RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 VAV1P15498 845 aa25.17■■□□□ 1.62
DDX41-202ENST00000503078 RPL26P61254 145 aaKnown RBP25.17■■□□□ 1.62
DDX41-202ENST00000503078 TRIP10Q15642 601 aa25.17■■□□□ 1.62
DDX41-202ENST00000503078 FRMD7Q6ZUT3 714 aa25.17■■□□□ 1.62
DDX41-202ENST00000503078 HIPK4Q8NE63 616 aa25.17■■□□□ 1.62
DDX41-202ENST00000503078 CSPG4P5Q96PW8 444 aa25.17■■□□□ 1.62
DDX41-202ENST00000503078 MAGEB5Q9BZ81 275 aa25.17■■□□□ 1.62
DDX41-202ENST00000503078 MTMR10Q9NXD2 777 aa25.17■■□□□ 1.62
DDX41-202ENST00000503078 LOC100653049A0A140TA62 436 aa25.16■■□□□ 1.62
DDX41-202ENST00000503078 CASQ2O14958 399 aaPredicted RBP25.16■■□□□ 1.62
DDX41-202ENST00000503078 KRT34O76011 436 aa25.16■■□□□ 1.62
DDX41-202ENST00000503078 STAU1O95793 577 aaKnown RBP25.16■■□□□ 1.62
DDX41-202ENST00000503078 SETSIPP0DME0 302 aa25.16■■□□□ 1.62
DDX41-202ENST00000503078 RAG1P15918 1043 aa25.16■■□□□ 1.62
DDX41-202ENST00000503078 MGAT1P26572 445 aa25.16■■□□□ 1.62
DDX41-202ENST00000503078 PRDX6P30041 224 aa25.16■■□□□ 1.62
DDX41-202ENST00000503078 PTPN9P43378 593 aa25.16■■□□□ 1.62
DDX41-202ENST00000503078 SESN2P58004 480 aaPredicted RBP25.16■■□□□ 1.62
DDX41-202ENST00000503078 TBL3Q12788 808 aaKnown RBP25.16■■□□□ 1.62
DDX41-202ENST00000503078 DLG1Q12959 904 aa25.16■■□□□ 1.62
DDX41-202ENST00000503078 MMEL1Q495T6 779 aa25.16■■□□□ 1.62
DDX41-202ENST00000503078 PPM1JQ5JR12 505 aa25.16■■□□□ 1.62
DDX41-202ENST00000503078 TCHHL1Q5QJ38 904 aaPredicted RBP25.16■■□□□ 1.62
DDX41-202ENST00000503078 SDCCAG8Q86SQ7 713 aaPredicted RBP25.16■■□□□ 1.62
DDX41-202ENST00000503078 PHTF2Q8N3S3 785 aa25.16■■□□□ 1.62
DDX41-202ENST00000503078 ARNTL2Q8WYA1 636 aa25.16■■□□□ 1.62
DDX41-202ENST00000503078 NFKBIZQ9BYH8 718 aa25.16■■□□□ 1.62
DDX41-202ENST00000503078 PPP1R1BQ9UD71 204 aaPredicted RBP25.16■■□□□ 1.62
DDX41-202ENST00000503078 COMMD3-BMI1R4GMX3 469 aa25.16■■□□□ 1.62
DDX41-202ENST00000503078 MX2P20592 715 aa25.16■■□□□ 1.62
DDX41-202ENST00000503078 ATXN1P54253 815 aaKnown RBP25.16■■□□□ 1.62
DDX41-202ENST00000503078 ITGA9Q13797 1035 aa25.16■■□□□ 1.62
DDX41-202ENST00000503078 NCBP2-AS2Q69YL0 99 aa25.16■■□□□ 1.62
DDX41-202ENST00000503078 LBX2Q6XYB7 198 aa25.16■■□□□ 1.62
DDX41-202ENST00000503078 NME8Q8N427 588 aa25.16■■□□□ 1.62
DDX41-202ENST00000503078 SLC35F5Q8WV83 523 aa25.16■■□□□ 1.62
DDX41-202ENST00000503078 HAPLN3Q96S86 360 aa25.16■■□□□ 1.62
DDX41-202ENST00000503078 KCTD15Q96SI1 283 aaPredicted RBP25.16■■□□□ 1.62
DDX41-202ENST00000503078 B3GNT5Q9BYG0 378 aa25.16■■□□□ 1.62
DDX41-202ENST00000503078 PDZD7Q9H5P4 517 aa25.16■■□□□ 1.62
DDX41-202ENST00000503078 DPP3Q9NY33 737 aa25.16■■□□□ 1.62
DDX41-202ENST00000503078 ARHGAP26Q9UNA1 814 aa25.16■■□□□ 1.62
DDX41-202ENST00000503078 PEX1O43933 1283 aa25.15■■□□□ 1.62
DDX41-202ENST00000503078 GABBR2O75899 941 aa25.15■■□□□ 1.62
DDX41-202ENST00000503078 TYK2P29597 1187 aa25.15■■□□□ 1.62
DDX41-202ENST00000503078 FSCBQ5H9T9 825 aa25.15■■□□□ 1.62
DDX41-202ENST00000503078 CELF3Q5SZQ8 465 aaKnown RBP25.15■■□□□ 1.62
DDX41-202ENST00000503078 RIOX2Q8IUF8 465 aa25.15■■□□□ 1.62
DDX41-202ENST00000503078 HACE1Q8IYU2 909 aa25.15■■□□□ 1.62
DDX41-202ENST00000503078 COLGALT1Q8NBJ5 622 aa25.15■■□□□ 1.62
DDX41-202ENST00000503078 PIH1D1Q9NWS0 290 aaKnown RBP25.15■■□□□ 1.62
DDX41-202ENST00000503078 GTF2IRD1Q9UHL9 959 aa25.15■■□□□ 1.62
DDX41-202ENST00000503078 TRIP11Q15643 1979 aa25.15■■□□□ 1.62
DDX41-202ENST00000503078 DGKIO75912 1065 aa25.15■■□□□ 1.62
DDX41-202ENST00000503078 COX4I1P13073 169 aa25.15■■□□□ 1.62
DDX41-202ENST00000503078 PHKA2P46019 1235 aa25.15■■□□□ 1.62
DDX41-202ENST00000503078 MTTPP55157 894 aa25.15■■□□□ 1.62
DDX41-202ENST00000503078 PEX6Q13608 980 aa25.15■■□□□ 1.62
DDX41-202ENST00000503078 FAM187BQ17R55 369 aa25.15■■□□□ 1.62
DDX41-202ENST00000503078 KBTBD6Q86V97 674 aa25.15■■□□□ 1.62
DDX41-202ENST00000503078 ZDHHC17Q8IUH5 632 aa25.15■■□□□ 1.62
DDX41-202ENST00000503078 PIP4K2CQ8TBX8 421 aa25.15■■□□□ 1.62
DDX41-202ENST00000503078 NAT9Q9BTE0 207 aa25.15■■□□□ 1.62
DDX41-202ENST00000503078 C11orf84Q9BUA3 381 aaPredicted RBP25.15■■□□□ 1.62
DDX41-202ENST00000503078 EIF2B3Q9NR50 452 aaKnown RBP25.15■■□□□ 1.62
DDX41-202ENST00000503078 TXNDC16Q9P2K2 825 aa25.15■■□□□ 1.62
DDX41-202ENST00000503078 LTBP3Q9NS15 1303 aa25.14■■□□□ 1.62
DDX41-202ENST00000503078 HACD1B0YJ81 288 aa25.14■■□□□ 1.62
DDX41-202ENST00000503078 H3BNX3 289 aa25.14■■□□□ 1.62
DDX41-202ENST00000503078 DCXO43602 365 aa25.14■■□□□ 1.62
DDX41-202ENST00000503078 CPA3P15088 417 aa25.14■■□□□ 1.62
DDX41-202ENST00000503078 GRIA2P42262 883 aa25.14■■□□□ 1.62
DDX41-202ENST00000503078 SNX16P57768 344 aa25.14■■□□□ 1.62
DDX41-202ENST00000503078 PDK3Q15120 406 aa25.14■■□□□ 1.62
DDX41-202ENST00000503078 AMHR2Q16671 573 aa25.14■■□□□ 1.62
DDX41-202ENST00000503078 ACOT1Q86TX2 421 aa25.14■■□□□ 1.62
DDX41-202ENST00000503078 CENPIQ92674 756 aaPredicted RBP25.14■■□□□ 1.62
DDX41-202ENST00000503078 CPB2Q96IY4 423 aa25.14■■□□□ 1.62
DDX41-202ENST00000503078 BTBD9Q96Q07 612 aa25.14■■□□□ 1.62
DDX41-202ENST00000503078 KCNK16Q96T55 309 aa25.14■■□□□ 1.62
DDX41-202ENST00000503078 FAM49BQ9NUQ9 324 aa25.14■■□□□ 1.62
DDX41-202ENST00000503078 MFHAS1Q9Y4C4 1052 aa25.14■■□□□ 1.62
DDX41-202ENST00000503078 FZD9O00144 591 aa25.13■■□□□ 1.61
DDX41-202ENST00000503078 ADCY6O43306 1168 aa25.13■■□□□ 1.61
DDX41-202ENST00000503078 CCDC153Q494R4 210 aa25.13■■□□□ 1.61
DDX41-202ENST00000503078 ANKRD20A4Q4UJ75 823 aa25.13■■□□□ 1.61
DDX41-202ENST00000503078 EFCAB3Q8N7B9 438 aa25.13■■□□□ 1.61
DDX41-202ENST00000503078 RNPEPQ9H4A4 650 aa25.13■■□□□ 1.61
DDX41-202ENST00000503078 PCDHB12Q9Y5F1 795 aa25.13■■□□□ 1.61
DDX41-202ENST00000503078 CDY2AQ9Y6F7 541 aa25.13■■□□□ 1.61
DDX41-202ENST00000503078 CDY1Q9Y6F8 540 aa25.13■■□□□ 1.61
DDX41-202ENST00000503078 A0A1B0GVG6 124 aa25.13■■□□□ 1.61
DDX41-202ENST00000503078 ACAT1P24752 427 aaKnown RBP25.13■■□□□ 1.61
DDX41-202ENST00000503078 GARSP41250 739 aaKnown RBP25.13■■□□□ 1.61
DDX41-202ENST00000503078 ICA1LQ8NDH6 482 aa25.13■■□□□ 1.61
DDX41-202ENST00000503078 KLRG1Q96E93 195 aa25.13■■□□□ 1.61
DDX41-202ENST00000503078 LGMNQ99538 433 aa25.13■■□□□ 1.61
DDX41-202ENST00000503078 COG4Q9H9E3 785 aa25.13■■□□□ 1.61
DDX41-202ENST00000503078 GJA3Q9Y6H8 435 aa25.13■■□□□ 1.61
DDX41-202ENST00000503078 A0A0G2JMZ2 1700 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms