RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 ACSF2Q96CM8 615 aaPredicted RBP5.12□□□□□ -1.59
LMNB1-208ENST00000504788 FAF2Q96CS3 445 aa5.12□□□□□ -1.59
LMNB1-208ENST00000504788 HES6Q96HZ4 224 aa5.12□□□□□ -1.59
LMNB1-208ENST00000504788 BTN2A3PQ96KV6 586 aa5.12□□□□□ -1.59
LMNB1-208ENST00000504788 HAPLN3Q96S86 360 aa5.12□□□□□ -1.59
LMNB1-208ENST00000504788 SNRNP25Q9BV90 132 aaKnown RBP5.12□□□□□ -1.59
LMNB1-208ENST00000504788 TKTL2Q9H0I9 626 aa5.12□□□□□ -1.59
LMNB1-208ENST00000504788 OSBPL2Q9H1P3 480 aa5.12□□□□□ -1.59
LMNB1-208ENST00000504788 NOL6Q9H6R4 1146 aaKnown RBP5.12□□□□□ -1.59
LMNB1-208ENST00000504788 FBRSL1Q9HCM7 1045 aaKnown RBP5.12□□□□□ -1.59
LMNB1-208ENST00000504788 CTTNBP2NLQ9P2B4 639 aa5.12□□□□□ -1.59
LMNB1-208ENST00000504788 IP6K2Q9UHH9 426 aa5.12□□□□□ -1.59
LMNB1-208ENST00000504788 USP18Q9UMW8 372 aa5.12□□□□□ -1.59
LMNB1-208ENST00000504788 DUSP12Q9UNI6 340 aa5.12□□□□□ -1.59
LMNB1-208ENST00000504788 NR2E1Q9Y466 385 aa5.12□□□□□ -1.59
LMNB1-208ENST00000504788 HYOU1Q9Y4L1 999 aa5.12□□□□□ -1.59
LMNB1-208ENST00000504788 SNX10Q9Y5X0 201 aa5.12□□□□□ -1.59
LMNB1-208ENST00000504788 BPTFQ12830 3046 aa5.12□□□□□ -1.59
LMNB1-208ENST00000504788 CUL9Q8IWT3 2517 aa5.12□□□□□ -1.59
LMNB1-208ENST00000504788 EML5Q05BV3 1969 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 KRBA1A5PL33 1030 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 GOLGA6L6A8MZA4 724 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 MYO1FO00160 1098 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 CAPN9O14815 690 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 HOXC11O43248 304 aaPredicted RBP5.11□□□□□ -1.59
LMNB1-208ENST00000504788 CNTN5O94779 1100 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 LRIG2O94898 1065 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 MOCS3O95396 460 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 CISD3P0C7P0 127 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 COMTP21964 271 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 PSMA2P25787 234 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 CTNNA1P35221 906 aaKnown RBP5.11□□□□□ -1.59
LMNB1-208ENST00000504788 KPNA1P52294 538 aaPredicted RBP5.11□□□□□ -1.59
LMNB1-208ENST00000504788 AIF1P55008 147 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 VCPP55072 806 aaKnown RBP5.11□□□□□ -1.59
LMNB1-208ENST00000504788 RPS24P62847 133 aaKnown RBP5.11□□□□□ -1.59
LMNB1-208ENST00000504788 DEUP1Q05D60 604 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 NME3Q13232 169 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 PDAP1Q13442 181 aaKnown RBP5.11□□□□□ -1.59
LMNB1-208ENST00000504788 TDGQ13569 410 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 AUHQ13825 339 aaKnown RBP5.11□□□□□ -1.59
LMNB1-208ENST00000504788 GRM2Q14416 872 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 DHCR24Q15392 516 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 SPA17Q15506 151 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 ALFQ53S48 1182 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 HS1BP3Q53T59 392 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 FSCBQ5H9T9 825 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 TJAP1Q5JTD0 557 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 MPP7Q5T2T1 576 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 LRRC38Q5VT99 294 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 TMEM215Q68D42 235 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 CC2D1AQ6P1N0 951 aaPredicted RBP5.11□□□□□ -1.59
LMNB1-208ENST00000504788 RFWD3Q6PCD5 774 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 DCUN1D2Q6PH85 259 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 RSRC2Q7L4I2 434 aaKnown RBP5.11□□□□□ -1.59
LMNB1-208ENST00000504788 TADA2BQ86TJ2 420 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 DDX42Q86XP3 938 aaKnown RBP eCLIP5.11□□□□□ -1.59
LMNB1-208ENST00000504788 PSTKQ8IV42 348 aaKnown RBP5.11□□□□□ -1.59
LMNB1-208ENST00000504788 SFTPA1Q8IWL2 248 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 C17orf53Q8N3J3 647 aaPredicted RBP5.11□□□□□ -1.59
LMNB1-208ENST00000504788 RNF139Q8WU17 664 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 TEKT4Q8WW24 435 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 DNASE1L2Q92874 299 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 IRF7Q92985 503 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 OTUB2Q96DC9 234 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 MYO19Q96H55 970 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 GCNAQ96QF7 691 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 TLR10Q9BXR5 811 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 EBF3Q9H4W6 596 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 SLITRK6Q9H5Y7 841 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 WDCPQ9H6R7 721 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 ECT2Q9H8V3 914 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 SPHK2Q9NRA0 654 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 PPARGC1AQ9UBK2 798 aaKnown RBP5.11□□□□□ -1.59
LMNB1-208ENST00000504788 INTS6Q9UL03 887 aaKnown RBP5.11□□□□□ -1.59
LMNB1-208ENST00000504788 PAXBP1Q9Y5B6 917 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 OR51B4Q9Y5P0 310 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 ZNF318Q5VUA4 2279 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 SHROOM3Q8TF72 1996 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 MACROD2A1Z1Q3 448 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 WASH4PA8MWX3 477 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 ZNF487B1APH4 448 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 DCLK1O15075 740 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 CACNG3O60359 315 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 CD160O95971 181 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 HMBSP08397 361 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 IRF1P10914 325 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 SLC2A3P11169 496 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 SRFP11831 508 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 TACR2P21452 398 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 HLA-FP30511 346 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 GJA4P35212 333 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 SLC1A1P43005 524 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 SOX9P48436 509 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 HCAR3P49019 387 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 KIF5AQ12840 1032 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 RUNX3Q13761 415 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 DPYSQ14117 519 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 DPYSL3Q14195 570 aa5.11□□□□□ -1.59
LMNB1-208ENST00000504788 MESDQ14696 234 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms