RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 RNF34Q969K3 372 aa21.98■■□□□ 1.11
UBE2D3-216ENST00000503742 SCLYQ96I15 445 aa21.98■■□□□ 1.11
UBE2D3-216ENST00000503742 SIGLEC10Q96LC7 697 aa21.98■■□□□ 1.11
UBE2D3-216ENST00000503742 HAPLN3Q96S86 360 aa21.98■■□□□ 1.11
UBE2D3-216ENST00000503742 CYTH2Q99418 400 aa21.98■■□□□ 1.11
UBE2D3-216ENST00000503742 BRD8Q9H0E9 1235 aa21.98■■□□□ 1.11
UBE2D3-216ENST00000503742 PLAC1Q9HBJ0 212 aa21.98■■□□□ 1.11
UBE2D3-216ENST00000503742 XAB2Q9HCS7 855 aaKnown RBP21.98■■□□□ 1.11
UBE2D3-216ENST00000503742 EIF2B3Q9NR50 452 aaKnown RBP21.98■■□□□ 1.11
UBE2D3-216ENST00000503742 IL37Q9NZH6 218 aa21.98■■□□□ 1.11
UBE2D3-216ENST00000503742 NEU3Q9UQ49 428 aa21.98■■□□□ 1.11
UBE2D3-216ENST00000503742 A0A1W2PQH9 124 aa21.97■■□□□ 1.11
UBE2D3-216ENST00000503742 C1QAP02745 245 aa21.97■■□□□ 1.11
UBE2D3-216ENST00000503742 EPHB2P29323 1055 aa21.97■■□□□ 1.11
UBE2D3-216ENST00000503742 SDHAF4Q5VUM1 108 aa21.97■■□□□ 1.11
UBE2D3-216ENST00000503742 FUT10Q6P4F1 479 aa21.97■■□□□ 1.11
UBE2D3-216ENST00000503742 ANKRD33Q7Z3H0 272 aa21.97■■□□□ 1.11
UBE2D3-216ENST00000503742 ZNF567Q8N184 647 aa21.97■■□□□ 1.11
UBE2D3-216ENST00000503742 ZNF784Q8NCA9 323 aaPredicted RBP21.97■■□□□ 1.11
UBE2D3-216ENST00000503742 DCAKDQ8WVC6 231 aa21.97■■□□□ 1.11
UBE2D3-216ENST00000503742 TMEM175Q9BSA9 504 aa21.97■■□□□ 1.11
UBE2D3-216ENST00000503742 IGSF9Q9P2J2 1179 aa21.97■■□□□ 1.11
UBE2D3-216ENST00000503742 FNDC1Q4ZHG4 1894 aaPredicted RBP21.97■■□□□ 1.11
UBE2D3-216ENST00000503742 TBC1D4O60343 1298 aa21.96■■□□□ 1.11
UBE2D3-216ENST00000503742 CCL5P13501 91 aa21.96■■□□□ 1.11
UBE2D3-216ENST00000503742 GALNT2Q10471 571 aa21.96■■□□□ 1.11
UBE2D3-216ENST00000503742 QPCTQ16769 361 aa21.96■■□□□ 1.11
UBE2D3-216ENST00000503742 PARP6Q2NL67 630 aa21.96■■□□□ 1.11
UBE2D3-216ENST00000503742 ARTNQ5T4W7 220 aa21.96■■□□□ 1.11
UBE2D3-216ENST00000503742 MON1AQ86VX9 555 aa21.96■■□□□ 1.11
UBE2D3-216ENST00000503742 MZB1Q8WU39 189 aa21.96■■□□□ 1.11
UBE2D3-216ENST00000503742 HDAC11Q96DB2 347 aa21.96■■□□□ 1.11
UBE2D3-216ENST00000503742 MRRFQ96E11 262 aaKnown RBP21.96■■□□□ 1.11
UBE2D3-216ENST00000503742 B3GALT6Q96L58 329 aa21.96■■□□□ 1.11
UBE2D3-216ENST00000503742 MRPL9Q9BYD2 267 aaKnown RBP21.96■■□□□ 1.11
UBE2D3-216ENST00000503742 FAM107BQ9H098 131 aa21.96■■□□□ 1.11
UBE2D3-216ENST00000503742 RNF208Q9H0X6 261 aa21.96■■□□□ 1.11
UBE2D3-216ENST00000503742 TRABDQ9H4I3 376 aa21.96■■□□□ 1.11
UBE2D3-216ENST00000503742 FBXO44Q9H4M3 255 aa21.96■■□□□ 1.11
UBE2D3-216ENST00000503742 OSER1Q9NX31 292 aa21.96■■□□□ 1.11
UBE2D3-216ENST00000503742 SFMBT1Q9UHJ3 866 aa21.96■■□□□ 1.11
UBE2D3-216ENST00000503742 TTLL3Q9Y4R7 772 aa21.96■■□□□ 1.11
UBE2D3-216ENST00000503742 PIAS1O75925 651 aa21.96■■□□□ 1.11
UBE2D3-216ENST00000503742 GALTP07902 379 aa21.96■■□□□ 1.11
UBE2D3-216ENST00000503742 MLNP12872 115 aa21.96■■□□□ 1.11
UBE2D3-216ENST00000503742 KRT15P19012 456 aa21.96■■□□□ 1.11
UBE2D3-216ENST00000503742 SERPINB6P35237 376 aa21.96■■□□□ 1.11
UBE2D3-216ENST00000503742 GRIA1P42261 906 aa21.96■■□□□ 1.11
UBE2D3-216ENST00000503742 MSH2P43246 934 aa21.96■■□□□ 1.11
UBE2D3-216ENST00000503742 SLC18A1P54219 525 aa21.96■■□□□ 1.11
UBE2D3-216ENST00000503742 PPP2R5DQ14738 602 aa21.96■■□□□ 1.11
UBE2D3-216ENST00000503742 ATAD1Q8NBU5 361 aa21.96■■□□□ 1.11
UBE2D3-216ENST00000503742 PGLYRP2Q96PD5 576 aa21.96■■□□□ 1.11
UBE2D3-216ENST00000503742 HIPK3Q9H422 1215 aa21.96■■□□□ 1.11
UBE2D3-216ENST00000503742 ZC3H7BQ9UGR2 993 aaKnown RBP21.96■■□□□ 1.11
UBE2D3-216ENST00000503742 FAM92AA1XBS5 289 aa21.95■■□□□ 1.1
UBE2D3-216ENST00000503742 PRPF4O43172 522 aaKnown RBP eCLIP21.95■■□□□ 1.13e-7■■□□□ 13.1
UBE2D3-216ENST00000503742 GSTA2P09210 222 aa21.95■■□□□ 1.1
UBE2D3-216ENST00000503742 MX2P20592 715 aa21.95■■□□□ 1.1
UBE2D3-216ENST00000503742 HOXC13P31276 330 aa21.95■■□□□ 1.1
UBE2D3-216ENST00000503742 CCR1P32246 355 aa21.95■■□□□ 1.1
UBE2D3-216ENST00000503742 LRRC14Q15048 493 aa21.95■■□□□ 1.1
UBE2D3-216ENST00000503742 MANEALQ5VSG8 457 aa21.95■■□□□ 1.1
UBE2D3-216ENST00000503742 MSANTD2Q6P1R3 559 aa21.95■■□□□ 1.1
UBE2D3-216ENST00000503742 TTC9BQ8N6N2 239 aa21.95■■□□□ 1.1
UBE2D3-216ENST00000503742 ANKRD42Q8N9B4 389 aa21.95■■□□□ 1.1
UBE2D3-216ENST00000503742 STKLD1Q8NE28 680 aa21.95■■□□□ 1.1
UBE2D3-216ENST00000503742 MGARPQ8TDB4 240 aa21.95■■□□□ 1.1
UBE2D3-216ENST00000503742 CFAP36Q96G28 342 aa21.95■■□□□ 1.1
UBE2D3-216ENST00000503742 CEP41Q9BYV8 373 aa21.95■■□□□ 1.1
UBE2D3-216ENST00000503742 SEPT10Q9P0V9 454 aa21.95■■□□□ 1.1
UBE2D3-216ENST00000503742 NUP205Q92621 2012 aa21.95■■□□□ 1.1
UBE2D3-216ENST00000503742 FAM47DPA6NHR8 397 aa21.94■■□□□ 1.1
UBE2D3-216ENST00000503742 TBKBP1A7MCY6 615 aa21.94■■□□□ 1.1
UBE2D3-216ENST00000503742 TRDMT1O14717 391 aaKnown RBP21.94■■□□□ 1.1
UBE2D3-216ENST00000503742 MSI1O43347 362 aaKnown RBP21.94■■□□□ 1.1
UBE2D3-216ENST00000503742 PAGE1O75459 146 aa21.94■■□□□ 1.1
UBE2D3-216ENST00000503742 PARNO95453 639 aaKnown RBP21.94■■□□□ 1.1
UBE2D3-216ENST00000503742 PTPN3P26045 913 aa21.94■■□□□ 1.1
UBE2D3-216ENST00000503742 STX2P32856 288 aa21.94■■□□□ 1.1
UBE2D3-216ENST00000503742 HTR7P34969 479 aa21.94■■□□□ 1.1
UBE2D3-216ENST00000503742 GARSP41250 739 aaKnown RBP21.94■■□□□ 1.1
UBE2D3-216ENST00000503742 IFNAR2P48551 515 aa21.94■■□□□ 1.1
UBE2D3-216ENST00000503742 MNX1P50219 401 aaPredicted RBP21.94■■□□□ 1.1
UBE2D3-216ENST00000503742 ATN1P54259 1190 aaPredicted RBP21.94■■□□□ 1.1
UBE2D3-216ENST00000503742 USP46P62068 366 aa21.94■■□□□ 1.1
UBE2D3-216ENST00000503742 SARNPP82979 210 aaKnown RBP21.94■■□□□ 1.1
UBE2D3-216ENST00000503742 FAAP100Q0VG06 881 aa21.94■■□□□ 1.1
UBE2D3-216ENST00000503742 ELAVL2Q12926 359 aaKnown RBP21.94■■□□□ 1.1
UBE2D3-216ENST00000503742 KBTBD12Q3ZCT8 623 aa21.94■■□□□ 1.1
UBE2D3-216ENST00000503742 SLC44A1Q8WWI5 657 aa21.94■■□□□ 1.1
UBE2D3-216ENST00000503742 DPF3Q92784 378 aa21.94■■□□□ 1.1
UBE2D3-216ENST00000503742 EBNA1BP2Q99848 306 aaKnown RBP21.94■■□□□ 1.1
UBE2D3-216ENST00000503742 KIF9Q9HAQ2 790 aa21.94■■□□□ 1.1
UBE2D3-216ENST00000503742 TMEM51Q9NW97 253 aa21.94■■□□□ 1.1
UBE2D3-216ENST00000503742 A0A1W2PPM1 405 aa21.94■■□□□ 1.1
UBE2D3-216ENST00000503742 KCNU1A8MYU2 1149 aa21.94■■□□□ 1.1
UBE2D3-216ENST00000503742 KCNK1O00180 336 aa21.94■■□□□ 1.1
UBE2D3-216ENST00000503742 PSMB4P28070 264 aa21.94■■□□□ 1.1
UBE2D3-216ENST00000503742 CCL23P55773 120 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms