RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 ABRQ12979 859 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 CEP68Q76N32 757 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 TMCO2Q7Z6W1 182 aaPredicted RBP6.39□□□□□ -1.39
CLCN3-204ENST00000504131 GPR65Q8IYL9 337 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 LRRC17Q8N6Y2 441 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 REXO5Q96IC2 774 aaKnown RBP6.39□□□□□ -1.39
CLCN3-204ENST00000504131 ELF4Q99607 663 aaPredicted RBP6.39□□□□□ -1.39
CLCN3-204ENST00000504131 C7orf50Q9BRJ6 194 aaKnown RBP6.39□□□□□ -1.39
CLCN3-204ENST00000504131 BLZF1Q9H2G9 400 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 PRKAG3Q9UGI9 489 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 FETUBQ9UGM5 382 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 DNAJC16Q9Y2G8 782 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 SLC30A1Q9Y6M5 507 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 LACTBL1A8MY62 500 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 FOXO6A8MYZ6 492 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 DDX3YO15523 660 aaKnown RBP6.39□□□□□ -1.39
CLCN3-204ENST00000504131 CRCPO75575 148 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 EIF2AK2P19525 551 aaKnown RBP6.39□□□□□ -1.39
CLCN3-204ENST00000504131 TCN1P20061 433 aaPredicted RBP6.39□□□□□ -1.39
CLCN3-204ENST00000504131 CIITAP33076 1130 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 SERPINB9P50453 376 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 TYSND1Q2T9J0 566 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 HSD17B12Q53GQ0 312 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 RAET1GQ6H3X3 334 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 NEPROQ6NW34 567 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 IZUMO2Q6UXV1 221 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 ZCCHC7Q8N3Z6 543 aaKnown RBP6.39□□□□□ -1.39
CLCN3-204ENST00000504131 NR4A3Q92570 626 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 ZBED3Q96IU2 234 aaPredicted RBP6.39□□□□□ -1.39
CLCN3-204ENST00000504131 PPP1R10Q96QC0 940 aaKnown RBP6.39□□□□□ -1.39
CLCN3-204ENST00000504131 BCL7BQ9BQE9 202 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 SLC4A5Q9BY07 1137 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 TMEM138Q9NPI0 162 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 KCNQ5Q9NR82 932 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 EXD2Q9NVH0 621 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 VWDEQ8N2E2 1590 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 PARD3Q8TEW0 1356 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 TMEM238LA0A1B0GVL6 79 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 KCNK1O00180 336 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 TBC1D4O60343 1298 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 MITFO75030 526 aaPredicted RBP6.39□□□□□ -1.39
CLCN3-204ENST00000504131 KDM4BO94953 1096 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 STAU1O95793 577 aaKnown RBP6.39□□□□□ -1.39
CLCN3-204ENST00000504131 FAM153BP0C7A2 387 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 MARK3P27448 753 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 GRK4P32298 578 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 UGT2B15P54855 530 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 MAT1AQ00266 395 aaKnown RBP6.39□□□□□ -1.39
CLCN3-204ENST00000504131 TRAF2Q12933 501 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 C12orf60Q5U649 245 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 IDO2Q6ZQW0 420 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 AACSQ86V21 672 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 NAT8LQ8N9F0 302 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 BPIFCQ8NFQ6 507 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 PELOQ9BRX2 385 aaKnown RBP6.39□□□□□ -1.39
CLCN3-204ENST00000504131 TIMM29Q9BSF4 260 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 TRIM2Q9C040 744 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 GRIP2Q9C0E4 1043 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 ARMT1Q9H993 441 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 ERVMER34-1Q9H9K5 563 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 KCNK13Q9HB14 408 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 TOPORSQ9NS56 1045 aaPredicted RBP6.39□□□□□ -1.39
CLCN3-204ENST00000504131 KLHL11Q9NVR0 708 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 CFAP97Q9P2B7 532 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 RSL24D1Q9UHA3 163 aaKnown RBP6.39□□□□□ -1.39
CLCN3-204ENST00000504131 AK5Q9Y6K8 562 aa6.39□□□□□ -1.39
CLCN3-204ENST00000504131 ARHGEF33A8MVX0 844 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 WWP2O00308 870 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 EML1O00423 815 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 SCGB2A1O75556 95 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 WEE2P0C1S8 567 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 PABPC4LP0CB38 370 aaKnown RBP6.38□□□□□ -1.39
CLCN3-204ENST00000504131 CYP19A1P11511 503 aaPredicted RBP6.38□□□□□ -1.39
CLCN3-204ENST00000504131 PDIA3P30101 505 aaKnown RBP6.38□□□□□ -1.39
CLCN3-204ENST00000504131 CDC34P49427 236 aaPredicted RBP6.38□□□□□ -1.39
CLCN3-204ENST00000504131 GSK3AP49840 483 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 CYP4A11Q02928 519 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 TDGQ13569 410 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 NEDD8Q15843 81 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 CYP4A22Q5TCH4 519 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 RTL3Q8N8U3 475 aaKnown RBP6.38□□□□□ -1.39
CLCN3-204ENST00000504131 RIN2Q8WYP3 895 aaPredicted RBP6.38□□□□□ -1.39
CLCN3-204ENST00000504131 ZNF570Q96NI8 536 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 THUMPD3Q9BV44 507 aaKnown RBP6.38□□□□□ -1.39
CLCN3-204ENST00000504131 GTPBP2Q9BX10 602 aaKnown RBP6.38□□□□□ -1.39
CLCN3-204ENST00000504131 TRIM9Q9C026 710 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 EBF2Q9HAK2 575 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 SNX24Q9Y343 169 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 PCDHGA6Q9Y5G7 932 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 TTC21AQ8NDW8 1320 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 PDE2AO00408 941 aaPredicted RBP6.38□□□□□ -1.39
CLCN3-204ENST00000504131 STX11O75558 287 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 TRMUO75648 421 aaKnown RBP6.38□□□□□ -1.39
CLCN3-204ENST00000504131 STAG3L3P0CL85 134 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 NDUFV2P19404 249 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 RRM2P31350 389 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 RXRGP48443 463 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 RGS6P49758 472 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 HNMTP50135 292 aa6.38□□□□□ -1.39
CLCN3-204ENST00000504131 HADHBP55084 474 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms