RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 ZNF318Q5VUA4 2279 aa12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 NYNRINQ9P2P1 1898 aaKnown RBP12.33□□□□□ -0.44
PDLIM5-208ENST00000504489 GOLGA6L7A0A1B0GV03 622 aa12.32□□□□□ -0.44
PDLIM5-208ENST00000504489 I6L893 689 aaPredicted RBP12.32□□□□□ -0.44
PDLIM5-208ENST00000504489 MYO1FO00160 1098 aa12.32□□□□□ -0.44
PDLIM5-208ENST00000504489 TRDMT1O14717 391 aaKnown RBP12.32□□□□□ -0.44
PDLIM5-208ENST00000504489 CACNG3O60359 315 aa12.32□□□□□ -0.44
PDLIM5-208ENST00000504489 MTA2O94776 668 aa12.32□□□□□ -0.44
PDLIM5-208ENST00000504489 PENKP01210 267 aaPredicted RBP12.32□□□□□ -0.44
PDLIM5-208ENST00000504489 TYRP14679 529 aa12.32□□□□□ -0.44
PDLIM5-208ENST00000504489 TACR2P21452 398 aa12.32□□□□□ -0.44
PDLIM5-208ENST00000504489 ADRA1BP35368 520 aa12.32□□□□□ -0.44
PDLIM5-208ENST00000504489 OPRD1P41143 372 aa12.32□□□□□ -0.44
PDLIM5-208ENST00000504489 VCPP55072 806 aaKnown RBP12.32□□□□□ -0.44
PDLIM5-208ENST00000504489 ARL13BQ3SXY8 428 aa12.32□□□□□ -0.44
PDLIM5-208ENST00000504489 MPP7Q5T2T1 576 aa12.32□□□□□ -0.44
PDLIM5-208ENST00000504489 RAP1GAP2Q684P5 730 aa12.32□□□□□ -0.44
PDLIM5-208ENST00000504489 RNF43Q68DV7 783 aa12.32□□□□□ -0.44
PDLIM5-208ENST00000504489 RFWD3Q6PCD5 774 aa12.32□□□□□ -0.44
PDLIM5-208ENST00000504489 TXNDC11Q6PKC3 985 aa12.32□□□□□ -0.44
PDLIM5-208ENST00000504489 ZNF852Q6ZMS4 543 aa12.32□□□□□ -0.44
PDLIM5-208ENST00000504489 BMP8AQ7Z5Y6 402 aa12.32□□□□□ -0.44
PDLIM5-208ENST00000504489 CHSY1Q86X52 802 aa12.32□□□□□ -0.44
PDLIM5-208ENST00000504489 RHOT2Q8IXI1 618 aa12.32□□□□□ -0.44
PDLIM5-208ENST00000504489 ETFBKMTQ8IXQ9 262 aa12.32□□□□□ -0.44
PDLIM5-208ENST00000504489 ARFGAP1Q8N6T3 406 aa12.32□□□□□ -0.44
PDLIM5-208ENST00000504489 SLC35G2Q8TBE7 412 aa12.32□□□□□ -0.44
PDLIM5-208ENST00000504489 RFFLQ8WZ73 363 aa12.32□□□□□ -0.44
PDLIM5-208ENST00000504489 FAM3CQ92520 227 aa12.32□□□□□ -0.44
PDLIM5-208ENST00000504489 PDLIM2Q96JY6 352 aa12.32□□□□□ -0.44
PDLIM5-208ENST00000504489 XPO6Q96QU8 1125 aaKnown RBP12.32□□□□□ -0.44
PDLIM5-208ENST00000504489 SLC2A11Q9BYW1 496 aa12.32□□□□□ -0.44
PDLIM5-208ENST00000504489 OSBPL6Q9BZF3 934 aa12.32□□□□□ -0.44
PDLIM5-208ENST00000504489 FBXO10Q9UK96 956 aa12.32□□□□□ -0.44
PDLIM5-208ENST00000504489 MRPS17Q9Y2R5 130 aaKnown RBP12.32□□□□□ -0.44
PDLIM5-208ENST00000504489 CKAP5Q14008 2032 aa12.32□□□□□ -0.44
PDLIM5-208ENST00000504489 A0A0A6YYK5 440 aaPredicted RBP12.31□□□□□ -0.44
PDLIM5-208ENST00000504489 KANSL1LA0AUZ9 987 aa12.31□□□□□ -0.44
PDLIM5-208ENST00000504489 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.31□□□□□ -0.44
PDLIM5-208ENST00000504489 NEDD8-MDP1E9PL57 170 aa12.31□□□□□ -0.44
PDLIM5-208ENST00000504489 F5H5T6 163 aa12.31□□□□□ -0.44
PDLIM5-208ENST00000504489 ARHGAP6O43182 974 aa12.31□□□□□ -0.44
PDLIM5-208ENST00000504489 TSPAN3O60637 253 aa12.31□□□□□ -0.44
PDLIM5-208ENST00000504489 PCK1P35558 622 aa12.31□□□□□ -0.44
PDLIM5-208ENST00000504489 GALK1P51570 392 aa12.31□□□□□ -0.44
PDLIM5-208ENST00000504489 AIF1P55008 147 aa12.31□□□□□ -0.44
PDLIM5-208ENST00000504489 HADHBP55084 474 aaKnown RBP12.31□□□□□ -0.44
PDLIM5-208ENST00000504489 KRT83P78385 493 aa12.31□□□□□ -0.44
PDLIM5-208ENST00000504489 NRG1Q02297 640 aaPredicted RBP12.31□□□□□ -0.44
PDLIM5-208ENST00000504489 SCAPQ12770 1279 aa12.31□□□□□ -0.44
PDLIM5-208ENST00000504489 AUHQ13825 339 aaKnown RBP12.31□□□□□ -0.44
PDLIM5-208ENST00000504489 C5orf22Q49AR2 442 aa12.31□□□□□ -0.44
PDLIM5-208ENST00000504489 PREPLQ4J6C6 727 aaPredicted RBP12.31□□□□□ -0.44
PDLIM5-208ENST00000504489 TMEM196Q5HYL7 178 aa12.31□□□□□ -0.44
PDLIM5-208ENST00000504489 SCYL2Q6P3W7 929 aa12.31□□□□□ -0.44
PDLIM5-208ENST00000504489 SLFN11Q7Z7L1 901 aa12.31□□□□□ -0.44
PDLIM5-208ENST00000504489 SUGP1Q8IWZ8 645 aaKnown RBP12.31□□□□□ -0.44
PDLIM5-208ENST00000504489 LGI2Q8N0V4 545 aa12.31□□□□□ -0.44
PDLIM5-208ENST00000504489 HJURPQ8NCD3 748 aaPredicted RBP12.31□□□□□ -0.44
PDLIM5-208ENST00000504489 DDI1Q8WTU0 396 aa12.31□□□□□ -0.44
PDLIM5-208ENST00000504489 CD101Q93033 1021 aa12.31□□□□□ -0.44
PDLIM5-208ENST00000504489 P2RY11Q96G91 374 aa12.31□□□□□ -0.44
PDLIM5-208ENST00000504489 KCNK17Q96T54 332 aa12.31□□□□□ -0.44
PDLIM5-208ENST00000504489 P2RY13Q9BPV8 354 aa12.31□□□□□ -0.44
PDLIM5-208ENST00000504489 SIK2Q9H0K1 926 aa12.31□□□□□ -0.44
PDLIM5-208ENST00000504489 OSBPL2Q9H1P3 480 aa12.31□□□□□ -0.44
PDLIM5-208ENST00000504489 TBC1D17Q9HA65 648 aa12.31□□□□□ -0.44
PDLIM5-208ENST00000504489 LTB4R2Q9NPC1 389 aa12.31□□□□□ -0.44
PDLIM5-208ENST00000504489 OSGEPQ9NPF4 335 aa12.31□□□□□ -0.44
PDLIM5-208ENST00000504489 REXO2Q9Y3B8 237 aaKnown RBP12.31□□□□□ -0.44
PDLIM5-208ENST00000504489 HS3ST4Q9Y661 456 aa12.31□□□□□ -0.44
PDLIM5-208ENST00000504489 A0A0A0MRY4 1105 aa12.3□□□□□ -0.44
PDLIM5-208ENST00000504489 TYW5A2RUC4 315 aaKnown RBP12.3□□□□□ -0.44
PDLIM5-208ENST00000504489 DLL1O00548 723 aa12.3□□□□□ -0.44
PDLIM5-208ENST00000504489 PJA2O43164 708 aa12.3□□□□□ -0.44
PDLIM5-208ENST00000504489 GPR37L1O60883 481 aa12.3□□□□□ -0.44
PDLIM5-208ENST00000504489 TULP3O75386 442 aa12.3□□□□□ -0.44
PDLIM5-208ENST00000504489 LRCH4O75427 683 aa12.3□□□□□ -0.44
PDLIM5-208ENST00000504489 CD72P21854 359 aa12.3□□□□□ -0.44
PDLIM5-208ENST00000504489 HOXD9P28356 352 aaPredicted RBP12.3□□□□□ -0.44
PDLIM5-208ENST00000504489 MIPP30301 263 aa12.3□□□□□ -0.44
PDLIM5-208ENST00000504489 ARHGAP25P42331 645 aa12.3□□□□□ -0.44
PDLIM5-208ENST00000504489 SLC6A11P48066 632 aa12.3□□□□□ -0.44
PDLIM5-208ENST00000504489 SGSHP51688 502 aa12.3□□□□□ -0.44
PDLIM5-208ENST00000504489 VAV2P52735 878 aa12.3□□□□□ -0.44
PDLIM5-208ENST00000504489 RPS24P62847 133 aaKnown RBP12.3□□□□□ -0.44
PDLIM5-208ENST00000504489 PON2Q15165 354 aa12.3□□□□□ -0.44
PDLIM5-208ENST00000504489 TTC39BQ5VTQ0 682 aaPredicted RBP12.3□□□□□ -0.44
PDLIM5-208ENST00000504489 FBXL22Q6P050 247 aa12.3□□□□□ -0.44
PDLIM5-208ENST00000504489 ADGRD1Q6QNK2 874 aa12.3□□□□□ -0.44
PDLIM5-208ENST00000504489 C12orf40Q86WS4 652 aa12.3□□□□□ -0.44
PDLIM5-208ENST00000504489 ZNF683Q8IZ20 524 aa12.3□□□□□ -0.44
PDLIM5-208ENST00000504489 PHTF2Q8N3S3 785 aa12.3□□□□□ -0.44
PDLIM5-208ENST00000504489 CCDC185Q8N715 623 aa12.3□□□□□ -0.44
PDLIM5-208ENST00000504489 NAT16Q8N8M0 369 aa12.3□□□□□ -0.44
PDLIM5-208ENST00000504489 ACRBPQ8NEB7 543 aa12.3□□□□□ -0.44
PDLIM5-208ENST00000504489 BHMTQ93088 406 aa12.3□□□□□ -0.44
PDLIM5-208ENST00000504489 MYEOVQ96EZ4 313 aa12.3□□□□□ -0.44
PDLIM5-208ENST00000504489 BTBD6Q96KE9 485 aa12.3□□□□□ -0.44
PDLIM5-208ENST00000504489 PRICKLE1Q96MT3 831 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 192.7 ms