RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 EPHX2P34913 555 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 NOMO3P69849 1222 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 ZNF618Q5T7W0 954 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 NUDT18Q6ZVK8 323 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 ITFG2Q969R8 447 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 RTKNQ9BST9 563 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 KATNAL1Q9BW62 490 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 VANGL2Q9ULK5 521 aa17.62■□□□□ 0.41
HMGXB3-201ENST00000502717 SIGLEC16A6NMB1 481 aa17.61■□□□□ 0.41
HMGXB3-201ENST00000502717 MGAT1P26572 445 aa17.61■□□□□ 0.41
HMGXB3-201ENST00000502717 TMC7Q7Z402 723 aa17.61■□□□□ 0.41
HMGXB3-201ENST00000502717 SPATA33Q96N06 139 aa17.61■□□□□ 0.41
HMGXB3-201ENST00000502717 MECRQ9BV79 373 aa17.61■□□□□ 0.41
HMGXB3-201ENST00000502717 ASNA1O43681 348 aa17.61■□□□□ 0.41
HMGXB3-201ENST00000502717 ANKS1BQ7Z6G8 1248 aa17.61■□□□□ 0.41
HMGXB3-201ENST00000502717 HTR3CQ8WXA8 447 aa17.61■□□□□ 0.41
HMGXB3-201ENST00000502717 SNX19Q92543 992 aa17.61■□□□□ 0.41
HMGXB3-201ENST00000502717 SLCO2A1Q92959 643 aa17.61■□□□□ 0.41
HMGXB3-201ENST00000502717 FAXDC2Q96IV6 333 aa17.61■□□□□ 0.41
HMGXB3-201ENST00000502717 TMEM114B3SHH9 223 aa17.61■□□□□ 0.41
HMGXB3-201ENST00000502717 SUPT3HB4E1H0 165 aa17.61■□□□□ 0.41
HMGXB3-201ENST00000502717 GAS2O43903 313 aaKnown RBP17.61■□□□□ 0.41
HMGXB3-201ENST00000502717 PIGNO95427 931 aa17.61■□□□□ 0.41
HMGXB3-201ENST00000502717 CYP2B6P20813 491 aa17.61■□□□□ 0.41
HMGXB3-201ENST00000502717 SLC22A9Q8IVM8 553 aa17.61■□□□□ 0.41
HMGXB3-201ENST00000502717 GBA2Q9HCG7 927 aaPredicted RBP17.61■□□□□ 0.41
HMGXB3-201ENST00000502717 AAR2Q9Y312 384 aaKnown RBP17.61■□□□□ 0.41
HMGXB3-201ENST00000502717 H3BNX3 289 aa17.61■□□□□ 0.41
HMGXB3-201ENST00000502717 GTF2A2P52657 109 aa17.61■□□□□ 0.41
HMGXB3-201ENST00000502717 RAD23AP54725 363 aa17.61■□□□□ 0.41
HMGXB3-201ENST00000502717 CDC16Q13042 620 aa17.61■□□□□ 0.41
HMGXB3-201ENST00000502717 ORC1Q13415 861 aa17.61■□□□□ 0.41
HMGXB3-201ENST00000502717 LAMC2Q13753 1193 aa17.61■□□□□ 0.41
HMGXB3-201ENST00000502717 APPL2Q8NEU8 664 aa17.61■□□□□ 0.41
HMGXB3-201ENST00000502717 SIX2Q9NPC8 291 aa17.61■□□□□ 0.41
HMGXB3-201ENST00000502717 SQORQ9Y6N5 450 aa17.61■□□□□ 0.41
HMGXB3-201ENST00000502717 TMEM63BQ5T3F8 832 aa17.6■□□□□ 0.41
HMGXB3-201ENST00000502717 ENDOVQ8N8Q3 282 aaKnown RBP17.6■□□□□ 0.41
HMGXB3-201ENST00000502717 PLEKHG4BQ96PX9 1271 aa17.6■□□□□ 0.41
HMGXB3-201ENST00000502717 CYP4F12Q9HCS2 524 aa17.6■□□□□ 0.41
HMGXB3-201ENST00000502717 FBXO28Q9NVF7 368 aa17.6■□□□□ 0.41
HMGXB3-201ENST00000502717 PCDHA11Q9Y5I1 949 aa17.6■□□□□ 0.41
HMGXB3-201ENST00000502717 HK2P52789 917 aa17.6■□□□□ 0.41
HMGXB3-201ENST00000502717 EVX2Q03828 476 aa17.6■□□□□ 0.41
HMGXB3-201ENST00000502717 NR1D2Q14995 579 aa17.6■□□□□ 0.41
HMGXB3-201ENST00000502717 KREMEN1Q96MU8 473 aa17.6■□□□□ 0.41
HMGXB3-201ENST00000502717 FETUBQ9UGM5 382 aa17.6■□□□□ 0.41
HMGXB3-201ENST00000502717 CDH22Q9UJ99 828 aa17.6■□□□□ 0.41
HMGXB3-201ENST00000502717 PDGFRBP09619 1106 aa17.6■□□□□ 0.41
HMGXB3-201ENST00000502717 TMC5Q6UXY8 1006 aa17.6■□□□□ 0.41
HMGXB3-201ENST00000502717 CDH3P22223 829 aa17.6■□□□□ 0.41
HMGXB3-201ENST00000502717 HIRAP54198 1017 aaPredicted RBP17.6■□□□□ 0.41
HMGXB3-201ENST00000502717 DGUOKQ16854 277 aa17.6■□□□□ 0.41
HMGXB3-201ENST00000502717 NKX2-3Q8TAU0 364 aa17.6■□□□□ 0.41
HMGXB3-201ENST00000502717 NKD2Q969F2 451 aaPredicted RBP17.6■□□□□ 0.41
HMGXB3-201ENST00000502717 GLT1D1Q96MS3 346 aa17.6■□□□□ 0.41
HMGXB3-201ENST00000502717 KCTD14Q9BQ13 255 aaPredicted RBP17.6■□□□□ 0.41
HMGXB3-201ENST00000502717 EFR3BQ9Y2G0 817 aa17.6■□□□□ 0.41
HMGXB3-201ENST00000502717 TMX2Q9Y320 296 aa17.6■□□□□ 0.41
HMGXB3-201ENST00000502717 INPP4BO15327 924 aa17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 LGR5O75473 907 aa17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 SLC25A27O95847 323 aa17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 CALCAP01258 141 aa17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 PTPN7P35236 360 aa17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 EFCAB3Q8N7B9 438 aa17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 SLC7A14Q8TBB6 771 aa17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 EBF3Q9H4W6 596 aa17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 CNGB3Q9NQW8 809 aa17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 TUBA8Q9NY65 449 aaPredicted RBP17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 HDAC3O15379 428 aa17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 CAP2P40123 477 aa17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 ACTR3P61158 418 aa17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 ACER1Q8TDN7 264 aa17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 SYT15Q9BQS2 421 aa17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 PACSIN3Q9UKS6 424 aa17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 CAB39Q9Y376 341 aaPredicted RBP17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 ASTN2O75129 1339 aaPredicted RBP17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 DYTNA2CJ06 578 aa17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 C2orf71A6NGG8 1288 aa17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 DDTLA6NHG4 134 aaPredicted RBP17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 PSME3P61289 254 aa17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 PCDH20Q8N6Y1 951 aaKnown RBP17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 SLC4A5Q9BY07 1137 aa17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 CCDC167Q9P0B6 97 aa17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 ADAM28Q9UKQ2 775 aa17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 EME2A4GXA9 379 aaPredicted RBP17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 HACD1B0YJ81 288 aa17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 PYGLP06737 847 aa17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 FGFR3P22607 806 aa17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 AMPD1P23109 780 aa17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 GEMP55040 296 aa17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 TSTA3Q13630 321 aaPredicted RBP17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 DPYSQ14117 519 aa17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 DCAF12L1Q5VU92 463 aa17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 EBNA1BP2Q99848 306 aaKnown RBP17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 THUMPD3Q9BV44 507 aaKnown RBP17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 PRKAG3Q9UGI9 489 aa17.59■□□□□ 0.41
HMGXB3-201ENST00000502717 MPZL3Q6UWV2 235 aa17.58■□□□□ 0.41
HMGXB3-201ENST00000502717 ABRAXAS1Q6UWZ7 409 aa17.58■□□□□ 0.41
HMGXB3-201ENST00000502717 SATL1Q86VE3 508 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms