOT1P17174 413 aa14.85□□□□□ -0.03
HMGCLL1-208ENST00000508459 CEBPBP17676 345 aa14.85□□□□□ -0.03
HMGCLL1-208ENST00000508459 CCR2P41597 374 aa14.85□□□□□ -0.03
HMGCLL1-208ENST00000508459 IFNAR2P48551 515 aa14.85□□□□□ -0.03
HMGCLL1-208ENST00000508459 PGFP49763 221 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms