RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, human

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2J3-209	ENST00000504157	TIFAB	Q6ZNK6	161 aa		18.31	■□□□□ 0.52
POLR2J3-209	ENST00000504157	LYSMD3	Q7Z3D4	306 aa		18.31	■□□□□ 0.52
POLR2J3-209	ENST00000504157	UBR7	Q8N806	425 aa		18.31	■□□□□ 0.52
POLR2J3-209	ENST00000504157	FAM71D	Q8N9W8	422 aa		18.31	■□□□□ 0.52
POLR2J3-209	ENST00000504157	RPF2	Q9H7B2	306 aa	Known RBP	18.31	■□□□□ 0.52
POLR2J3-209	ENST00000504157	C10orf88	Q9H8K7	445 aa		18.31	■□□□□ 0.52
POLR2J3-209	ENST00000504157	IQCA1L	A6NCM1	817 aa		18.31	■□□□□ 0.52
POLR2J3-209	ENST00000504157	FAM47E-STBD1	D6RA91	191 aa		18.31	■□□□□ 0.52
POLR2J3-209	ENST00000504157	ZMPSTE24	O75844	475 aa		18.31	■□□□□ 0.52
POLR2J3-209	ENST00000504157	KDELR1	P24390	212 aa		18.31	■□□□□ 0.52
POLR2J3-209	ENST00000504157	EPHA3	P29320	983 aa		18.31	■□□□□ 0.52
POLR2J3-209	ENST00000504157	BMX	P51813	675 aa		18.31	■□□□□ 0.52
POLR2J3-209	ENST00000504157	ARPC4	P59998	168 aa		18.31	■□□□□ 0.52
POLR2J3-209	ENST00000504157	EIF3E	P60228	445 aa	Known RBP	18.31	■□□□□ 0.52
POLR2J3-209	ENST00000504157	PDE1C	Q14123	709 aa	Predicted RBP	18.31	■□□□□ 0.52
POLR2J3-209	ENST00000504157	PHKG1	Q16816	387 aa		18.31	■□□□□ 0.52
POLR2J3-209	ENST00000504157	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	18.31	■□□□□ 0.52
POLR2J3-209	ENST00000504157	MBLAC2	Q68D91	279 aa		18.31	■□□□□ 0.52
POLR2J3-209	ENST00000504157	SMYD5	Q6GMV2	418 aa		18.31	■□□□□ 0.52
POLR2J3-209	ENST00000504157	EEPD1	Q7L9B9	569 aa		18.31	■□□□□ 0.52
POLR2J3-209	ENST00000504157	PPP1R14C	Q8TAE6	165 aa		18.31	■□□□□ 0.52
POLR2J3-209	ENST00000504157	TRUB1	Q8WWH5	349 aa	Known RBP	18.31	■□□□□ 0.52
POLR2J3-209	ENST00000504157	MMP19	Q99542	508 aa		18.31	■□□□□ 0.52
POLR2J3-209	ENST00000504157	ARHGAP28	Q9P2N2	729 aa		18.31	■□□□□ 0.52
POLR2J3-209	ENST00000504157	SMCHD1	A6NHR9	2005 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157		A0A087WXM4	84 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	HNRNPDL	O14979	420 aa	Known RBP	18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	LYPLA1	O75608	230 aa	Predicted RBP	18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	TOM1L1	O75674	476 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	EIF2AK2	P19525	551 aa	Known RBP	18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	CDH5	P33151	784 aa	Predicted RBP	18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	HSD17B4	P51659	736 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	YWHAZ	P63104	245 aa	Known RBP	18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	NDUFA5	Q16718	116 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	KRT80	Q6KB66	452 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	C16orf46	Q6P387	395 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	XKR5	Q6UX68	686 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	CTAGE3P	Q8IX95	158 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	FIBCD1	Q8N539	461 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	FNIP1	Q8TF40	1166 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	POPDC2	Q9HBU9	364 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	TBC1D22B	Q9NU19	505 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	CDC14A	Q9UNH5	594 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	CTDP1	Q9Y5B0	961 aa	Predicted RBP	18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	NOX1	Q9Y5S8	564 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157		H3BMQ9	156 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	ZNF195	O14628	629 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	PLA2G6	O60733	806 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	GSR	P00390	522 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	XRCC1	P18887	633 aa	Predicted RBP	18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	NCF2	P19878	526 aa	Predicted RBP	18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	SLC1A6	P48664	564 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	SERPINB9	P50453	376 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	THOP1	P52888	689 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	PPP2R5D	Q14738	602 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	CYP2A13	Q16696	494 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	UGCG	Q16739	394 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	HADH	Q16836	314 aa	Known RBP	18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	SMUG1	Q53HV7	270 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	FASTKD1	Q53R41	847 aa	Known RBP	18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	XKR9	Q5GH70	373 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	PIGG	Q5H8A4	983 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	FSCB	Q5H9T9	825 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	RSPH3	Q86UC2	560 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	CPNE9	Q8IYJ1	553 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	TMEM35B	Q8NCS4	154 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	BSND	Q8WZ55	320 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	LRRC39	Q96DD0	335 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	COG8	Q96MW5	612 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	PTBP2	Q9UKA9	531 aa	Known RBP	18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	AP4S1	Q9Y587	144 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	UBIAD1	Q9Y5Z9	338 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	SLC30A1	Q9Y6M5	507 aa		18.3	■□□□□ 0.52
POLR2J3-209	ENST00000504157	TMEM150B	A6NC51	233 aa		18.29	■□□□□ 0.52
POLR2J3-209	ENST00000504157	CXorf49	A8MYA2	514 aa	Predicted RBP	18.29	■□□□□ 0.52
POLR2J3-209	ENST00000504157	TMX2-CTNND1	H3BSU7	103 aa		18.29	■□□□□ 0.52
POLR2J3-209	ENST00000504157	PFDN6	O15212	129 aa		18.29	■□□□□ 0.52
POLR2J3-209	ENST00000504157	GH2	P01242	217 aa		18.29	■□□□□ 0.52
POLR2J3-209	ENST00000504157	SSTR3	P32745	418 aa	Predicted RBP	18.29	■□□□□ 0.52
POLR2J3-209	ENST00000504157	GABRB2	P47870	512 aa		18.29	■□□□□ 0.52
POLR2J3-209	ENST00000504157	GSS	P48637	474 aa		18.29	■□□□□ 0.52
POLR2J3-209	ENST00000504157	CDH15	P55291	814 aa		18.29	■□□□□ 0.52
POLR2J3-209	ENST00000504157	CNTN2	Q02246	1040 aa		18.29	■□□□□ 0.52
POLR2J3-209	ENST00000504157	KLF10	Q13118	480 aa		18.29	■□□□□ 0.52
POLR2J3-209	ENST00000504157	TKFC	Q3LXA3	575 aa		18.29	■□□□□ 0.52
POLR2J3-209	ENST00000504157	C16orf89	Q6UX73	402 aa		18.29	■□□□□ 0.52
POLR2J3-209	ENST00000504157	NLGN1	Q8N2Q7	840 aa		18.29	■□□□□ 0.52
POLR2J3-209	ENST00000504157	TERB1	Q8NA31	727 aa		18.29	■□□□□ 0.52
POLR2J3-209	ENST00000504157	FAM84A	Q96KN4	292 aa		18.29	■□□□□ 0.52
POLR2J3-209	ENST00000504157	CTRC	Q99895	268 aa		18.29	■□□□□ 0.52
POLR2J3-209	ENST00000504157	TMEM79	Q9BSE2	394 aa		18.29	■□□□□ 0.52
POLR2J3-209	ENST00000504157	KRBA1	A5PL33	1030 aa		18.29	■□□□□ 0.52
POLR2J3-209	ENST00000504157	FAM155A	B1AL88	458 aa	Predicted RBP	18.29	■□□□□ 0.52
POLR2J3-209	ENST00000504157	DCX	O43602	365 aa		18.29	■□□□□ 0.52
POLR2J3-209	ENST00000504157	TNNI1	P19237	187 aa		18.29	■□□□□ 0.52
POLR2J3-209	ENST00000504157	DCK	P27707	260 aa		18.29	■□□□□ 0.52
POLR2J3-209	ENST00000504157	TKT	P29401	623 aa	Known RBP	18.29	■□□□□ 0.52
POLR2J3-209	ENST00000504157	MAGEA6	P43360	314 aa		18.29	■□□□□ 0.52
POLR2J3-209	ENST00000504157	JAG1	P78504	1218 aa		18.29	■□□□□ 0.52
POLR2J3-209	ENST00000504157	TCP10	Q12799	353 aa		18.29	■□□□□ 0.52

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