RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 PLCB1Q9NQ66 1216 aa5.41□□□□□ -1.54
HTT-202ENST00000502820 CNTN3Q9P232 1028 aa5.41□□□□□ -1.54
HTT-202ENST00000502820 SNX12Q9UMY4 172 aa5.41□□□□□ -1.54
HTT-202ENST00000502820 C15orf41Q9Y2V0 281 aa5.41□□□□□ -1.54
HTT-202ENST00000502820 LUC7L2Q9Y383 392 aaKnown RBP5.41□□□□□ -1.54
HTT-202ENST00000502820 SRPRBQ9Y5M8 271 aaKnown RBP5.41□□□□□ -1.54
HTT-202ENST00000502820 CLIC4Q9Y696 253 aa5.41□□□□□ -1.54
HTT-202ENST00000502820 ZNF462Q96JM2 2506 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 NOTCH4Q99466 2003 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 NPHP3-ACAD11A0A0J9YXS1 232 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 C2orf78A6NCI8 922 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 SFI1A8K8P3 1242 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 MYO1FO00160 1098 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 O00370 1275 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 ENC1O14682 589 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 RFPL3O75679 317 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 OAZ2O95190 189 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 RTN3O95197 1032 aaPredicted RBP5.4□□□□□ -1.54
HTT-202ENST00000502820 ATP6V1G2O95670 118 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 PIGRP01833 764 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 F11P03951 625 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 ITGAVP06756 1048 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 PRR29P0C7W0 189 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 MYZAPP0CAP1 466 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 MYBL2P10244 700 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 ACADMP11310 421 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 ADH5P11766 374 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 ODC1P11926 461 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 PLCG1P19174 1290 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 ABCB4P21439 1286 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 GLDCP23378 1020 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 DDX6P26196 483 aaKnown RBP eCLIP5.4□□□□□ -1.54
HTT-202ENST00000502820 ANXA13P27216 316 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 NTSR1P30989 418 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 HNRNPH3P31942 346 aaKnown RBP5.4□□□□□ -1.54
HTT-202ENST00000502820 KRT9P35527 623 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 HSPA9P38646 679 aaKnown RBP5.4□□□□□ -1.54
HTT-202ENST00000502820 UBA7P41226 1012 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 GRIA2P42262 883 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 PCBP4P57723 403 aaKnown RBP5.4□□□□□ -1.54
HTT-202ENST00000502820 TNNC1P63316 161 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 ZBED6P86452 979 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 VAC14Q08AM6 782 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 IFRD2Q12894 506 aaPredicted RBP5.4□□□□□ -1.54
HTT-202ENST00000502820 USP4Q13107 963 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 TMED1Q13445 227 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 PNOCQ13519 176 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 CUL4BQ13620 913 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 BLMHQ13867 455 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 ZNF268Q14587 947 aaPredicted RBP5.4□□□□□ -1.54
HTT-202ENST00000502820 LBRQ14739 615 aaKnown RBP5.4□□□□□ -1.54
HTT-202ENST00000502820 DHCR24Q15392 516 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 SPA17Q15506 151 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 ZRSR2Q15696 482 aaKnown RBP5.4□□□□□ -1.54
HTT-202ENST00000502820 ZNF77Q15935 545 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 KIF19Q2TAC6 998 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 SLC10A6Q3KNW5 377 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 INAVAQ3KP66 663 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 TBC1D25Q3MII6 688 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 CFAP221Q4G0U5 840 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 SPDYAQ5MJ70 313 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 RNF187Q5TA31 235 aaPredicted RBP5.4□□□□□ -1.54
HTT-202ENST00000502820 SLC30A9Q6PML9 568 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 NUDT18Q6ZVK8 323 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 SND1Q7KZF4 910 aaKnown RBP eCLIP5.4□□□□□ -1.54
HTT-202ENST00000502820 TRMT11Q7Z4G4 463 aaKnown RBP5.4□□□□□ -1.54
HTT-202ENST00000502820 TMEM150AQ86TG1 271 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 HOOK3Q86VS8 718 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 C12orf40Q86WS4 652 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 LMNTD2Q8IXW0 634 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 ARHGAP18Q8N392 663 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 EID2Q8N6I1 236 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 BEST2Q8NFU1 509 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 OR10T2Q8NGX3 314 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 RASSF8Q8NHQ8 419 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 KCNE4Q8WWG9 221 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 RAD54LQ92698 747 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 BHMTQ93088 406 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 TBC1D31Q96DN5 1066 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 SPDL1Q96EA4 605 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 ZNF419Q96HQ0 510 aaPredicted RBP5.4□□□□□ -1.54
HTT-202ENST00000502820 CDK5RAP3Q96JB5 506 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 ZBTB45Q96K62 511 aaPredicted RBP5.4□□□□□ -1.54
HTT-202ENST00000502820 CNDP2Q96KP4 475 aaKnown RBP5.4□□□□□ -1.54
HTT-202ENST00000502820 CALR3Q96L12 384 aaKnown RBP5.4□□□□□ -1.54
HTT-202ENST00000502820 TRAPPC9Q96Q05 1148 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 PHF12Q96QT6 1004 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 ACOX2Q99424 681 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 OXCT2Q9BYC2 517 aaPredicted RBP5.4□□□□□ -1.54
HTT-202ENST00000502820 HAPLN2Q9GZV7 340 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 THAP9Q9H5L6 903 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 CCDC134Q9H6E4 229 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 SUDS3Q9H7L9 328 aaPredicted RBP5.4□□□□□ -1.54
HTT-202ENST00000502820 GDF3Q9NR23 364 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 CHCHD3Q9NX63 227 aaKnown RBP5.4□□□□□ -1.54
HTT-202ENST00000502820 LARSQ9P2J5 1176 aaKnown RBP5.4□□□□□ -1.54
HTT-202ENST00000502820 KCNG1Q9UIX4 513 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 FBXO2Q9UK22 296 aaPredicted RBP5.4□□□□□ -1.54
HTT-202ENST00000502820 ITGB1BP2Q9UKP3 347 aa5.4□□□□□ -1.54
HTT-202ENST00000502820 CAPN11Q9UMQ6 739 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms