RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 FAM47DPA6NHR8 397 aa10.32□□□□□ -0.76
NEDD9-210ENST00000505589 TLR4O00206 839 aa10.32□□□□□ -0.76
NEDD9-210ENST00000505589 RIOK3O14730 519 aaKnown RBP10.32□□□□□ -0.76
NEDD9-210ENST00000505589 MYL1P05976 194 aa10.32□□□□□ -0.76
NEDD9-210ENST00000505589 SYT1P21579 422 aa10.32□□□□□ -0.76
NEDD9-210ENST00000505589 GLDCP23378 1020 aa10.32□□□□□ -0.76
NEDD9-210ENST00000505589 RPL13P26373 211 aaKnown RBP10.32□□□□□ -0.76
NEDD9-210ENST00000505589 ASPAP45381 313 aa10.32□□□□□ -0.76
NEDD9-210ENST00000505589 SLC11A2P49281 568 aa10.32□□□□□ -0.76
NEDD9-210ENST00000505589 VAMP7P51809 220 aa10.32□□□□□ -0.76
NEDD9-210ENST00000505589 GALCP54803 685 aa10.32□□□□□ -0.76
NEDD9-210ENST00000505589 EHHADHQ08426 723 aa10.32□□□□□ -0.76
NEDD9-210ENST00000505589 CCDC15Q0P6D6 951 aa10.32□□□□□ -0.76
NEDD9-210ENST00000505589 CUL4AQ13619 759 aa10.32□□□□□ -0.76
NEDD9-210ENST00000505589 BECN1Q14457 450 aa10.32□□□□□ -0.76
NEDD9-210ENST00000505589 ARID5BQ14865 1188 aa10.32□□□□□ -0.76
NEDD9-210ENST00000505589 TBC1D25Q3MII6 688 aa10.32□□□□□ -0.76
NEDD9-210ENST00000505589 PPP1R26Q5T8A7 1209 aaPredicted RBP10.32□□□□□ -0.76
NEDD9-210ENST00000505589 HES3Q5TGS1 186 aa10.32□□□□□ -0.76
NEDD9-210ENST00000505589 TMEM215Q68D42 235 aa10.32□□□□□ -0.76
NEDD9-210ENST00000505589 PM20D1Q6GTS8 502 aa10.32□□□□□ -0.76
NEDD9-210ENST00000505589 FBXL19Q6PCT2 694 aa10.32□□□□□ -0.76
NEDD9-210ENST00000505589 SND1Q7KZF4 910 aaKnown RBP eCLIP10.32□□□□□ -0.76
NEDD9-210ENST00000505589 GPRIN1Q7Z2K8 1008 aa10.32□□□□□ -0.76
NEDD9-210ENST00000505589 ADIPOR2Q86V24 386 aa10.32□□□□□ -0.76
NEDD9-210ENST00000505589 CACUL1Q86Y37 369 aa10.32□□□□□ -0.76
NEDD9-210ENST00000505589 CEP57L1Q8IYX8 460 aa10.32□□□□□ -0.76
NEDD9-210ENST00000505589 ZNF843Q8N446 348 aa10.32□□□□□ -0.76
NEDD9-210ENST00000505589 EID2Q8N6I1 236 aa10.32□□□□□ -0.76
NEDD9-210ENST00000505589 ANKRD52Q8NB46 1076 aa10.32□□□□□ -0.76
NEDD9-210ENST00000505589 RFFLQ8WZ73 363 aa10.32□□□□□ -0.76
NEDD9-210ENST00000505589 CCDC97Q96F63 343 aaPredicted RBP10.32□□□□□ -0.76
NEDD9-210ENST00000505589 INTS4Q96HW7 963 aaKnown RBP10.32□□□□□ -0.76
NEDD9-210ENST00000505589 LGMNQ99538 433 aa10.32□□□□□ -0.76
NEDD9-210ENST00000505589 ARID3AQ99856 593 aa10.32□□□□□ -0.76
NEDD9-210ENST00000505589 GZF1Q9H116 711 aaPredicted RBP10.32□□□□□ -0.76
NEDD9-210ENST00000505589 ABCB8Q9NUT2 735 aa10.32□□□□□ -0.76
NEDD9-210ENST00000505589 HESX1Q9UBX0 185 aa10.32□□□□□ -0.76
NEDD9-210ENST00000505589 ITPR1Q14643 2758 aa10.31□□□□□ -0.76
NEDD9-210ENST00000505589 POLR2DO15514 142 aaKnown RBP10.31□□□□□ -0.76
NEDD9-210ENST00000505589 STX10O60499 249 aa10.31□□□□□ -0.76
NEDD9-210ENST00000505589 RNGTTO60942 597 aaKnown RBP10.31□□□□□ -0.76
NEDD9-210ENST00000505589 ZIC2O95409 532 aaPredicted RBP10.31□□□□□ -0.76
NEDD9-210ENST00000505589 ADH1BP00325 375 aa10.31□□□□□ -0.76
NEDD9-210ENST00000505589 HLA-DRAP01903 254 aa10.31□□□□□ -0.76
NEDD9-210ENST00000505589 PRB1P04280 392 aa10.31□□□□□ -0.76
NEDD9-210ENST00000505589 SRPRAP08240 638 aaKnown RBP10.31□□□□□ -0.76
NEDD9-210ENST00000505589 ACP1P24666 158 aa10.31□□□□□ -0.76
NEDD9-210ENST00000505589 HOXD9P28356 352 aaPredicted RBP10.31□□□□□ -0.76
NEDD9-210ENST00000505589 GTF2H1P32780 548 aa10.31□□□□□ -0.76
NEDD9-210ENST00000505589 TKTL1P51854 596 aa10.31□□□□□ -0.76
NEDD9-210ENST00000505589 TMPRSS3P57727 454 aa10.31□□□□□ -0.76
NEDD9-210ENST00000505589 CXADRP78310 365 aa10.31□□□□□ -0.76
NEDD9-210ENST00000505589 IL9RQ01113 521 aa10.31□□□□□ -0.76
NEDD9-210ENST00000505589 STAT4Q14765 748 aa10.31□□□□□ -0.76
NEDD9-210ENST00000505589 HNRNPA1L2Q32P51 320 aaKnown RBP10.31□□□□□ -0.76
NEDD9-210ENST00000505589 PKDCCQ504Y2 493 aa10.31□□□□□ -0.76
NEDD9-210ENST00000505589 RAB41Q5JT25 222 aa10.31□□□□□ -0.76
NEDD9-210ENST00000505589 CEP135Q66GS9 1140 aa10.31□□□□□ -0.76
NEDD9-210ENST00000505589 NUGGCQ68CJ6 796 aa10.31□□□□□ -0.76
NEDD9-210ENST00000505589 ARHGAP17Q68EM7 881 aa10.31□□□□□ -0.76
NEDD9-210ENST00000505589 MARCH9Q86YJ5 346 aa10.31□□□□□ -0.76
NEDD9-210ENST00000505589 GATAD2AQ86YP4 633 aa10.31□□□□□ -0.76
NEDD9-210ENST00000505589 FMNL3Q8IVF7 1028 aa10.31□□□□□ -0.76
NEDD9-210ENST00000505589 MFSD2AQ8NA29 543 aa10.31□□□□□ -0.76
NEDD9-210ENST00000505589 FIBINQ8TAL6 211 aa10.31□□□□□ -0.76
NEDD9-210ENST00000505589 CYB5D2Q8WUJ1 264 aa10.31□□□□□ -0.76
NEDD9-210ENST00000505589 SORCS1Q8WY21 1168 aa10.31□□□□□ -0.76
NEDD9-210ENST00000505589 TSC1Q92574 1164 aa10.31□□□□□ -0.76
NEDD9-210ENST00000505589 SNX21Q969T3 373 aa10.31□□□□□ -0.76
NEDD9-210ENST00000505589 GRAMD1AQ96CP6 724 aa10.31□□□□□ -0.76
NEDD9-210ENST00000505589 DPH1Q9BZG8 443 aa10.31□□□□□ -0.76
NEDD9-210ENST00000505589 NIF3L1Q9GZT8 377 aa10.31□□□□□ -0.76
NEDD9-210ENST00000505589 PABPC3Q9H361 631 aaKnown RBP10.31□□□□□ -0.76
NEDD9-210ENST00000505589 EXOC1Q9NV70 894 aa10.31□□□□□ -0.76
NEDD9-210ENST00000505589 KIAA1257Q9ULG3 409 aa10.31□□□□□ -0.76
NEDD9-210ENST00000505589 CLEC4EQ9ULY5 219 aa10.31□□□□□ -0.76
NEDD9-210ENST00000505589 IGSF10Q6WRI0 2623 aa10.31□□□□□ -0.76
NEDD9-210ENST00000505589 TBC1D3DA0A087WVF3 549 aa10.3□□□□□ -0.76
NEDD9-210ENST00000505589 TBC1D3IA0A087WXS9 549 aa10.3□□□□□ -0.76
NEDD9-210ENST00000505589 TBC1D3EA0A087X179 549 aa10.3□□□□□ -0.76
NEDD9-210ENST00000505589 TBC1D3KA0A087X1G2 549 aa10.3□□□□□ -0.76
NEDD9-210ENST00000505589 EDDM13A0A1B0GTR0 161 aa10.3□□□□□ -0.76
NEDD9-210ENST00000505589 TBC1D3FA6NER0 549 aaPredicted RBP10.3□□□□□ -0.76
NEDD9-210ENST00000505589 TBC1D3LB9A6J9 549 aa10.3□□□□□ -0.76
NEDD9-210ENST00000505589 TLX3O43711 291 aaPredicted RBP10.3□□□□□ -0.76
NEDD9-210ENST00000505589 RNASEH2AO75792 299 aaKnown RBP10.3□□□□□ -0.76
NEDD9-210ENST00000505589 C1QL1O75973 258 aa10.3□□□□□ -0.76
NEDD9-210ENST00000505589 YEATS4O95619 227 aa10.3□□□□□ -0.76
NEDD9-210ENST00000505589 NR3C1P04150 777 aa10.3□□□□□ -0.76
NEDD9-210ENST00000505589 IGHV4-34P06331 123 aa10.3□□□□□ -0.76
NEDD9-210ENST00000505589 PRR29P0C7W0 189 aa10.3□□□□□ -0.76
NEDD9-210ENST00000505589 TBC1D3HP0C7X1 549 aa10.3□□□□□ -0.76
NEDD9-210ENST00000505589 GOT1P17174 413 aa10.3□□□□□ -0.76
NEDD9-210ENST00000505589 CD58P19256 250 aa10.3□□□□□ -0.76
NEDD9-210ENST00000505589 C5AR1P21730 350 aa10.3□□□□□ -0.76
NEDD9-210ENST00000505589 EPHA8P29322 1005 aaPredicted RBP10.3□□□□□ -0.76
NEDD9-210ENST00000505589 SLC8A1P32418 973 aa10.3□□□□□ -0.76
NEDD9-210ENST00000505589 PSMC2P35998 433 aaKnown RBP10.3□□□□□ -0.76
NEDD9-210ENST00000505589 ACADVLP49748 655 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms