RNA–Protein interactions for RNA: ENST00000503638.1

PGGT1B-204, Transcript of protein geranylgeranyltransferase type I subunit beta, humanhuman

TSL 3

Gene PGGT1B, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGGT1B-204ENST00000503638 LRRC31Q6UY01 552 aa13.86□□□□□ -0.19
PGGT1B-204ENST00000503638 SLFN11Q7Z7L1 901 aa13.86□□□□□ -0.19
PGGT1B-204ENST00000503638 RALGPS2Q86X27 583 aaPredicted RBP13.86□□□□□ -0.19
PGGT1B-204ENST00000503638 TMEM139Q8IV31 216 aa13.86□□□□□ -0.19
PGGT1B-204ENST00000503638 LRRC8AQ8IWT6 810 aa13.86□□□□□ -0.19
PGGT1B-204ENST00000503638 RHOT2Q8IXI1 618 aa13.86□□□□□ -0.19
PGGT1B-204ENST00000503638 CFAP52Q8N1V2 620 aa13.86□□□□□ -0.19
PGGT1B-204ENST00000503638 HJURPQ8NCD3 748 aaPredicted RBP13.86□□□□□ -0.19
PGGT1B-204ENST00000503638 RFFLQ8WZ73 363 aa13.86□□□□□ -0.19
PGGT1B-204ENST00000503638 RPRD1AQ96P16 312 aaPredicted RBP13.86□□□□□ -0.19
PGGT1B-204ENST00000503638 TBC1D17Q9HA65 648 aa13.86□□□□□ -0.19
PGGT1B-204ENST00000503638 OSGEPQ9NPF4 335 aa13.86□□□□□ -0.19
PGGT1B-204ENST00000503638 TMPRSS4Q9NRS4 437 aa13.86□□□□□ -0.19
PGGT1B-204ENST00000503638 DNAJC17Q9NVM6 304 aaKnown RBP13.86□□□□□ -0.19
PGGT1B-204ENST00000503638 INTUQ9ULD6 942 aa13.86□□□□□ -0.19
PGGT1B-204ENST00000503638 VANGL2Q9ULK5 521 aa13.86□□□□□ -0.19
PGGT1B-204ENST00000503638 MRPS17Q9Y2R5 130 aaKnown RBP13.86□□□□□ -0.19
PGGT1B-204ENST00000503638 SNX10Q9Y5X0 201 aa13.86□□□□□ -0.19
PGGT1B-204ENST00000503638 KMT2EQ8IZD2 1858 aa13.85□□□□□ -0.19
PGGT1B-204ENST00000503638 KRBA1A5PL33 1030 aa13.85□□□□□ -0.19
PGGT1B-204ENST00000503638 ARHGAP6O43182 974 aa13.85□□□□□ -0.19
PGGT1B-204ENST00000503638 LCA5LO95447 670 aa13.85□□□□□ -0.19
PGGT1B-204ENST00000503638 ZNF252P-AS1Q0IIN9 211 aa13.85□□□□□ -0.19
PGGT1B-204ENST00000503638 GRSF1Q12849 480 aaKnown RBP eCLIP13.85□□□□□ -0.19
PGGT1B-204ENST00000503638 FAM133BQ5BKY9 247 aaKnown RBP13.85□□□□□ -0.19
PGGT1B-204ENST00000503638 MS4A13Q5J8X5 152 aa13.85□□□□□ -0.19
PGGT1B-204ENST00000503638 PIK3R6Q5UE93 754 aa13.85□□□□□ -0.19
PGGT1B-204ENST00000503638 DAB2IPQ5VWQ8 1189 aa13.85□□□□□ -0.19
PGGT1B-204ENST00000503638 RWDD4Q6NW29 188 aaKnown RBP13.85□□□□□ -0.19
PGGT1B-204ENST00000503638 CPXM2Q8N436 756 aa13.85□□□□□ -0.19
PGGT1B-204ENST00000503638 CARNMT1Q8N4J0 409 aa13.85□□□□□ -0.19
PGGT1B-204ENST00000503638 CCDC185Q8N715 623 aa13.85□□□□□ -0.19
PGGT1B-204ENST00000503638 FNIP1Q8TF40 1166 aa13.85□□□□□ -0.19
PGGT1B-204ENST00000503638 AZIN2Q96A70 460 aa13.85□□□□□ -0.19
PGGT1B-204ENST00000503638 MSANTD3Q96H12 275 aa13.85□□□□□ -0.19
PGGT1B-204ENST00000503638 PRRX2Q99811 253 aa13.85□□□□□ -0.19
PGGT1B-204ENST00000503638 P2RY13Q9BPV8 354 aa13.85□□□□□ -0.19
PGGT1B-204ENST00000503638 ZWILCHQ9H900 591 aa13.85□□□□□ -0.19
PGGT1B-204ENST00000503638 ARHGEF38Q9NXL2 777 aa13.85□□□□□ -0.19
PGGT1B-204ENST00000503638 DEC1Q9P2X7 70 aa13.85□□□□□ -0.19
PGGT1B-204ENST00000503638 HS3ST4Q9Y661 456 aa13.85□□□□□ -0.19
PGGT1B-204ENST00000503638 MYO15AQ9UKN7 3530 aa13.84□□□□□ -0.19
PGGT1B-204ENST00000503638 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.84□□□□□ -0.19
PGGT1B-204ENST00000503638 H0Y626 953 aa13.84□□□□□ -0.19
PGGT1B-204ENST00000503638 H0Y858 1186 aa13.84□□□□□ -0.19
PGGT1B-204ENST00000503638 HOXC11O43248 304 aaPredicted RBP13.84□□□□□ -0.19
PGGT1B-204ENST00000503638 TNNT1P13805 278 aa13.84□□□□□ -0.19
PGGT1B-204ENST00000503638 GLULP15104 373 aa13.84□□□□□ -0.19
PGGT1B-204ENST00000503638 ADRA1BP35368 520 aa13.84□□□□□ -0.19
PGGT1B-204ENST00000503638 SLC6A11P48066 632 aa13.84□□□□□ -0.19
PGGT1B-204ENST00000503638 SGSHP51688 502 aa13.84□□□□□ -0.19
PGGT1B-204ENST00000503638 RPS24P62847 133 aaKnown RBP13.84□□□□□ -0.19
PGGT1B-204ENST00000503638 KIF5AQ12840 1032 aa13.84□□□□□ -0.19
PGGT1B-204ENST00000503638 CDH18Q13634 790 aa13.84□□□□□ -0.19
PGGT1B-204ENST00000503638 AUHQ13825 339 aaKnown RBP13.84□□□□□ -0.19
PGGT1B-204ENST00000503638 NAIF1Q69YI7 327 aaPredicted RBP13.84□□□□□ -0.19
PGGT1B-204ENST00000503638 GRAMD4Q6IC98 578 aa13.84□□□□□ -0.19
PGGT1B-204ENST00000503638 C1orf228Q6PIY5 440 aa13.84□□□□□ -0.19
PGGT1B-204ENST00000503638 CIR1Q86X95 450 aaPredicted RBP13.84□□□□□ -0.19
PGGT1B-204ENST00000503638 CENPIQ92674 756 aaPredicted RBP13.84□□□□□ -0.19
PGGT1B-204ENST00000503638 CD101Q93033 1021 aa13.84□□□□□ -0.19
PGGT1B-204ENST00000503638 CHFRQ96EP1 664 aa13.84□□□□□ -0.19
PGGT1B-204ENST00000503638 PRICKLE1Q96MT3 831 aaPredicted RBP13.84□□□□□ -0.19
PGGT1B-204ENST00000503638 NCAPGQ9BPX3 1015 aa13.84□□□□□ -0.19
PGGT1B-204ENST00000503638 FOXQ1Q9C009 403 aa13.84□□□□□ -0.19
PGGT1B-204ENST00000503638 ANLNQ9NQW6 1124 aa13.84□□□□□ -0.19
PGGT1B-204ENST00000503638 ARHGEF4Q9NR80 690 aa13.84□□□□□ -0.19
PGGT1B-204ENST00000503638 GPATCH2LQ9NWQ4 482 aa13.84□□□□□ -0.19
PGGT1B-204ENST00000503638 LCMT1Q9UIC8 334 aa13.84□□□□□ -0.19
PGGT1B-204ENST00000503638 KIF26AQ9ULI4 1882 aaPredicted RBP13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 VPS13AQ96RL7 3174 aa13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 KANSL1LA0AUZ9 987 aa13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 FAM170BA6NMN3 283 aa13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 BUB1O43683 1085 aa13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 CREB3O43889 395 aa13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 GFRA3O60609 400 aa13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 TULP3O75386 442 aa13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 LRCH4O75427 683 aa13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 PROSCO94903 275 aa13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 ENDOD1O94919 500 aa13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 APODP05090 189 aa13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 MIPP30301 263 aa13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 DGKGP49619 791 aa13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 VAV2P52735 878 aa13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 CCDC173Q0VFZ6 552 aa13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 EIF4EBP2Q13542 120 aaPredicted RBP13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 HADHQ16836 314 aaKnown RBP13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 SMTNL2Q2TAL5 461 aa13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 PREPLQ4J6C6 727 aaPredicted RBP13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 ODF2Q5BJF6 829 aa13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 PPP6R3Q5H9R7 873 aaPredicted RBP13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 FYB2Q5VWT5 728 aa13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 FBXL22Q6P050 247 aa13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 TXNDC11Q6PKC3 985 aa13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 NUDT18Q6ZVK8 323 aa13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 C12orf40Q86WS4 652 aa13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 MFN1Q8IWA4 741 aa13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 FAM217AQ8IXS0 508 aa13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 EFCAB3Q8N7B9 438 aa13.83□□□□□ -0.2
PGGT1B-204ENST00000503638 HSPH1Q92598 858 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms