RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 E9PAM4 449 aa21.07■□□□□ 0.96
CDC42SE2-206ENST00000503291 TCP1P17987 556 aaKnown RBP21.07■□□□□ 0.96
CDC42SE2-206ENST00000503291 TACR2P21452 398 aa21.07■□□□□ 0.96
CDC42SE2-206ENST00000503291 ARL4AP40617 200 aa21.07■□□□□ 0.96
CDC42SE2-206ENST00000503291 CDKN2BP42772 138 aa21.07■□□□□ 0.96
CDC42SE2-206ENST00000503291 TFF2Q03403 129 aa21.07■□□□□ 0.96
CDC42SE2-206ENST00000503291 SMAD2Q15796 467 aaKnown RBP21.07■□□□□ 0.96
CDC42SE2-206ENST00000503291 ARTNQ5T4W7 220 aa21.07■□□□□ 0.96
CDC42SE2-206ENST00000503291 PARM1Q6UWI2 310 aa21.07■□□□□ 0.96
CDC42SE2-206ENST00000503291 SPOCD1Q6ZMY3 1216 aa21.07■□□□□ 0.96
CDC42SE2-206ENST00000503291 BPIFB1Q8TDL5 484 aa21.07■□□□□ 0.96
CDC42SE2-206ENST00000503291 COG1Q8WTW3 980 aa21.07■□□□□ 0.96
CDC42SE2-206ENST00000503291 TSC1Q92574 1164 aa21.07■□□□□ 0.96
CDC42SE2-206ENST00000503291 FGF14Q92915 247 aa21.07■□□□□ 0.96
CDC42SE2-206ENST00000503291 EPAS1Q99814 870 aa21.07■□□□□ 0.96
CDC42SE2-206ENST00000503291 COL6A3P12111 3177 aa21.07■□□□□ 0.96
CDC42SE2-206ENST00000503291 EEF2KO00418 725 aaKnown RBP21.07■□□□□ 0.96
CDC42SE2-206ENST00000503291 TRDMT1O14717 391 aaKnown RBP21.07■□□□□ 0.96
CDC42SE2-206ENST00000503291 AMPD2Q01433 879 aa21.07■□□□□ 0.96
CDC42SE2-206ENST00000503291 TFDP3Q5H9I0 405 aa21.07■□□□□ 0.96
CDC42SE2-206ENST00000503291 PTCRAQ6ISU1 281 aaPredicted RBP21.07■□□□□ 0.96
CDC42SE2-206ENST00000503291 LRRC31Q6UY01 552 aa21.07■□□□□ 0.96
CDC42SE2-206ENST00000503291 ZNF683Q8IZ20 524 aa21.07■□□□□ 0.96
CDC42SE2-206ENST00000503291 E2F7Q96AV8 911 aa21.07■□□□□ 0.96
CDC42SE2-206ENST00000503291 MYEOVQ96EZ4 313 aa21.07■□□□□ 0.96
CDC42SE2-206ENST00000503291 PBKQ96KB5 322 aa21.07■□□□□ 0.96
CDC42SE2-206ENST00000503291 CSPG4P5Q96PW8 444 aa21.07■□□□□ 0.96
CDC42SE2-206ENST00000503291 DDX50Q9BQ39 737 aaKnown RBP21.07■□□□□ 0.96
CDC42SE2-206ENST00000503291 ZNF670Q9BS34 389 aa21.07■□□□□ 0.96
CDC42SE2-206ENST00000503291 PHF7Q9BWX1 381 aaPredicted RBP21.07■□□□□ 0.96
CDC42SE2-206ENST00000503291 LINC00597Q9H2U6 94 aa21.07■□□□□ 0.96
CDC42SE2-206ENST00000503291 TBC1D14Q9P2M4 693 aa21.07■□□□□ 0.96
CDC42SE2-206ENST00000503291 F5H5T6 163 aa21.06■□□□□ 0.96
CDC42SE2-206ENST00000503291 H3BRJ5 948 aa21.06■□□□□ 0.96
CDC42SE2-206ENST00000503291 ZNF185O15231 689 aa21.06■□□□□ 0.96
CDC42SE2-206ENST00000503291 CHKAP35790 457 aa21.06■□□□□ 0.96
CDC42SE2-206ENST00000503291 ZNF135P52742 658 aaPredicted RBP21.06■□□□□ 0.96
CDC42SE2-206ENST00000503291 TPI1P60174 286 aa21.06■□□□□ 0.96
CDC42SE2-206ENST00000503291 COPS2P61201 443 aa21.06■□□□□ 0.96
CDC42SE2-206ENST00000503291 TAZQ16635 292 aa21.06■□□□□ 0.96
CDC42SE2-206ENST00000503291 MANEALQ5VSG8 457 aa21.06■□□□□ 0.96
CDC42SE2-206ENST00000503291 VSIG1Q86XK7 387 aa21.06■□□□□ 0.96
CDC42SE2-206ENST00000503291 FAM217AQ8IXS0 508 aa21.06■□□□□ 0.96
CDC42SE2-206ENST00000503291 LGI2Q8N0V4 545 aa21.06■□□□□ 0.96
CDC42SE2-206ENST00000503291 RCOR3Q9P2K3 495 aaPredicted RBP21.06■□□□□ 0.96
CDC42SE2-206ENST00000503291 CEP104O60308 925 aa21.05■□□□□ 0.96
CDC42SE2-206ENST00000503291 KRT10P13645 584 aa21.05■□□□□ 0.96
CDC42SE2-206ENST00000503291 EPHB2P29323 1055 aa21.05■□□□□ 0.96
CDC42SE2-206ENST00000503291 CETN2P41208 172 aa21.05■□□□□ 0.96
CDC42SE2-206ENST00000503291 HCAR3P49019 387 aa21.05■□□□□ 0.96
CDC42SE2-206ENST00000503291 ANKRD20A8PQ5CZ79 823 aa21.05■□□□□ 0.96
CDC42SE2-206ENST00000503291 RWDD4Q6NW29 188 aaKnown RBP21.05■□□□□ 0.96
CDC42SE2-206ENST00000503291 VITQ6UXI7 678 aa21.05■□□□□ 0.96
CDC42SE2-206ENST00000503291 RFX8Q6ZV50 586 aa21.05■□□□□ 0.96
CDC42SE2-206ENST00000503291 KIAA1958Q8N8K9 716 aa21.05■□□□□ 0.96
CDC42SE2-206ENST00000503291 IGSF8Q969P0 613 aa21.05■□□□□ 0.96
CDC42SE2-206ENST00000503291 ELSPBP1Q96BH3 223 aa21.05■□□□□ 0.96
CDC42SE2-206ENST00000503291 HEMGNQ9BXL5 484 aa21.05■□□□□ 0.96
CDC42SE2-206ENST00000503291 PLA2G2FQ9BZM2 168 aa21.05■□□□□ 0.96
CDC42SE2-206ENST00000503291 WNT6Q9Y6F9 365 aa21.05■□□□□ 0.96
CDC42SE2-206ENST00000503291 C2CD4DB7Z1M9 353 aa21.05■□□□□ 0.96
CDC42SE2-206ENST00000503291 DAPK3O43293 454 aa21.05■□□□□ 0.96
CDC42SE2-206ENST00000503291 TSPAN3O60637 253 aa21.05■□□□□ 0.96
CDC42SE2-206ENST00000503291 VCPP55072 806 aaKnown RBP21.05■□□□□ 0.96
CDC42SE2-206ENST00000503291 DNTTIP2Q5QJE6 756 aaKnown RBP21.05■□□□□ 0.96
CDC42SE2-206ENST00000503291 SEL1L2Q5TEA6 688 aa21.05■□□□□ 0.96
CDC42SE2-206ENST00000503291 KAZNQ674X7 775 aa21.05■□□□□ 0.96
CDC42SE2-206ENST00000503291 MFSD6LQ8IWD5 586 aa21.05■□□□□ 0.96
CDC42SE2-206ENST00000503291 CPXM2Q8N436 756 aa21.05■□□□□ 0.96
CDC42SE2-206ENST00000503291 TDRD5Q8NAT2 981 aaKnown RBP21.05■□□□□ 0.96
CDC42SE2-206ENST00000503291 PCDH19Q8TAB3 1148 aa21.05■□□□□ 0.96
CDC42SE2-206ENST00000503291 FAF2Q96CS3 445 aa21.05■□□□□ 0.96
CDC42SE2-206ENST00000503291 RPGRIP1Q96KN7 1286 aa21.05■□□□□ 0.96
CDC42SE2-206ENST00000503291 RPRD1AQ96P16 312 aaPredicted RBP21.05■□□□□ 0.96
CDC42SE2-206ENST00000503291 RNF157Q96PX1 679 aa21.05■□□□□ 0.96
CDC42SE2-206ENST00000503291 KXD1Q9BQD3 176 aa21.05■□□□□ 0.96
CDC42SE2-206ENST00000503291 OSBPL8Q9BZF1 889 aa21.05■□□□□ 0.96
CDC42SE2-206ENST00000503291 MPP6Q9NZW5 540 aa21.05■□□□□ 0.96
CDC42SE2-206ENST00000503291 STIM2Q9P246 746 aa21.05■□□□□ 0.96
CDC42SE2-206ENST00000503291 NEU3Q9UQ49 428 aa21.05■□□□□ 0.96
CDC42SE2-206ENST00000503291 IGLV3-10A0A075B6K4 115 aa21.04■□□□□ 0.96
CDC42SE2-206ENST00000503291 hCG_1818297A0A087WSY0 165 aa21.04■□□□□ 0.96
CDC42SE2-206ENST00000503291 ZNF487B1APH4 448 aa21.04■□□□□ 0.96
CDC42SE2-206ENST00000503291 SLC9A3R1O14745 358 aaPredicted RBP21.04■□□□□ 0.96
CDC42SE2-206ENST00000503291 URI1O94763 535 aaPredicted RBP21.04■□□□□ 0.96
CDC42SE2-206ENST00000503291 PPP2R5EQ16537 467 aa21.04■□□□□ 0.96
CDC42SE2-206ENST00000503291 PUS10Q3MIT2 529 aaKnown RBP21.04■□□□□ 0.96
CDC42SE2-206ENST00000503291 MTSS1LQ765P7 747 aa21.04■□□□□ 0.96
CDC42SE2-206ENST00000503291 ADGRG2Q8IZP9 1017 aa21.04■□□□□ 0.96
CDC42SE2-206ENST00000503291 CFAP52Q8N1V2 620 aa21.04■□□□□ 0.96
CDC42SE2-206ENST00000503291 TBC1D31Q96DN5 1066 aa21.04■□□□□ 0.96
CDC42SE2-206ENST00000503291 MS4A14Q96JA4 679 aa21.04■□□□□ 0.96
CDC42SE2-206ENST00000503291 RPP25Q9BUL9 199 aaKnown RBP21.04■□□□□ 0.96
CDC42SE2-206ENST00000503291 MAK16Q9BXY0 300 aaKnown RBP21.04■□□□□ 0.96
CDC42SE2-206ENST00000503291 DUS2Q9NX74 493 aaKnown RBP21.04■□□□□ 0.96
CDC42SE2-206ENST00000503291 PPARGC1AQ9UBK2 798 aaKnown RBP21.04■□□□□ 0.96
CDC42SE2-206ENST00000503291 NR2E1Q9Y466 385 aa21.04■□□□□ 0.96
CDC42SE2-206ENST00000503291 DRGXA6NNA5 263 aa21.04■□□□□ 0.96
CDC42SE2-206ENST00000503291 GFRA2O00451 464 aa21.04■□□□□ 0.96
CDC42SE2-206ENST00000503291 CES2O00748 559 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms