RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 ZFHX2Q9C0A1 2572 aaPredicted RBP11.83□□□□□ -0.52
KDM3B-203ENST00000505756 GOLGA6L7A0A1B0GV03 622 aa11.83□□□□□ -0.52
KDM3B-203ENST00000505756 KCNU1A8MYU2 1149 aa11.83□□□□□ -0.52
KDM3B-203ENST00000505756 RPP40O75818 363 aaKnown RBP11.83□□□□□ -0.52
KDM3B-203ENST00000505756 MOCS2O96007 188 aaPredicted RBP11.83□□□□□ -0.52
KDM3B-203ENST00000505756 SERPING1P05155 500 aa11.83□□□□□ -0.52
KDM3B-203ENST00000505756 SKILP12757 684 aa11.83□□□□□ -0.52
KDM3B-203ENST00000505756 HOXB2P14652 356 aa11.83□□□□□ -0.52
KDM3B-203ENST00000505756 CHRNB2P17787 502 aa11.83□□□□□ -0.52
KDM3B-203ENST00000505756 ABCB4P21439 1286 aa11.83□□□□□ -0.52
KDM3B-203ENST00000505756 CCR1P32246 355 aa11.83□□□□□ -0.52
KDM3B-203ENST00000505756 SGSHP51688 502 aa11.83□□□□□ -0.52
KDM3B-203ENST00000505756 ARID5AQ03989 594 aa11.83□□□□□ -0.52
KDM3B-203ENST00000505756 SRSF5Q13243 272 aaKnown RBP11.83□□□□□ -0.52
KDM3B-203ENST00000505756 MTA1Q13330 715 aa11.83□□□□□ -0.52
KDM3B-203ENST00000505756 TSR1Q2NL82 804 aaKnown RBP11.83□□□□□ -0.52
KDM3B-203ENST00000505756 ZC3H12AQ5D1E8 599 aaKnown RBP11.83□□□□□ -0.52
KDM3B-203ENST00000505756 MS4A13Q5J8X5 152 aa11.83□□□□□ -0.52
KDM3B-203ENST00000505756 FAM102AQ5T9C2 384 aaPredicted RBP11.83□□□□□ -0.52
KDM3B-203ENST00000505756 RNF43Q68DV7 783 aa11.83□□□□□ -0.52
KDM3B-203ENST00000505756 LAIR1Q6GTX8 287 aa11.83□□□□□ -0.52
KDM3B-203ENST00000505756 SDE2Q6IQ49 451 aa11.83□□□□□ -0.52
KDM3B-203ENST00000505756 ANO7Q6IWH7 933 aa11.83□□□□□ -0.52
KDM3B-203ENST00000505756 RFWD3Q6PCD5 774 aa11.83□□□□□ -0.52
KDM3B-203ENST00000505756 PRR23BQ6ZRT6 265 aa11.83□□□□□ -0.52
KDM3B-203ENST00000505756 CEP68Q76N32 757 aa11.83□□□□□ -0.52
KDM3B-203ENST00000505756 ZSCAN30Q86W11 494 aa11.83□□□□□ -0.52
KDM3B-203ENST00000505756 CHPFQ8IZ52 775 aa11.83□□□□□ -0.52
KDM3B-203ENST00000505756 ATP6V0D2Q8N8Y2 350 aa11.83□□□□□ -0.52
KDM3B-203ENST00000505756 HJURPQ8NCD3 748 aaPredicted RBP11.83□□□□□ -0.52
KDM3B-203ENST00000505756 MDGA1Q8NFP4 955 aa11.83□□□□□ -0.52
KDM3B-203ENST00000505756 UCMAQ8WVF2 138 aa11.83□□□□□ -0.52
KDM3B-203ENST00000505756 CPA5Q8WXQ8 436 aa11.83□□□□□ -0.52
KDM3B-203ENST00000505756 PRICKLE1Q96MT3 831 aaPredicted RBP11.83□□□□□ -0.52
KDM3B-203ENST00000505756 NPY6RQ99463 290 aa11.83□□□□□ -0.52
KDM3B-203ENST00000505756 GABRG3Q99928 467 aa11.83□□□□□ -0.52
KDM3B-203ENST00000505756 ZDHHC4Q9NPG8 344 aa11.83□□□□□ -0.52
KDM3B-203ENST00000505756 TMEM51Q9NW97 253 aa11.83□□□□□ -0.52
KDM3B-203ENST00000505756 ZNHIT6Q9NWK9 470 aaKnown RBP11.83□□□□□ -0.52
KDM3B-203ENST00000505756 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.83□□□□□ -0.52
KDM3B-203ENST00000505756 ARHGAP20Q9P2F6 1191 aa11.83□□□□□ -0.52
KDM3B-203ENST00000505756 NCDNQ9UBB6 729 aa11.83□□□□□ -0.52
KDM3B-203ENST00000505756 SLC12A6Q9UHW9 1150 aa11.83□□□□□ -0.52
KDM3B-203ENST00000505756 STAP1Q9ULZ2 295 aa11.83□□□□□ -0.52
KDM3B-203ENST00000505756 NENFQ9UMX5 172 aa11.83□□□□□ -0.52
KDM3B-203ENST00000505756 SYNJ2BP-COX16A0A087WUM0 186 aa11.82□□□□□ -0.52
KDM3B-203ENST00000505756 M0QYT0 321 aa11.82□□□□□ -0.52
KDM3B-203ENST00000505756 TIMM44O43615 452 aa11.82□□□□□ -0.52
KDM3B-203ENST00000505756 TBL1XO60907 577 aa11.82□□□□□ -0.52
KDM3B-203ENST00000505756 UNGP13051 313 aaPredicted RBP11.82□□□□□ -0.52
KDM3B-203ENST00000505756 MMP8P22894 467 aa11.82□□□□□ -0.52
KDM3B-203ENST00000505756 HLA-FP30511 346 aa11.82□□□□□ -0.52
KDM3B-203ENST00000505756 RNASE9P60153 205 aaKnown RBP11.82□□□□□ -0.52
KDM3B-203ENST00000505756 CENPCQ03188 943 aa11.82□□□□□ -0.52
KDM3B-203ENST00000505756 NME3Q13232 169 aa11.82□□□□□ -0.52
KDM3B-203ENST00000505756 ASIC2Q16515 512 aa11.82□□□□□ -0.52
KDM3B-203ENST00000505756 ARCQ7LC44 396 aa11.82□□□□□ -0.52
KDM3B-203ENST00000505756 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.82□□□□□ -0.52
KDM3B-203ENST00000505756 KIAA1524Q8TCG1 905 aa11.82□□□□□ -0.52
KDM3B-203ENST00000505756 WFIKKN2Q8TEU8 576 aa11.82□□□□□ -0.52
KDM3B-203ENST00000505756 RNF34Q969K3 372 aa11.82□□□□□ -0.52
KDM3B-203ENST00000505756 NT5C3BQ969T7 300 aa11.82□□□□□ -0.52
KDM3B-203ENST00000505756 ACOX2Q99424 681 aa11.82□□□□□ -0.52
KDM3B-203ENST00000505756 HINFPQ9BQA5 517 aa11.82□□□□□ -0.52
KDM3B-203ENST00000505756 ELOVL2Q9NXB9 296 aa11.82□□□□□ -0.52
KDM3B-203ENST00000505756 COX16Q9P0S2 106 aa11.82□□□□□ -0.52
KDM3B-203ENST00000505756 THAP10Q9P2Z0 257 aaPredicted RBP11.82□□□□□ -0.52
KDM3B-203ENST00000505756 XPO7Q9UIA9 1087 aaKnown RBP11.82□□□□□ -0.52
KDM3B-203ENST00000505756 GMEB2Q9UKD1 530 aa11.82□□□□□ -0.52
KDM3B-203ENST00000505756 FRYLO94915 3013 aa11.82□□□□□ -0.52
KDM3B-203ENST00000505756 ATG2BQ96BY7 2078 aa11.82□□□□□ -0.52
KDM3B-203ENST00000505756 A0A1W2PQF6 199 aa11.81□□□□□ -0.52
KDM3B-203ENST00000505756 TCRBV21S2A2A0A5A6 115 aa11.81□□□□□ -0.52
KDM3B-203ENST00000505756 FAM170AA1A519 330 aa11.81□□□□□ -0.52
KDM3B-203ENST00000505756 EIF3CLB5ME19 914 aaKnown RBP11.81□□□□□ -0.52
KDM3B-203ENST00000505756 F5H5T6 163 aa11.81□□□□□ -0.52
KDM3B-203ENST00000505756 GOLGA8SH3BPF8 625 aa11.81□□□□□ -0.52
KDM3B-203ENST00000505756 F9P00740 461 aa11.81□□□□□ -0.52
KDM3B-203ENST00000505756 PABPC1P11940 636 aaKnown RBP11.81□□□□□ -0.52
KDM3B-203ENST00000505756 TACR2P21452 398 aa11.81□□□□□ -0.52
KDM3B-203ENST00000505756 WASP42768 502 aa11.81□□□□□ -0.52
KDM3B-203ENST00000505756 NSFP46459 744 aaKnown RBP11.81□□□□□ -0.52
KDM3B-203ENST00000505756 SULT1E1P49888 294 aa11.81□□□□□ -0.52
KDM3B-203ENST00000505756 ENPP2Q13822 863 aa11.81□□□□□ -0.52
KDM3B-203ENST00000505756 LPAL2Q16609 132 aa11.81□□□□□ -0.52
KDM3B-203ENST00000505756 CLEC16AQ2KHT3 1053 aa11.81□□□□□ -0.52
KDM3B-203ENST00000505756 SLC25A52Q3SY17 297 aa11.81□□□□□ -0.52
KDM3B-203ENST00000505756 USP39Q53GS9 565 aaKnown RBP11.81□□□□□ -0.52
KDM3B-203ENST00000505756 C2CD6Q53TS8 623 aa11.81□□□□□ -0.52
KDM3B-203ENST00000505756 BRMS1LQ5PSV4 323 aa11.81□□□□□ -0.52
KDM3B-203ENST00000505756 OTUD1Q5VV17 481 aaPredicted RBP11.81□□□□□ -0.52
KDM3B-203ENST00000505756 RAP1GAP2Q684P5 730 aa11.81□□□□□ -0.52
KDM3B-203ENST00000505756 TMEM215Q68D42 235 aa11.81□□□□□ -0.52
KDM3B-203ENST00000505756 RAD9BQ6WBX8 426 aa11.81□□□□□ -0.52
KDM3B-203ENST00000505756 MMS22LQ6ZRQ5 1243 aa11.81□□□□□ -0.52
KDM3B-203ENST00000505756 ZNF662Q6ZS27 426 aa11.81□□□□□ -0.52
KDM3B-203ENST00000505756 SND1Q7KZF4 910 aaKnown RBP eCLIP11.81□□□□□ -0.52
KDM3B-203ENST00000505756 KIAA0907Q7Z7F0 614 aaPredicted RBP11.81□□□□□ -0.52
KDM3B-203ENST00000505756 C11orf74Q86VG3 221 aa11.81□□□□□ -0.52
KDM3B-203ENST00000505756 CHSY1Q86X52 802 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms